Clavibacter sepedonicus: CMS2023
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Entry
CMS2023 CDS
T00678
Symbol
priA
Name
(GenBank) putative primosomal protein n' (replication factor y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CMS2023 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cms03400
]
CMS2023 (priA)
Enzymes [BR:
cms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMS2023 (priA)
DNA repair and recombination proteins [BR:
cms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CMS2023 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
CAQ02119
UniProt:
B0REV3
LinkDB
All DBs
Position
complement(2143071..2145107)
Genome browser
AA seq
678 aa
AA seq
DB search
MMVDSPLPQLDRLFDYAVPEPLRATCVPGVRVRVPLRSAGRVADGYVIEVGDGRGYDGAL
SEVEQVVSPLPVLRPEIWTLAREVADRQAGTASDVIRLAVPPRQVRVEKAHLAAMAATPA
EADADADAVAVAVAAPVAAAAAPLDPAPPAALPPAALPPIDGYAPDGLAAAVDGSGRVAV
DAIPEVVELPGGVWAGRWAVTLAQAAARVLASGRSSVLVVPDYRDQDQLEAALAAHAPAG
SVTRTDARQSGPDRYRSFLAGLGDEPRIVVGNRSAVYAPAPRLGLVAMWDEGDPLHAEPL
SPYAHARDVALLRSRQQGTALVLLAHSRSTEVERLVAIGYLSSVAPEKNRTPRVIPTTSQ
TGDEGFARQARIPSGAWRAAKDAVEHGPVLIQVARPGYAPLVACRACRQAARCTVCTGPL
GMSTATSTPTCGWCGHLAGDWRCVNCGSDELRLVTIGAGRTAEELGRAFPCVQVVLADGE
RHVQEVDAESRLVVATRGAEPVAAGGYRAILLLDGERMLARESLRVGEDVLRQWSNAAAL
AAPRAPVMLVGVGGQVARALATWQQPRYAREELLERRALRFPPAVRAASVEGLPDAVGQA
VERLDGIEGVDVLGPVPTEQGRVRAIVRLDYASGPDAARELRAAVVRNASSRRKPVAGRT
GFRPTVPLRVRFDDTGLF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgatggtggactccccgctgccgcagctcgaccgcctcttcgactacgcggtccccgag
ccgctccgcgcgacgtgcgtgcccggcgtgcgcgtgcgcgtgccgctgcggtccgcgggt
cgcgtggccgacggctacgtcatcgaggtcggcgacggacggggctacgacggcgccctc
agcgaggtggagcaggtcgtgtcgccgctgcccgtgctccggccggagatctggacgctc
gcacgggaggtcgccgaccggcaggcagggaccgcgtccgacgtgatccgcctggccgtc
ccgccgcgccaggtgcgcgtcgagaaggcgcacctggcggcgatggcggcgaccccggcg
gaggccgacgccgacgccgacgccgtcgccgtcgccgtcgccgcgccggtcgccgccgcc
gccgctccgctcgacccggccccgcccgccgcgctgccgcccgccgcgctcccacccatc
gacgggtacgcccccgacggcctcgccgcggcggtcgacggatccggtcgcgtggccgtc
gacgccatcccggaggtcgtcgagctgcccggcggcgtgtgggctggccgctgggccgtg
acgctggcgcaggccgccgcgcgcgtcctcgcatccggccgcagcagcgtcctcgtcgtg
cccgactaccgcgaccaggaccagctcgaggcggccctggccgcgcacgcccccgccgga
tccgtgacgcgcaccgacgcgcgccagtccggccccgaccgctaccgctccttcctcgcc
ggcctcggcgacgagccgcgcatcgtggtcggcaaccgctccgccgtctacgcgcccgcg
ccgcgactcggcctcgtcgcgatgtgggacgagggcgatccgctgcacgccgagccgctc
agtccctacgcccacgcgcgcgacgtcgcgctcctgcgcagccgtcagcagggcacggcg
ctcgtgctgctcgcgcactcgcggagcaccgaggtcgagcggctcgtcgcgatcggctac
ctgtcgagcgtcgcgccggagaaaaaccggaccccgcgggtgatcccgaccacctcgcag
acgggcgacgaggggttcgcccggcaggcgcggatcccgtcgggcgcctggcgcgcggcc
aaggacgcggtcgagcacgggccggtgctcatccaggtcgcccgacccggctacgcgccg
ctcgtcgcctgccgggcctgccgccaggccgcgcgctgcaccgtctgcacgggcccgctc
ggcatgtccaccgccacgagcacgcccacctgcggctggtgcgggcacctcgccggcgac
tggcgctgcgtcaactgcggatccgacgagctgcgcctcgtcaccatcggcgcgggccgc
acggcggaggagctgggacgtgcgttcccctgcgtgcaggtcgtgctggccgacggcgag
cgccacgtgcaggaggtcgacgcggagtcgcggctcgtcgtcgccacgcgcggggccgag
cccgtcgccgcgggcggctaccgcgcgatcctgctgctcgacggggagcggatgctcgcc
cgcgagagcctgcgggtgggggaggacgtgctccgccagtggtcgaacgccgccgccctc
gccgcgccgcgcgcgcccgtgatgctcgtcggcgtcggcggccaggtcgcccgcgccctc
gccacctggcagcagccgcggtacgcgcgcgaggagctcctcgagcgccgcgccctgcgc
ttcccgcccgccgtgcgcgccgcgagcgtcgagggcctgccggacgcggtcggccaggcg
gtcgagcggctcgacggcatcgagggggtcgacgtcctcggcccggtgcccaccgagcag
ggccgcgtgcgcgccatcgtccgcctcgactacgcgagcggtcccgacgcggcgcgcgag
ctgcgcgcggccgtcgtgcggaacgcctcgagccgccggaagcccgtcgcgggccgcacc
gggttccggcccacggtcccgctccgtgtacggttcgacgacacggggctgttctga
DBGET
integrated database retrieval system
