Clavibacter sepedonicus: CMS2006
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Entry
CMS2006 CDS
T00678
Name
(GenBank) putative glutamate synthase alpha subunit
KO
K00265
glutamate synthase (NADPH) large chain [EC:
1.4.1.13
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00250
Alanine, aspartate and glutamate metabolism
cms00910
Nitrogen metabolism
cms01100
Metabolic pathways
cms01110
Biosynthesis of secondary metabolites
cms01120
Microbial metabolism in diverse environments
cms01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
CMS2006
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CMS2006
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cms01002
]
CMS2006
Enzymes [BR:
cms01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
CMS2006
Peptidases and inhibitors [BR:
cms01002
]
Cysteine peptidases
Family C44
CMS2006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
Motif
Other DBs
NCBI-ProteinID:
CAQ02103
UniProt:
B0RET8
LinkDB
All DBs
Position
complement(2125832..2130403)
Genome browser
AA seq
1523 aa
AA seq
DB search
MAFSSTSPPGGSFPATQGLYDPAFEKDACGLAMVATLRGTPGHDIIVNALDALRNLEHRG
AIGSDAGTGDGAGIMTQIPDEFLRGVVGFDLPPMGEYAVGMAFLPTDDAEREELEAGIER
IAGDERLHVLGWREVPVDPSHLGNLARKAMPAFRQLFLTSDSAQPSDRPSGLALDRLAFR
LRKRAERELGAYFISLSSRTLVYKGMVTTLQLEPFYPDLSDERFASKLAIVHSRYSTNTF
PSWPLAQPLRMMAHNGEINTVAGNRNWMRARQSQLESELLGDLAPLMPIVTPGASDSASF
DEVLELLSLSGRSLPHAMMMMVPEAWEKQTDIDPVRRDFYEYHSMVMEPWDGPAALTFTD
GTLVGATLDRNGLRPGRYLVTHDGLVVLGSEIGVLEIDPARIMRKGRLRPGKMFLVDTEA
GRIIEDDEIKSQLAASAPWGEWLENRIHLADLPEREHVVHTPASVVRRQRTFGYTEEEVR
MLVMPMAKVGAEPLGAMGSDTPIAVLSQRPRLLFDYFTQQFAQVTNPPLDSIREEVVTSL
RLGLGPQRNLLDAGPEHTKQVVLDFPVIDNDELAKVIHIDHRPGSRTTTIVSGLYRVDDG
PLAMQKRIDAMCDEVDRAIAHGAQFVVLSDRDSNRDLAPIPSLLMIAAVHHHLIRKQTRM
KVGIVVEAGDVREVHHIALLIGYGASAINPYLAMESCEDLVRSGMLTGVTPEKATRNLIK
GLGKGVLKIMSKMGISTVSSYAGAQCFEAVGLSQGLVDQYFSGTTTRLGGVGIDVIAAEN
AARHRSAYPQDGAVLSHERLQTGGEYQWRRDGSPHLFNPDTIFRLQHATRTRRYDIFREY
TSMVDAQSKDLMTLRGMFRLKTGTRPPVPLDEVEPISDIVKRFSTGAMSYGSISEEAHET
LAIAMNRLGAKSNTGEGGENVERLLDPERRSSIKQVASGRFGVTSMYLTHADDIQIKLAQ
GAKPGEGGQLPPGKVYPWVARTRHATAGVGLISPPPHHDIYSIEDLKQLIFDLKRANPSA
RIHTKLVSQSGIGAVAAGVAKALSDVILVSGHDGGTGASPVNSLKHAGTPWELGLAETQQ
TLRLNGMRDRVVVQVDGQMKSGRDVIVGALLGAEEFGFATAPLVVSGCIMMRVCHLDTCP
VGVATQNPELRKRFPGKADHVVNFFEFIAQEVREHLAALGYRALDEIVGRNDLLGVEDAV
DHWKASGLDLTPILAGPTFADDEPMKHSRSQDHELDDHFDNELIRLSRDVLDHGGRVEID
LPVRNTARAVGTMLGHLVTKGHGEDGLPTGSIDVTLRGSAGQSFGAFMPSGITLRLVGDS
NDYLGKGLSGGDIVVRPDERAGFPAEENVIAGNVIGYGATQGTMFIRGMVGERFLVRNSG
