Clavibacter sepedonicus: CMS1959
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Entry
CMS1959 CDS
T00678
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03030
DNA replication
cms03430
Mismatch repair
cms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMS1959
03430 Mismatch repair
CMS1959
03440 Homologous recombination
CMS1959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cms03032
]
CMS1959
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS1959
Enzymes [BR:
cms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMS1959
DNA replication proteins [BR:
cms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMS1959
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMS1959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Tenui_N
Motif
Other DBs
NCBI-ProteinID:
CAQ02056
UniProt:
B0REG4
LinkDB
All DBs
Position
2072620..2073321
Genome browser
AA seq
233 aa
AA seq
DB search
MSSRWHDTLASFDLETTGVDVETARIVTACIVVLDAQGEVVERHDWLADPGVEIPAGAAA
IHGVTTERARAEGRDAGAVVLEIVTTIREMFARGLALVVYNAPYDLTLLNREAVRHGVEP
LRDTGPVIDPLVIDKAVDTYRRGKRTLSVAAEHYGVRLDDAHDAGADAIAAGRVAQAIAG
RYADQLDIPVLDLHDRQVDWSRVQAESFQDYMRRTRDPAFTTSGAWPERHVGA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgctggcacgacaccctggcctcgttcgacctcgagacgacgggggtggac
gtcgagaccgcgcgcatcgtcacggcgtgcatcgtcgtgctcgacgcacagggcgaggtc
gtcgagcggcacgactggctcgcggatcccggcgtcgagatccccgcgggcgcagcggcc
atccacggcgtcacgacggagcgcgcccgggccgagggtcgcgacgccggcgcggtcgtc
ctcgagatcgtcaccaccatccgcgagatgttcgcgcgcggtctcgcgctcgtcgtctac
aacgcgccctacgacctcacgctcctcaaccgcgaggccgtgcgccacggggtcgagccg
ctgcgcgacaccggccccgtcatcgacccgctcgtcatcgacaaggccgtggacacctac
cgccgcggcaagcgcaccctgtccgtcgccgccgagcactacggcgtccggctcgacgac
gcgcacgacgcgggcgcggacgccatcgcggccggccgggtcgcccaggccatcgcgggg
cgctacgccgaccagctcgacatccccgtcctcgacctgcacgaccgccaggtcgactgg
tcgcgcgtgcaggcggagagcttccaggactacatgcggcgcacgcgggatcccgccttc
acgacctccggcgcctggcccgagcggcacgtcggcgcctag
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