Clavibacter sepedonicus: CMS1891
Help
Entry
CMS1891 CDS
T00678
Name
(GenBank) putative DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03420
Nucleotide excision repair
cms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMS1891
03430 Mismatch repair
CMS1891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS1891
Enzymes [BR:
cms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMS1891
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMS1891
MMR (mismatch excision repair)
Other MMR factors
CMS1891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CAQ01993
UniProt:
B0RE31
LinkDB
All DBs
Position
complement(2003521..2005443)
Genome browser
AA seq
640 aa
AA seq
DB search
MTDQLVPGTPGRDPYGSAAPGALPAPVSLGPATATADEVEVEAPSAESLLEALDDQQRLA
AQALLGPVVVLAGAGTGKTRAITHRIAYGIQAGVYPPNRVMALTFTSRAAAELRGRLREL
GAGPVAARTFHAAALKQLNFFWPQVVGGTMPRLIESKGRMLGHAAESLRLRLDTAALRDM
AAEVEWRKVSMISVEEYGLAARTSRTLPPQLDADQAVALLQAYEDIKDQRRQLDFEDVLL
ATAGMIEAEPWVAQQVREQYRFFVVDEYQDVSPLQQTILDLWMGDRRDLCVVGDASQTIY
SFAGAKSAYLLDFASRFPEATVVRLERNYRSTSGITEAANRLMRGRPGALTLVSADADPD
GDGTGASSARATKGRGSAAVPGRGEGFRAPQVSAFPSDGAEARAIAGAIAQQISSGIAPE
DIAVLYRMNGQSAVLEQALGDAGVSYQVRGSQRFFDRPEIKQALLALRGASVSISGEPLF
KSVSDVLRGLGWSQQPPEQQGAVRDRWESLDAIMGLAERMPAGSTFRAFTDELLERQAGQ
HEPTVSAVTLATLHSAKGLEWEHVYLMGLSEGLVPISYAQTLEAVDEERRLLYVGITRAR
SGLRLSWSRSGPHRSGQREPSRFLAELDTRIAGGGAKRGA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccagctcgtccccggcacgcccgggcgcgacccctacgggtccgctgcgccc
ggcgccctgccggctcccgtctccctcggccccgctaccgcgaccgcggacgaggtcgag
gtcgaggcgccgtccgcggagtccctgctcgaggccctcgacgaccagcagcgcctcgcc
gcgcaggcgctcctcggccccgtcgtcgtcctcgcgggcgccggcaccggcaagacgcgg
gccatcacgcaccgcatcgcctacgggatccaggcgggcgtctacccgcccaaccgcgtg
atggcgctgaccttcacgtcgcgcgccgcggccgagctgcgggggcgcctgcgcgagctc
ggcgccggtcccgtcgcggcccgcaccttccacgccgcggccctcaagcagctcaacttc
ttctggccgcaggtggtcggcggcaccatgcctcgtctcatcgagagcaaggggcgcatg
ctcgggcacgccgccgagtccctccgcctccgcctcgacaccgccgccctccgcgacatg
gccgccgaggtcgagtggcgcaaggtctcgatgatctccgtcgaggagtacggcctcgcc
gcgcgcacgagccggacgctgcccccgcagctcgacgccgaccaggccgtggcgctgctc
caggcctacgaggacatcaaggaccagcgccgccagctcgacttcgaggacgtgctgctc
gccaccgcgggcatgatcgaggcggagccctgggtcgcacagcaggtgcgcgagcagtac
cgcttcttcgtggtcgacgagtaccaggacgtctcgccgctgcagcagacgatcctcgac
ctctggatgggcgaccgccgcgacctctgcgtggtcggcgacgcgagccagaccatctac
tcgttcgcgggcgccaagagcgcgtacctcctcgacttcgcgtcgcgcttccccgaggcc
accgtcgtgcggctggagcggaactaccggtcgacctcgggcatcacggaggcggcgaac
cggctgatgcgcgggcggcccggcgcgctcacgctcgtctcggcggacgcggatcccgac
ggcgacggcacgggcgcgtcttccgcccgcgccaccaagggccgcggatccgccgcggtg
cccggccgcggcgagggcttccgcgcgccgcaggtgagcgcgttcccgtcggacggcgcc
gaggcccgggccatcgccggcgccatcgcccagcagatctcctcgggcatcgcgccggag
gacatcgccgtgctctaccgcatgaacggccagtcggcggtgctcgagcaggcgctcggt
gacgcgggcgtgagctaccaggtgcgcggatcccagcgcttcttcgaccgccccgagatc
aagcaggcgctcctcgcgctccgcggcgcgtccgtctccatctccggcgagccgctgttc
aagtcggtgagcgacgtgctccgcggcctcggctggagccagcagccgcccgagcagcag
ggcgccgtgcgcgaccgctgggagtccctcgacgcgatcatgggcctcgccgagcggatg
cccgcgggcagcacctttcgagccttcaccgacgagctgctcgagcgccaggccggccag
cacgagcccaccgtctccgcggtcacgctcgcgacgctgcactccgccaagggcctcgag
tgggagcacgtctacctgatggggctcagcgaggggctcgtgcccatcagctacgcgcag
acgctcgaggcggtcgacgaggagcggcgcctcctctacgtggggatcacccgcgcgcgg
tccgggctccggctgtcctggagccggagcggaccgcaccgatcgggtcaacgggagccg
tcgcggttcctggcagagctcgacacccgcatcgcgggtgggggcgcgaagcgcggcgcg
tga
DBGET
integrated database retrieval system
