Clavibacter sepedonicus: CMS1338
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Entry
CMS1338 CDS
T00678
Name
(GenBank) putative substrate-binding transport protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cms
Clavibacter sepedonicus
Pathway
cms02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMS1338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cms02000
]
CMS1338
Transporters [BR:
cms02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CMS1338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
TctC
DUF6491
Motif
Other DBs
NCBI-ProteinID:
CAQ01450
UniProt:
B0RI23
LinkDB
All DBs
Position
complement(1401397..1402563)
Genome browser
AA seq
388 aa
AA seq
DB search
MIPRRSLLALAAAASAAVALAGCAPTTSTQAQAQNHAVTDASGTARVFISGDTNVKALWD
DGIIPAFEKANPGASVTTTLDLHGEHDAQTMATLTSSVQGGSDPGYDLIDAGFTAAAGSG
GLLAPVSADTIPNLATVPDSTVESGGGFGIPYRASSVLLAYDSTKVQTPPKTLADLLSWI
RDNPGQFAYNSPSTGGSGQAFVTTVLDTHVDDATREKMTTGYDQSLESAWDAGFDELKDL
NASMYQGGVYPNGNNQVLDLLGTGAIEMAPVWSDQVITAQKSGTLPPTVKYAQISDPAFT
GSASFLGIPKTAEHADVAQKLADYVLSAEGQGIIASTIAGYPVISLDQVPEDLKAQFASA
DPSTLRPGYYSKMASDMSNLWDQKVPGQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgatcccccgccgttccctcctcgccctcgccgccgccgcgtccgccgcggtcgcgctc
gcgggctgcgctcccaccacgagcacgcaggcccaggcccagaaccacgccgtcaccgac
gcgtcgggcaccgcccgcgtcttcatctccggcgacaccaacgtcaaggccctctgggac
gacgggatcatccccgcgttcgagaaggcgaaccccggtgcgtccgtcaccacgacgctc
gacctccacggcgagcacgacgcgcagaccatggccacgctcacgagctcggtgcagggc
ggatccgaccccggctacgacctcatcgacgcgggcttcaccgctgcggccggctccggc
gggctcctcgcccccgtctcggccgacaccatcccgaacctcgcgaccgtgcctgactcg
acggtcgagtccggcggcggcttcgggatcccctatcgcgcctcctccgtcctgctcgcc
tacgactccacgaaggtgcagaccccgccgaagaccctggcggacctgctctcctggatc
cgggacaaccccggccagttcgcctacaactccccctccaccggcggatccggccaggcc
ttcgtcacgaccgtcctcgacacccacgtcgacgacgccacccgcgagaagatgacgacc
ggctacgaccagtcgctcgagagcgcgtgggacgcgggcttcgacgagctcaaggacctg
aacgcctccatgtaccagggcggcgtctaccccaacggcaacaaccaggtgctcgacctg
ctcggcacgggcgccatcgagatggccccggtctggagcgaccaggtcatcaccgcccag
aagtccggcacgctgccgccgaccgtgaagtacgcgcagatctccgacccggcgttcacc
ggcagcgcgtccttcctcggcatcccgaagacggccgagcacgcggacgtcgcgcagaag
ctggccgactacgtgctctccgccgagggccagggcatcatcgccagcaccatcgcgggc
taccccgtgatctcgctcgaccaggtgcccgaggacctcaaggcccagttcgcctcggcc
gacccgtcgacgctccgccccggctactacagcaagatggcgtcggacatgtcgaacctg
tgggaccagaaggtccccgggcagtga
DBGET
integrated database retrieval system
