Clavibacter sepedonicus: CMS1899
Help
Entry
CMS1899 CDS
T00678
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
cms
Clavibacter sepedonicus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
HEM4
CMS1
Motif
Other DBs
NCBI-ProteinID:
CAQ02001
UniProt:
B0RE39
LinkDB
All DBs
Position
2015726..2017288
Genome browser
AA seq
520 aa
AA seq
DB search
MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLI
QRLGLTPEPGVQALVVVPTRELAVQVTEDLQIATKHRATTVVSIYGGKAYEGQIEQLKAG
AQIVVGTPGRLLDLVGQRLLSLKYVREMVLDEADKMLDLGFLSDIEKLFAQTPAVRHTML
FSATMPGPIVALARRFMTKPIHIRATDPDEGLMQANIRHLVYRAHNMDKDEVIGRILQAE
GRGKTVIFTRTKRAAARLVEELNDRGFNAAAVHGDLNQEQRERAMAAFKAGKKDILIATD
VAARGIDVLDVTHVINHTIPEDDKAYLHRVGRTGRAGKTGIAVTFVDWDDLHKWALINRA
LEFGQPEPTETYSSSPHLFTDLDIPAGSKGRLRATPTVNPDGTPRERPGSRGGDSGRDGG
RGGSRDGGRGGDRGGDRSGGRSSSSSSTSTSSGGGDRDRSRSRSTSTASATAPADATATI
GSEQPNTAGGHDAPHADGQTRPRSRNRRRRSGGDRPTATS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgactttcaccgaactgaacatcgacgaggacatggtgcaggcgctggccgaccacggc
atcctcgaacccttccccatccaggagcagaccatccccctggcgctctccggccaggac
atcatcggccaggccaagacgggcaccggcaagaccttcggcttcggcctcccgctcatc
cagcggctcggcctcacccccgagcccggcgtgcaggccctcgtggtcgtgccgacgcgc
gagctcgccgtgcaggtcaccgaggacctgcagatcgccaccaagcaccgcgccaccacg
gtcgtctccatctacggcggcaaggcgtacgagggacagatcgagcagctcaaggccggc
gcgcagatcgtcgtcggcacgccgggccgtctcctcgacctcgtgggccagcgcctgctc
tcgctcaagtacgtgcgcgagatggtgctcgacgaggctgacaagatgctcgacctcggc
ttcctctccgacatcgagaagctcttcgcgcagaccccggccgtgcgccacacgatgctg
ttctcggccaccatgccgggcccgatcgtcgcgctcgcccgccgcttcatgacgaagccg
atccacatccgggccacggaccccgacgagggcctcatgcaggcgaacatccgccacctc
gtctaccgcgcgcacaacatggacaaggacgaggtcatcggccgcatcctccaggccgag
ggccgcggcaagaccgtgatcttcacgcgcaccaagcgcgccgccgcccggctcgtcgag
gagctcaacgaccgcggcttcaacgccgccgccgtgcacggcgacctcaaccaggagcag
cgcgagcgcgccatggctgcgttcaaggcgggcaagaaggacatcctcatcgccaccgac
gtggcggcgcgcggcatcgacgtgctcgacgtcacccacgtcatcaaccacaccatcccc
gaggacgacaaggcgtacctgcaccgcgtcgggcgcaccggccgcgcgggcaagacgggc
atcgccgtcacgttcgtcgactgggacgacctgcacaagtgggcgctcatcaaccgcgcc
ctcgagttcggccagccggagcccaccgagacgtactcgtcctcgccgcacctgttcacc
gacctcgacatcccggccggatccaagggccgcctccgcgcgacccccacggtcaacccc
gacggcacgccgcgcgagcgcccgggcagccgcggcggcgactcgggtcgcgacggcggc
cgcggcggaagccgtgacggcggacgcggcggcgaccggggcggggaccgctcgggcgga
cgctcgtcgtcgtcctcctccacctccacctcctccgggggcggcgaccgcgaccgctcg
cgcagccgcagcacgtcgaccgcctcggccaccgcacccgcggacgcgaccgcgacgatc
ggcagcgagcagccgaacacggcgggcggccacgacgcgccccacgccgacggccagacc
cgcccgcgctcgcgcaaccgccgtcgccgctcgggcggcgatcgcccgaccgcgacgtcc
tag
DBGET
integrated database retrieval system
