| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III alpha chain
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| KO |
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| Organism |
cms Clavibacter sepedonicus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cms00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMS1382 (dnaE)
03430 Mismatch repair
CMS1382 (dnaE)
03440 Homologous recombination
CMS1382 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cms03032]
CMS1382 (dnaE)
03400 DNA repair and recombination proteins [BR:cms03400]
CMS1382 (dnaE)
Enzymes [BR:cms01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMS1382 (dnaE)
DNA replication proteins [BR:cms03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMS1382 (dnaE)
DNA repair and recombination proteins [BR:cms03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMS1382 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1450787..1454299
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| AA seq |
1170 aa
MPRNDSFVHLHVHSEYSMLDGAARVGPLVQAAAEQGMPAVAITDHGNVFGAFDFWKQAKA
AGVKPIIGTEAYITPGTHRGDRTRIRWGNGGQDDVSGSGAYTHLTMLAETTEGMHNLFRL
SSRASLEGYYFKPRMDRELLSTYAKGLIATTGCPSGEVQTRLRLGQYDEAVKAAADFRDI
FGAENYFCEVMDHGLGIERRIMTDLHRLAKDLGLPLVATNDLHYTHEHDATSHAALLCVQ
SGTTLDDPNRFKFDADEFYLKTAQQMRHLFRDHEEACDNTLLIAERCDVQFNESANYMPR
YPVPEGESEQTWFVKEVERGLVRRYPRGFSDDVRKRADYEVGVIAQMGFPGYFLVVADFI
NWSKENGIRVGPGRGSGAGSMVAYAMGITDLDPLEHGLLFERFLNPDRVSMPDFDVDFDD
RRRGEVIRYVTDKYGDERVAQIVTYGTIKAKQALKDSSRVLGYPFSMGDKLTKAMPPAIM
GKDIPLSGILDTEHPRYREAGDFREVLAMDPEAQKVFETAQGIENLKRQWGVHAAGVIMS
SEPLIDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALNNIESNRGE
KLVLEDLGLDDQGAYDLLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVIALYRPGP
MGANSHTNYALRKNGLQEITPIHPELEEPLREVLGTTHGLIVYQEQVMSVAQKLAGFTLA
QADLLRRAMGKKKKSELDKQFEGFSQGMKDNGYSMAAVKALWDILLPFSDYAFNKAHSAA
YGVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVNESIGFF
AAAGADIRFGLGAVRNVGANVVEALRGARTEQGAFESFDDFLKKVPLPVANKRTVESLIK
AGAFDSLGDTRRALLEVHEGMIDASVSDKRAAMNGQVGFDFDSLWDEPQHARKVPERPEW
AKRDKLAFEREMLGLYVSDHPLAGLEIPLAKLASTGIAELLATDASMDGETVTLAGLLTS
VQHRTARNSGNQYGMVQLEDFGGEITCMFMGKAYQEFAPALQSDTVVVIRGRVSTRDDGM
NIHAFSMFQPDLGQSLGSGPLLISLAENRATTETVMGLNDVLIRHSGDTEVRLQLVKGDS
GRVFEIPYPVTVSADLYGELKSLLGPNCLG |
|---|
| NT seq |
3513 nt +upstreamnt +downstreamnt
gtgccccgcaacgactcgttcgtccacctccacgtccacagcgagtactccatgctcgac
ggggcggcccgcgtcggcccgctcgtgcaggcagcggccgagcaggggatgccggccgtc
gcgatcaccgaccacggcaacgtgttcggcgcgttcgacttctggaagcaggcgaaggcc
gcgggcgtcaagcccatcatcggcaccgaggcgtacatcacaccgggcacccaccgcggc
gaccgcacccgcatccggtggggcaatggcggccaggatgacgtctccggatccggcgcg
tacacgcacctgacgatgctcgccgagacgaccgagggcatgcacaacctgttccggctc
tcgtcgcgcgcctcgctcgagggctactacttcaagccccgcatggaccgggagctcctc
agtacctacgccaagggcctcatcgccaccaccggctgcccgtccggcgaggtgcagacg
cgcctccggctcggccagtacgacgaggccgtgaaggccgccgcggacttccgcgacatc
ttcggggccgagaactacttctgcgaggtcatggaccacgggctcggcatcgagcgccgc
atcatgaccgacctccaccgcctggcgaaggacctcggcctcccgctcgtcgccaccaac
