Clavibacter sepedonicus: CMS1381
Help
Entry
CMS1381 CDS
T00678
Symbol
rlu
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cms03009
]
CMS1381 (rlu)
Enzymes [BR:
cms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CMS1381 (rlu)
Ribosome biogenesis [BR:
cms03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CMS1381 (rlu)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAQ01492
UniProt:
B0RIK1
LinkDB
All DBs
Position
1449682..1450710
Genome browser
AA seq
342 aa
AA seq
DB search
MGLRLQRATGSRVAVVVRAATVTAAPPAPHRTGRGHPMEHRTMPVPDGLDGQRVDVGLAR
LLGFSRSFAAEVAEAGGVTQDGREAGKSDRLVGGSMLAVSWQPRQEPSVVPLAVPDLGIV
HDDDDIVVVDKPVGVAAHPSVGWTGPTVLGALAAAGFRLSTSGAEERQGIVHRLDAGTSG
LMVVAKTERAYTELKRQFHDREVEKVYHAVVQGHPDPLAGTIDAPIGRHPRSDWKFAVTA
DGKPSVTHYETLEAFRRAALLEVHLETGRTHQIRVHMAAQRHPCVGDAMYGADPTISAQL
GLQRQWLHAMRLDITHPATGDRASFSSTYPADLQHALDVLQD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgggactcaggctccagcgagccacggggtcccgcgtcgccgtcgtcgttcgcgcagcc
accgtcaccgctgcaccgccagcaccgcatcgcaccggaagaggtcacccgatggagcac
cgcaccatgcccgtccccgacggactcgacgggcagcgcgtcgacgtgggcctcgcccgg
ctcctcggcttctcccgcagcttcgcggccgaggtcgcggaggccggcggcgtcacgcag
gacgggcgcgaggccggcaagtccgaccggctcgtcggcggatccatgctcgccgtcagc
tggcagccgaggcaggagccgtcggtcgtgccgctcgcggtccccgacctcggcatcgtg
cacgacgacgacgacatcgtcgtcgtcgacaagcccgtcggcgtcgcggcccacccgagc
gtcggctggaccgggcccaccgtcctcggcgcgctggccgccgccggcttccgcctgagc
acatccggcgcggaggagcggcagggcatcgtgcaccggctggacgcgggcaccagcggc
ctgatggtcgtggccaagaccgagcgcgcctacacggagctcaagcggcagttccacgac
cgcgaggtcgagaaggtctaccacgcggtcgtgcagggtcatccggatccgctcgcgggc
accatcgacgcgcccatcggccgccacccccgcagcgactggaagttcgcggtcaccgcc
gacggcaagccgtccgtcacgcactacgagacgctcgaggcgttccggcgcgcggcgctg
ctcgaggtgcacctggagacgggccgcacccaccagatccgcgtgcacatggccgcccag
cgccacccctgcgtgggcgacgcgatgtacggcgccgaccccaccatctcggcccagctc
ggcctccagcggcagtggctgcacgcgatgcggctcgacatcacgcaccccgccacgggc
gatcgtgcgtcgttctcgagcacctacccggccgacctgcagcacgcgctggacgtcctg
caggactga
DBGET
integrated database retrieval system
