Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
cms Clavibacter sepedonicus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cms00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMS1999 (polA)
03410 Base excision repair
CMS1999 (polA)
03420 Nucleotide excision repair
CMS1999 (polA)
03440 Homologous recombination
CMS1999 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cms03032]
CMS1999 (polA)
03400 DNA repair and recombination proteins [BR:cms03400]
CMS1999 (polA)
Enzymes [BR:cms01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMS1999 (polA)
DNA replication proteins [BR:cms03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CMS1999 (polA)
DNA repair and recombination proteins [BR:cms03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CMS1999 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMS1999 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2116621..2119305)
|
AA seq |
894 aa
MPNTEKPTLLVIDGHSLAFRAFYALPAESFQNREGQHTNAVHGFIAMLINLLQKEKPTHV
GVAFDISRFSFRTREYPGYKGTRGETPVEFTGQVPLLERALKTMNIPTLTKEDHEADDIL
ATLATQGREQGFRVLVVSGDRDAIQLVNDDVTLLYPSTQGVSQLTRYDAEKVFEKYGVQP
GMYPDIAALVGETSDNLIGVDKVGPKTAVKWLNQYGSLDAVLEHRDEITGKVGDNLRAQY
ENVIRNRRLNRLLTDVELPLGPADLERKPIDEPALREVFAVLEFKQLLDRVLKLEGSGAS
ASSEGTPVGAVEQEPSTAPAAPRPQQLLDEELAKWIETQSAASPHGLGLTVETQDGKPVG
FGLASATEAVTLPWQEGRADYAPFERWLASDAPKVMSDAKVQVKAMRRAGLRVQGLAFDV
LVAGWLLRPGFTDKSLAALVSRYLMEDLPEPDANQLVPETEALTAPVEAWYTLRVEHALR
EVLDERTLGVMVDIEMPTLLVLVEMELRGVATDRAGLAELSAQLQERITGLAERAFAEIG
KEINLGSPKQLQEVLFDQLGMPKTRANKTGFSTDAGALADLQASNPHPFLDLLLEHRDAS
KLRQIIQTLERGIGDDERIHTTYVQTGTTTGRISSNDPNLQNIPVRTEEGRRIRSAIRVG
EGYETLLTADYSQIEMRIMAHLSGDAGLIEAFEVGEDLHRFVGSSIFGVEPADVSPAMRT
KVKAMSYGLAYGLSAFGLSKQLRIPSSEAKQLMTDYFARFGAVRDYLRQVVEEARAAGYT
ETIFGRRRPFPDLNSPNRVLRDNAERAALNAPIQGSAADIMKIAMIRIEADMRERDMASR
MLLQVHDELILEVAPGEWDALQAIVTDRMAHAADLRVPLEVQVGRGDSWAAAAH |
NT seq |
2685 nt +upstreamnt +downstreamnt
gtgccgaacacggaaaagcctaccctcctcgtcatcgacggccattccctggcgttccgg
gccttctacgccctgccggcggagagcttccagaaccgcgaggggcagcacaccaacgcc
gtgcacggcttcatcgccatgctcatcaacctcctgcagaaggagaagcccacgcacgtc
ggcgtcgcgttcgacatctcgcgcttttcgttccgcacgcgcgagtacccggggtacaag
ggcacgcgcggcgagacgcccgtggagttcacgggccaggtgccgctgctcgagcgcgcg
ctgaagaccatgaacatccccaccctcaccaaggaggaccacgaggccgacgacatcctc
gcgaccctcgccacgcagggtcgggagcagggcttccgggtgctcgtggtctcgggcgac
cgggacgcgatccagctggtcaacgacgacgtgacgctgctgtacccgtccacgcagggc
gtctcgcagctcacgcgctacgacgcggagaaggtgttcgagaagtacggcgtgcagccg
gggatgtacccggacatcgcggcgctcgtgggggagacgagcgacaacctcatcggcgtc
gacaaggtcggcccgaagaccgcggtcaagtggctcaaccagtacggatccctcgacgcg
gtgctcgagcaccgcgacgagatcacgggcaaggtcggcgacaacctccgcgcccagtac
gagaacgtcatccgcaaccgccgcctcaaccggctgctcaccgacgtcgagctgccgctc
ggcccggccgacctcgagcgcaagcccatcgacgagcccgccctccgcgaggtgttcgcg
gtgctggagttcaagcagctgctggatcgcgtgctgaagctcgagggatccggcgcgtcc
gcgtcgagcgagggcacgcccgtcggcgccgtcgagcaggagccgtcgaccgcgccggcc
gccccgaggccgcagcagctcctcgacgaggagctcgcgaagtggatcgagacgcagagc
gccgcgtcgccgcacggcctggggctcacggtcgagacgcaggacgggaagcccgtcggc
ttcgggctcgccagcgcgaccgaggccgtgaccctgccctggcaggagggccgcgcggac
tacgcgcccttcgagcggtggctcgcgagcgacgcgcccaaggtcatgtccgacgccaag
gtccaggtgaaggcgatgcgccgggccggcctccgggtccagggcctcgccttcgacgtg
ctcgtcgcgggctggctgctgcgtccgggcttcaccgacaagtccctggcggccctcgtg
agccggtacctcatggaggacctgcccgagccggacgccaaccagctcgtgcccgagacc
gaggcgctcacggcgcccgtcgaggcctggtacacgctccgggtcgagcacgcgctgcgc
gaggtgctcgacgagcgcacgctcggcgtcatggtcgacatcgagatgccgaccctgctc
gtgctcgtggagatggagctgcgcggggtcgcgacggatcgcgccggactcgccgagctg
tcggcgcagctgcaggagcgcatcaccggcctcgccgagcgcgcgttcgccgagatcggc
aaggagatcaacctcgggtcgccgaagcagctgcaggaggtcctcttcgaccagctcggc
atgccgaagacgcgcgccaacaagaccggcttctccaccgacgcgggcgcgctggccgac
ctgcaggcgtccaacccgcaccccttcctcgacctgctcctcgagcaccgcgacgcgagc
aagctgcggcagatcatccagacgctcgagcgcggcatcggcgacgacgagcggatccac
accacctacgtgcagaccggcaccaccaccggccgcatctcgtcgaacgacccgaacctg
cagaacatccccgtccgcacggaggagggccgccgcatccgcagcgccatccgcgtcggc
gagggctacgagacgctgctcacggccgactactcgcagatcgagatgcggatcatggcg
cacctctcgggcgacgccgggctcatcgaggccttcgaggtcggcgaggacctgcaccgc
ttcgtcggatcgagcatcttcggggtcgagcccgcggacgtgagcccggccatgcgcacg
aaggtcaaggccatgagctacgggctcgcctacgggctcagcgccttcgggctgtcgaag
cagctgcgcatcccgtcgtcggaggcgaagcagctcatgaccgactacttcgcgcgcttc
ggcgcggtgcgcgactacctccgccaggtggtggaggaggccagggccgccggctacacg
gagacgatcttcggacgccgtcgcccgttccccgacctcaacagcccgaaccgcgtcctc
cgcgacaacgccgagcgggctgccctcaacgcgcccatccagggctcggcggccgacatc
atgaagatcgcgatgatccgcatcgaggccgacatgcgcgagcgcgacatggcgtcgcgc
atgctgctgcaggtgcacgacgagctcatcctcgaggtcgccccgggggagtgggacgcg
ctccaggccatcgtcaccgaccgcatggcccacgcggccgacctccgcgtgccgctcgag
gtgcaggtgggccgcggcgactcgtgggccgccgcagcgcactga |