Clavibacter sepedonicus: CMS1993
Help
Entry
CMS1993 CDS
T00678
Symbol
uvrA
Name
(GenBank) ABC excision nuclease subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cms
Clavibacter sepedonicus
Pathway
cms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMS1993 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS1993 (uvrA)
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMS1993 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMS1993 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CAQ02090
UniProt:
B0REJ8
LinkDB
All DBs
Position
complement(2106935..2109856)
Genome browser
AA seq
973 aa
AA seq
DB search
MSISPVESSSLLSVRGARVHNLRDVDLDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIFDYMRLLW
ARIGVAHCPVCGERISRQTVQQIADQLMELETGTRYQIVSPIVSQKKGEFVDLFAELASG
GYSRAIVDGELIQLSSPPKLKKQYKHDISVVVDRLVASDDILGRLTDSLETALRLTDGIV
MIDFVDVDGPGGLQTYSEKLSCPNNHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
QELLIGDESLSIADGVILPWTTQGKGLFQYYEKLLAGLARDLKFSLTTPWRKLSEEVREA
VLRGNDFEVQVKWKNRYGREMTYSSGFEGVMPYIERQFAQAETDNQRARWGEYLREIPCP
VCDGKRLKPEVLAVLVHGANIADVAEMSLSDAQEFMAQLELTDREAHIAAQVLREIRVRL
EFLIEVGLNYLNLARAAASLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IETLVKLRDLGNTLIVVEHDEDTIRTADWIVDIGPGAGVNGGKVVHSGSYEGLIENRESL
TGDYLAGRRAIATPAKRRKIDKKRQIQVVGARANNLQNVTATFPLGTLTAVTGVSGSGKS
SLVNDILYRVLANELNGARKVPGKHSRVTGLENLDKVVHVDQNPIGRTPRSNPATYTGVF
DRIRNLFAETTEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
ARYNRDTLSVHYKGKSIAEVLDMSISEAAEFFEPIQAIHRFMKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLSTELQRRSNGRSIYVLDEPTTGLHFEDVRKLLLVLNGLVDKGNTVIVI
EHNLDVIKSADWLIDMGPEGGAGGGTVLATGTPEHLATVPESYTGGFLKEVLDAEAEAAA
IESQRAREERAAG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatctcccccgtcgagtcctcctccctcctgagcgtgcgcggcgctcgcgtccac
aacctccgcgacgtcgacctcgacatcccgcgcgactcgctcgtcgtcttcacgggcctg
tcggggtccggcaagtcgtccctcgcgttcgacacgatcttcgccgagggccagcgccgc
tacgtcgagtcgctgtccgcgtacgcgcgccagttcctcggccaggtcgaccggccggac
gtcgacttcatcgagggcctgagccccgcggtctccatcgaccagaagtcgacgaaccgc
aacccgcgctcgacggtgggcaccatcaccgagatcttcgactacatgcgcctgctctgg
gcgcgcatcggcgtcgcgcactgccccgtctgcggggagcgcatctcgcgccagaccgtg
cagcagatcgccgaccagctcatggagctcgagaccggcaccaggtaccagatcgtcagc
cccatcgtctcgcagaagaagggcgagttcgtcgacctgttcgcggagctcgcctccggc
ggctactcgcgggccatcgtcgacggggagctcatccagctcagctcgccgcccaagctc
aagaagcagtacaagcacgacatctcggtcgtcgtcgaccgcctggtcgcgagcgacgac
atcctcgggcgcctgacggactcgctggagaccgcgctccgcctcacggacggcatcgtg
atgatcgacttcgtcgacgtcgacggccccggcggactgcagacgtactccgagaagctc
tcatgcccgaacaaccaccccatccagctcaccgagatcgagccgcgcacgttctcgttc
aacgcccccttcggcgcctgccccgagtgctccggtctcggcacgcgcatgtcggtggac
caggagctcctcatcggcgacgagtcgctgagcatcgccgacggcgtgatcctgccgtgg
accacgcagggcaaggggctcttccagtactacgagaagctgctcgcgggcctcgcgcgc
gacctcaagttctccctcacgacgccctggcggaagctctccgaggaggtccgcgaggcc
gtcctgcggggcaatgacttcgaggtccaggtcaagtggaagaaccgctacgggcgcgaa
atgacctactcgtccggcttcgagggcgtcatgccctacatcgagcgccagttcgcccag
gcggagaccgacaaccagcgcgcgcgctggggcgagtacctccgcgagatcccgtgcccc
gtctgcgacggcaagcgcctgaagcctgaggtgctcgcggtgctcgtgcacggtgcgaac
atcgccgacgtcgccgagatgagcctctcggacgcgcaggagttcatggcgcagctggag
ctgaccgatcgcgaggcgcacatcgccgcgcaggtgctgcgggagatccgcgtgcgcctc
gagttcctcatcgaggtcggcctcaactacctcaacctcgcgcgggccgcggcatctctg
tccggcggggaggcgcagcgcatccggctggccacgcagatcggctcgggcctcacgggc
gtgctgtacgtgctcgacgagccgagcatcggcctgcaccagcgcgacaaccgccgcctc
atcgagacgctcgtgaagctccgcgacctcggcaacaccctcatcgtcgtcgagcacgac
gaggacaccatccgcacggccgactggatcgtcgacatcggccccggcgccggcgtcaac
ggcggcaaggtcgtgcactccggctcctacgagggcctcatcgagaaccgggagtcgctc
acgggcgactacctcgcgggccgccgcgccatcgcgacgccggcgaagcgccgcaagatc
gacaagaagcggcagatccaggtcgtcggcgcgcgcgccaacaacctgcagaacgtcacc
gcgaccttcccgctcggcacgctcacggccgtcaccggcgtcagcggctcgggcaagtcc
tcgctcgtgaacgacatcctctaccgcgtgctcgccaacgagctcaacggcgcccgcaag
gtgccgggcaagcactcccgcgtcacgggcctcgagaacctcgacaaggtcgtgcacgtc
gaccagaaccccatcggccgcaccccgcgctcgaacccggccacctacacgggcgtgttc
gaccggatccgcaacctcttcgccgagaccaccgaggccaaggcccgcggctacctcccg
ggccgcttcagcttcaacgttaagggcgggcgctgcgaggcgtgctcgggcgacggcacc
atcaagatcgagatgaacttcctgccggacgtgtacgtggcgtgcgaggtctgcggggga
gcgcgctacaaccgcgacaccctgagcgtccactacaagggcaagagcatcgccgaggtc
ctcgacatgtccatcagcgaggcggccgagttcttcgagccgatccaggccatccaccgc
ttcatgaagacgctggtggacgtcggcctcggttacgtgcggctcggccagagcgccacg
acgctctccggcggcgaggcgcagcgcgtcaagctgtccaccgagctgcagcgccggtcg
aacggccgcagcatctacgtgctcgacgagccgaccacgggcctccacttcgaggacgtg
cgcaagctcctgctcgtgctcaacgggctggtcgacaagggcaacacggtcatcgtcatc
gagcacaacctcgacgtcatcaagtccgccgactggctcatcgacatggggccggagggc
ggcgcgggcggcggcaccgtgctcgccaccggcacccccgagcacctggccaccgtgccg
gagagctacacgggcggcttcctcaaggaggtcctcgacgccgaggccgaggccgcggcg
atcgagtcgcagcgtgcgcgcgaggagcgcgcggccggctga
DBGET
integrated database retrieval system