ATAVVEAVGDHALEYMTGGLALVLGGTGRNIGAGMSGGTAYVIDLDRDRINTDALASGEL
ELHPLGSADAEIVLDLLRRHLAETGSTVAERLLAEPETSMERFTKILPRDYAAVLATRQT
AVDEGLDPDGDVAWNRILEVTGG
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctcctccacctcccctcccggcggctcgttccccgcgacgcagggcctctat
gacccggcgttcgagaaggacgcgtgcggcctggccatggtggccaccctgcggggcacc
ccgggccacgacatcatcgtcaacgcgctcgacgcgctgcggaacctcgagcaccgcggg
gccatcggctccgacgcgggcaccggcgacggcgccggcatcatgacccagatcccggac
gaattcctccgcggcgtggtcggcttcgacctgccgcccatgggggagtacgcggtcggc
atggcgttcctgccgacggacgacgccgagcgcgaggagctggaggccggcatcgagcgc
atcgcgggcgacgagcggctgcacgtgctcgggtggcgcgaggtgcccgtcgacccgtcg
cacctcggcaacctggcgcggaaggccatgcccgccttccgtcagctcttcctcacctcc
gactccgcgcagccctccgaccgcccgtcggggctcgcgctcgaccgactcgccttccgc
ctgcgcaagcgcgcggagcgggagctcggcgcctacttcatctcgctgtcctcgcggacc
ctcgtctacaagggcatggtcacgacgctccagctcgagccgttctaccccgacctctcc
gacgagcgcttcgcgtcgaagctcgccatcgtgcactcgcggtactccaccaacacgttc
ccgtcgtggcccctcgcgcagccgctgcgcatgatggcgcacaacggcgagatcaacacg
gtcgcgggcaaccgcaactggatgcgcgcccgccagtcgcagctcgagtcggagcttctc
ggcgacctcgcgccgctgatgcccatcgtcacgccgggcgcgagcgactccgcgtccttc
gacgaggtgctcgagctcctcagcctcagcggccgcagcctgccgcacgcgatgatgatg
atggtccccgaggcgtgggagaagcagaccgacatcgaccccgtccgccgcgacttctac
gagtaccactccatggtcatggagccgtgggacggcccggccgcgctcaccttcaccgac
ggcacgctcgtcggcgcgaccctcgaccgcaacggcctgcgcccgggccgctacctcgtc
acgcacgacggcctcgtggtgctcggcagcgagatcggcgtgctcgagatcgacccggcc
cgcatcatgcggaagggccggctccgccccggcaagatgttcctcgtcgacaccgaggcc
ggccgcatcatcgaggacgacgagatcaagtcccagctcgccgccagcgccccgtggggc
gagtggctcgagaaccgcatccacctcgccgacctccccgagcgcgagcacgtcgtgcac
acgcccgcgtccgtcgtccggcgccagcgcaccttcggctacacggaggaggaggtgcgg
atgctggtcatgcccatggcgaaggtgggcgccgagcccctcggcgccatgggatcggac
acgcctatcgccgtgctctcgcagcgcccgcgcctgctgttcgactacttcacgcagcag
ttcgcgcaggtcaccaacccgccgctcgactccatccgcgaggaggtcgtcaccagcctc
cgcctcggactcgggccgcagcgcaacctcctcgacgccggccccgagcacacgaagcag
gtcgtgctcgacttcccggtcatcgacaacgacgagctggctaaggtcatccacatcgac
caccgcccgggcagccgcaccaccaccatcgtgagcggcctctaccgcgtggacgacggc
ccgctcgccatgcagaagcgcattgacgcgatgtgcgacgaggtcgaccgcgccatcgcg
cacggcgcacagttcgtcgtcctctcggaccgcgactcgaaccgcgacctcgcgccgatc
ccgtcgctcctcatgatcgcggccgtgcaccaccacctcatccgcaaacagacccgcatg
aaggtcggcatcgtggtcgaggccggcgacgtgcgcgaggtgcaccacatcgcgctgctc
atcggctacggcgcctcggcgatcaacccgtacctggcgatggagtcgtgcgaggacctc
gtccgcagcggcatgctcacgggcgtgacgccggagaaggcgacgcggaacctgatcaag
gggctcggcaagggcgtgctcaagatcatgtccaagatgggcatctcgacggtgtcctcg
