Clavibacter sepedonicus: CMS1633
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Entry
CMS1633 CDS
T00678
Symbol
gyrB
Name
(GenBank) putative DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cms
Clavibacter sepedonicus
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cms03032
]
CMS1633 (gyrB)
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS1633 (gyrB)
Enzymes [BR:
cms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CMS1633 (gyrB)
DNA replication proteins [BR:
cms03032
]
Prokaryotic type
DNA Topoisomerases
CMS1633 (gyrB)
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMS1633 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
CAQ01743
UniProt:
B0RC15
LinkDB
All DBs
Position
1719335..1721413
Genome browser
AA seq
692 aa
AA seq
DB search
MAASDYSARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALGGHGDLID
VRLHPDGSVEVRDTARGVPVDIEPKTGLSGVEVVFTKLHAGGKFGSGSYASSGGLHGVGA
SVVNALSERLDVEVDRGGKTYAMSFRRGEPGIFEDQGEASPDAPFRPFTSGSELRVVGKV
RKGVTGTRIRYWADRQIFTRGASFLTEELLGRARQTAFLVPGLSIDIKDLRGEQPVRESF
RFDGGIAEFVDHLAVDAPLTDTWRLEGSGTFTETVPVLTDGGAMVPTELTRECAVDIALR
WGTGYDTRFKSFVNIIATPKGGTHQAGFEAGLLKFVRAQVEANARKLKVGTDKLEKDDVL
AGLTAVLTVRFPEPQFEGQTKEVLGTPAVRAIVSQVVQKAMADRFASPRREDKAQTAVLL
EKVVGEMKSRISARTHKETQRRKNALESSSLPAKLVDCRSNDVANSELFIVEGDSALGTA
KLARDSEYQALLPIRGKILNVQKASLPDMLSNTECASIIQVLGAGSGRTFDLSAARYGKI
IIMSDADVDGAHIRTLLLTLFFRYMRPMIDEGRVFAAVPPLHRVVVMNPGSKPNDVIYTY
SERELAAVLAQAKRQGKRYQDPIQRYKGLGEMGADQLATTTMDRRNRTLRRVRVDDAEAA
TRMFELLMGNDVAPRKEFIIDGAGSVRDRIDV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcatccgattattccgcccgccacctctccgtcctcgagggcctcgaggcggtg
cgcaagcggcccggcatgtacatcggatccaccgactcgcgcggcctcatgcactgcctc
tgggagatcatcgacaacagcgtcgacgaggcgctcggcgggcacggcgacctgatcgac
gtgcggctccaccccgacggcagcgtcgaggtgcgcgacaccgcgcgcggcgtcccggtc
gacatcgagcccaagaccgggctgtccggcgtcgaggtcgtcttcaccaagctgcacgcc
ggcggcaagttcggatccggctcgtacgcgtcctcgggcggcctgcacggcgtgggcgcg
tccgtcgtgaacgccctgtcggagcgcctcgacgtcgaggtggaccgcggcggcaagacg
tacgccatgtccttccgacgcggcgagccgggcatcttcgaggaccagggggaggcgagc
cccgacgcgccgttccgccccttcacgtccggcagcgagctgcgggtcgtgggcaaggtg
cgcaagggcgtcaccggcacgcggatccgctactgggccgaccggcagatcttcacccgc
ggcgcgtccttcctcaccgaggagctcctcggccgcgcgcgccagaccgcgttcctcgtg
cccgggctcagcatcgacatcaaggacctgcgcggcgagcagcccgtgcgcgagtccttc
cggttcgacggcgggatcgcggagttcgtcgaccacctggccgtcgacgcgccgctgacg
gacacctggcggctcgagggatccggcacgttcaccgagacggtgcccgtcctcacggac
ggcggggccatggtgccgaccgagctcacccgagagtgcgccgtcgacatcgcgctccgc
tggggcacggggtacgacacccggttcaagtcgttcgtcaacatcatcgccacgcccaag
ggcggcacccaccaggcaggcttcgaggcgggcctgctcaagttcgtgcgcgcgcaggtc
gaggccaacgcgcggaagctcaaggtcggcaccgacaagctcgagaaggacgacgtgctc
gcgggcctcaccgccgtgctcacggtgcgcttccccgagccgcagttcgagggccagacc
aaggaggtgctcggcacgccggccgtccgcgccatcgtgtcgcaggtcgtgcagaaggcc
atggccgaccgcttcgcgtcgccgcgccgcgaggacaaggcgcagaccgccgtgctcctc
gagaaggtcgtgggggagatgaagtcgcgcatctcggcccggacccacaaggagacccag
cggcggaagaacgccctcgagagctcgtcgctcccggcgaagctcgtggactgccgctcg
aacgacgtcgccaacagcgagctcttcatcgtcgagggcgactcggcgctcggcacggcg
aagctcgcgcgcgacagcgagtaccaggcgctgctgcccatccgcggcaagatcctgaac
gtgcagaaggcgtcgctgcccgacatgctctccaacaccgagtgcgcgtcgatcatccag
gtgctgggcgcgggatccggccgcacgttcgacctgtcggcggcgcgctacgggaagatc
atcatcatgagcgacgccgatgtcgacggcgcccacatccgcacgctgctgctcacgctc
ttcttccgctacatgcggccgatgatcgacgagggccgcgtgttcgccgcggtgccgccg
ctgcaccgcgtcgtggtcatgaaccccggctcgaagcccaatgacgtgatctacacctac
tcggagcgcgagctggcggccgtgctcgcccaggcgaagcggcagggcaagcgctaccag
gacccgatccagcggtacaagggcctgggggagatgggcgccgaccagctggcgacgacc
accatggaccggcgcaaccgcacgctccggcgcgtgcgggtcgatgacgccgaggccgcc
acgcgcatgttcgagctgctgatgggcaacgacgtcgcaccccgcaaggagttcatcatc
gacggcgccggatccgtgcgggaccgcatcgacgtgtga
DBGET
integrated database retrieval system