gacctgcactacacgcacgagcacgacgcgacgagccacgcggcgctcctctgcgtccag
tccggcacgacgctcgacgaccccaaccgcttcaagttcgacgccgacgagttctacctg
aagaccgcgcagcagatgcgccacctcttccgcgaccacgaggaggcgtgcgacaacacg
ctcctcatcgccgagcggtgcgacgtccagttcaacgagtccgccaactacatgccgcgc
taccccgtgcccgagggcgagagcgagcagacctggttcgtcaaggaggtcgagcgcggc
ctcgtcaggcgctacccgcgcggcttctccgacgacgtgcgcaagcgtgccgactacgag
gtcggggtcatcgcgcagatgggattcccgggctacttcctcgtcgtcgcggacttcatc
aactggtcgaaggagaacgggatccgcgtgggccccggccgcggatccggcgccggctcg
atggtcgcgtacgccatgggcatcaccgacctcgacccgctggagcacggcctgctgttc
gagcggttcctcaaccccgaccgcgtctccatgcccgacttcgacgtcgacttcgacgac
cgtcgccgcggcgaggtcatccgctacgtgaccgacaagtacggcgacgagcgcgtggcg
cagatcgtcacgtacggcaccatcaaggcgaagcaggcgctgaaggactcgagccgcgtg
ctcggctacccgttctccatgggcgacaagctcaccaaggccatgccgcccgcgatcatg
ggcaaggacatcccgctgtccggcatcctcgacaccgagcacccgcgctaccgcgaggcc
ggcgacttccgcgaggtgctcgcgatggacccggaggcgcagaaggtcttcgagaccgcg
caggggatcgagaacctcaagcgccagtggggcgtgcacgcggccggcgtcatcatgtcg
agcgagccgctcatcgacatcatcccgatcatgaagcgggagcaggacggccagatcgtc
acgcagttcgactaccccgcgtgcgagtcgctcggcctcatcaagatggacttcctgggg
ctgcgcaacctcacgatcatcgacgacgcgctcaacaacatcgagtcgaaccgcggcgag
aagctcgtgctcgaggacctgggcctcgacgaccagggggcgtacgacctgctcgcccgc
ggcgacaccctcggcgtcttccagctcgacggcggtcccatgcgctcgctcctgcgcatg
atgaagcccgacaacttcgaggacatctcggccgtcatcgcgctctaccgccccggcccc
atgggcgcgaactcgcacacgaactacgcgctgcggaagaacgggctgcaggagatcacc
ccgatccacccggagctcgaggagccgctgcgcgaggtgctcggcaccacgcacggcctc
atcgtgtaccaggagcaggtcatgtcggtggcgcagaagctcgcgggcttcacgctcgcg
caggccgacctcctgcggcgcgcgatgggcaagaagaagaagtccgagctcgacaagcag
ttcgagggcttctcgcagggcatgaaggacaacggctactcgatggccgcggtgaaggcg
ctctgggacatcctgctgccgttctccgactacgccttcaacaaggcgcactccgcggcg
tacggcgtcgtctcctactggaccgcctacctcaaggcccattacccggccgagtacatg
gcggcgctgctcacgagcgtcggcgactccaaggacaagatggcgctgtacctcaacgag
tgccgccgcatggggatcaaggtcctcccgccggacgtcaacgagtcgatcggcttcttc
gcggcggccggggccgacatccgcttcgggctgggcgctgtgcgcaacgtcggcgcgaac
gtggtcgaggcgctccgcggcgcccgcaccgagcagggcgcattcgagtcgttcgacgac
ttcctcaagaaggtcccgctgccggtcgccaacaagcggacggtcgagtcgctcatcaag
gccggcgcgttcgactcgctgggcgacacccgccgggcgctgctcgaggtgcacgagggc
atgatcgacgcctccgtcagcgacaagcgcgcggccatgaacgggcaggtcggcttcgac
ttcgacagcctctgggacgagccgcagcacgcgcgcaaggtgcccgagcggcccgagtgg
gcgaagcgcgacaagctcgcgttcgagcgcgagatgctcggcctctacgtctccgaccac
ccgctcgcggggctcgagatcccgctggcgaagctcgcctcgacgggcatcgccgagctg
ctggcgacggacgcgtcgatggacggggagacggtcacgctggccgggctcctcacgagc
gtccagcaccgcaccgcgcggaactcgggcaaccagtacggcatggtgcagctcgaggac
ttcggcggcgagatcacctgcatgttcatgggcaaggcgtaccaggagttcgcgcccgcc
ctccagagcgacaccgtcgtggtgatccgcggccgggtctccacgcgcgacgacggcatg
aacatccacgcgttctcgatgttccagcccgacctcgggcagagcctcggctccgggccc
ctcctcatcagcctcgcggagaaccgggcgaccacggagaccgtcatgggtctcaacgac
gtgctcatccgccactcgggcgacaccgaggtgcggctccagctcgtgaagggcgacagc
gggcgggtgttcgagatcccgtacccggtcacggtgagcgcggacctctacggcgagctc
aagtcgctgctcgggccgaactgcctggggtga |
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