tacgccggcgcccagtgcttcgaggcggtcggcctctcgcaggggctcgtggaccagtac
ttctcgggcaccacgacgcgcctcggcggcgtcggcatcgacgtcatcgcggccgagaac
gcggcgcgccaccgcagcgcctacccgcaggacggcgctgtgctgtcgcacgagcgcctg
cagacgggcggcgagtaccagtggcgtcgcgacgggtccccgcacctgttcaacccggac
acgatcttccggctgcagcacgccacgcgcacgcggcggtacgacatcttccgcgagtac
acgtcgatggtcgacgcgcagtcgaaggacctcatgacgctccgcggcatgttccgcctg
aagaccggcacccgcccgcccgtcccgctcgacgaggtggagcccatctccgacatcgtg
aagcgcttctccacgggcgcgatgagctacgggtccatctccgaggaggcgcacgagacg
ctcgccatcgcgatgaaccgcctgggagcgaagtcgaacaccggtgagggcggcgagaac
gtcgagcgcctgctcgaccccgagcgacgcagctccatcaagcaggtcgcgtccggccgc
ttcggcgtcacgagcatgtacctcacgcacgccgacgacatccagatcaagctcgcgcag
ggcgccaagcccggcgagggcggccagctgccgcccggcaaggtgtacccgtgggtcgcg
cgcacgcggcacgcgaccgccggcgtcggcctcatctcgccgccgccgcaccacgacatc
tactcgatcgaggacctcaagcagctgatcttcgacctcaagcgcgcgaacccctccgcc
cggatccacaccaagctcgtcagccagtcgggcatcggcgcggtcgcagccggcgtcgcc
aaggcgctgagcgacgtgatcctcgtctcgggtcacgacggcggcacgggcgcgagcccg
gtcaactcgctcaagcacgcgggcaccccgtgggagctggggctcgccgagacgcagcag
accctccgcctcaacggcatgcgcgaccgcgtggtcgtgcaggtcgacgggcagatgaag
tccggccgcgacgtcatcgtcggcgcgctgctcggcgccgaggagttcgggttcgccacg
gccccgctcgtcgtctcgggctgcatcatgatgcgcgtctgccacctcgacacctgcccc
gtcggcgtcgccacgcagaacccggagctgcgcaagcgcttcccgggcaaggccgaccac
gtcgtcaacttcttcgagttcatcgcgcaggaggtgcgggagcacctggccgccctcggc
taccgcgcgctcgacgagatcgtgggccgcaacgacctgctcggagtcgaggacgcggtc
gaccactggaaggcgtccggcctcgacctgacgccgatcctggccggcccgaccttcgcg
gacgacgagccgatgaagcacagccggtcgcaggaccacgagctcgacgaccacttcgac
aacgagctcatccgcttgagccgcgacgtgctcgaccacggcggccgggtcgagatcgac
ctgcccgtgcgcaacacggcgcgcgcggtcggcacgatgctcggccacctcgtcaccaag
gggcacggggaggacgggctgccgacgggatccatcgacgtcacgctgcgcggctccgcc
ggccagtcgttcggcgcgttcatgccgtcgggcatcacgctgcgcctcgtcggcgacagc
aacgactacctcggcaagggcctctcgggcggcgacatcgtcgtgcggcccgacgagagg
gccggcttccccgcggaggagaacgtcatcgcgggcaacgtcatcggctacggcgcgacg
cagggcacgatgttcatccgcggcatggtgggggagcggttcctcgtccgcaactcgggc
gcgaccgcggtcgtcgaggccgtgggagaccacgcgctcgagtacatgaccggcgggctc
gccctcgtcctcggcggcaccggccggaatatcggcgcgggcatgtccggcggcacggcg
tacgtgatcgacctcgaccgcgaccgcatcaacactgacgcgctcgcgtcgggcgagctc
gagctgcacccgctcgggagcgccgacgccgagatcgtgctcgacctcctccgccggcac
ctcgccgagaccggatccaccgtggccgagcgcctgctcgccgagccggagacctccatg
gaacgcttcaccaagatcctgccgcgggactacgcggccgtcctcgccacccgccagacc
gcggtggacgagggcctcgaccccgacggcgacgtcgcctggaaccgcatcctggaggtg
accggtggctga
DBGET
integrated database retrieval system
