Clavibacter sepedonicus: CMS1561
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Entry
CMS1561 CDS
T00678
Name
(GenBank) putative ABC transporter ATP-binding subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
cms
Clavibacter sepedonicus
Pathway
cms02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMS1561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cms02000
]
CMS1561
Transporters [BR:
cms02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CMS1561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_29
AAA
Mg_chelatase
AAA_16
NB-ARC
TsaE
DUF87
nSTAND1
FtsK_SpoIIIE
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAQ01672
UniProt:
B0RBD1
LinkDB
All DBs
Position
1641400..1643112
Genome browser
AA seq
570 aa
AA seq
DB search
MSDVVSIRDLGVTFATDGGDVRAVDGVSLTVSPGEILAIVGESGSGKSVTARTILGLLPD
TAVTDGAVLLSDRKGAGAVDVLSISADQLRQARGRDVAMVFQEPSTALNPVHTVGWQIVE
GLRAHGRVSKKEGRAKAIDILRRVGIPDPETRVDHYPHQFSGGQKQRVVIAMALVLDPGL
IVADEPTTALDVTVQAEILDLLRRCRDEFGAAVILITHNMGVVADLADRVAVMYRSRLVE
QADVATLFASPKEEYTRNLLASVPKLGEGVAATVERAAVRTRARAASATEAAPVVVAKGL
EIEYPGRLGSPAFRAVKGVDLRIEAGEVLGLVGESGSGKTTIGRAIAGLTNVTGGSLRVL
GTEMLGVRERDFRTQRADIGFVFQDPATSFNPRLTIAECVAEPLIVHGRARSPQAARARV
DELMEAVQLPKAFGDRYPHELSGGQRQRASLARALALEPSLLVADEPTSALDVSVQARVL
ELFAELQRELGFAALFISHDLAVVDLLADRIAVLYRGELVEEGTGAEVLGNPQHPYTQRL
LASLPVPDPAEQAERRARLHALRAAERTAG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcgtctccatccgcgacctcggcgtcaccttcgcgaccgacggcggcgac
gtccgcgcggtcgacggggtgtccctgaccgtgtcgcccggcgagatcctcgccatcgtg
ggggagtcggggtcgggcaagtccgtcaccgcccgcacgatcctcggcctcctgccggac
acggccgtcaccgacggggccgtgctcctcagcgaccggaagggcgcgggcgcggtcgac
gtgctgtccatctccgccgaccagctgcgccaggcgcgcggccgcgacgtggcgatggtg
ttccaggagccgtcgacggcgctgaaccccgtgcacacggtgggctggcagatcgtcgag
ggcctgcgcgcccacggccgcgtctcgaagaaggagggccgcgcgaaggcgatcgacatc
ctccgccgcgtcggcatcccggatcccgagacccgggtcgaccactacccgcaccagttc
tcgggcgggcagaagcagcgcgtggtcatcgcgatggcgctcgtcctggatcccggcctc
atcgtcgccgacgagcccaccaccgctctcgacgtgaccgtgcaggcggagatcctcgac
ctgctgcgccgctgccgcgacgagttcggagcggccgtcatcctcatcacgcacaacatg
ggcgtcgtggccgacctcgccgaccgcgtggccgtcatgtaccgctcgcggctcgtggag
caggccgacgtcgccacgctcttcgcgtcgccgaaggaggagtacaccaggaacctcctg
gcgtccgtcccgaagctcggcgagggcgtcgccgcgacggtggagcgcgccgcggtgcgc
acccgcgcgcgggcggcgtcggccaccgaggcggcccccgtggtcgtcgcgaaggggctc
gagatcgagtacccggggcgcctggggagcccggcgttccgcgccgtcaagggcgtggac
ctgcgcatcgaggccggcgaggtcctcgggctcgtgggggagtcgggctcgggcaagacc
accatcggccgcgccatcgcgggcctgaccaacgtgaccggcggatccctccgggtcctc
ggcaccgagatgctcggcgtgcgggagcgcgacttccgcacgcagcgcgccgacatcggg
ttcgtgttccaggatccggcgacgagcttcaacccgcgcctcaccatcgccgagtgcgtg
gccgagccgctcatcgtgcacggacgcgcgaggtccccgcaggccgcgcgcgcccgcgtc
gacgagctgatggaagcggtgcagctgccgaaggccttcggcgaccgctacccgcacgag
ctctccggcggtcagcgccagcgcgcgagcctcgcccgcgccctcgcgctcgagccgagc
ctgctggtggccgacgagcccacgagcgcgctcgacgtgtcggtgcaggcgcgcgtgctg
gagctcttcgccgaactgcagcgcgagctcgggttcgcggcgctcttcatcagccacgac
ctggccgtggtcgacctgctcgccgaccggatcgccgtgctctaccgcggtgagctggtg
gaggaggggacgggcgccgaggtgctggggaacccgcagcacccgtacacgcagcgcctc
ctcgcgtcgctgcccgtcccggatcccgcggagcaggccgagcgccgcgcccggctgcac
gcgctgcgggccgccgagcggaccgccggctga
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