Clavibacter sepedonicus: CMS2178
Help
Entry
CMS2178 CDS
T00678
Symbol
peh
Name
(GenBank) endo-polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00040
Pentose and glucuronate interconversions
cms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CMS2178 (peh)
Enzymes [BR:
cms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
CMS2178 (peh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
CAQ02272
UniProt:
B0RFQ2
LinkDB
All DBs
Position
2304518..2306041
Genome browser
AA seq
507 aa
AA seq
DB search
MRRHVTLLLPALLLAACLAGHPQPAQANEVARPGAVLPPTAPWAATPRVDRASEAGDPLT
ASLVEAVGDRRHPSAPRPPSTTCATIPAQLSMPGRTASAAEEASPPDTARIQRGLDACAG
TGGAVRLSTSGAATDFLSGPLVVRPGEVLLVDPAATLFASRNAAAYQVAGHGRCGTIGGD
GLGCAPFLAVGSGSGVESTRAADGTQGRIDGRGDATLLGSATTWWALSAQAKAGGNQNVP
RLIKAQRSNDVTVADVDLIDSPGQHISFNDGVGLTVWGVVVFTPANARNTDGIDPAGAQD
VTIADSYIMDGDDGIAIKASDAPSAHITIRGNTLTGTHGISLGRQTTAGISDVLIDGNTI
SGKDRYGNQSVAAGGIRIKSSAAAGGLVRDITFRDTCIDLVKAPVVFDSRYESGSGTHIP
SFTGIVVDGLRATNSVKGAASVLEGFDAAHPLGLLLRRVDVDDPDVRAAYADITTQGAHF
GGVPLTASGAGVRVTAQADAGAAPACG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgacacgtcaccctgctcctccccgcgctcctcctcgccgcctgtctcgcgggc
caccctcagcccgcacaggcgaacgaggtcgcccgccccggcgcggtgctcccgcccacc
gccccatgggccgcgacgcctcgcgtggatcgcgcatccgaggccggtgaccccctcacc
gcctcgctggtcgaggcggtgggtgaccgacgtcatccgagcgcaccgcgcccgccctcg
acgacgtgcgcgacgatccccgcccaactgtccatgccgggacggaccgcgagcgcggcc
gaggaggcctccccgccggacaccgcgcgcatccagcgcggcctcgacgcctgcgcgggc
acgggcggagcggtgcgcctcagcacctccggtgccgcgaccgacttcctcagcggtccg
ctcgtcgtccgaccgggcgaggtgctgctcgtcgaccccgctgccaccctcttcgcgtcg
cggaacgcggctgcctaccaggtggccggtcacggccgctgcggcaccatcgggggagac
ggcctggggtgcgcgcccttcctcgccgtcggatccggctccggggtggagtccacccgg
gccgccgacggtacccaggggcggatcgacgggcgcggcgacgcgaccctgctcggatcc
gcgaccacctggtgggccctttccgcgcaggcgaaggccgggggcaaccagaacgtgccg
cggctcatcaaggcacagcgctcgaacgacgtgaccgtggccgacgtcgacctcatcgac
tcgcccgggcagcacatctccttcaatgacggcgtcggcctcaccgtgtggggcgtcgtg
gtgttcaccccggcgaacgcccgcaacaccgatggcatcgacccggccggcgcccaggac
gtcaccatcgccgactcctacatcatggacggcgacgacggcatcgccatcaaggcctcc
gacgccccgtcggcgcacatcacgatccgtggcaacacgctcaccggcacgcacggcatc
tccctcggtcggcagaccaccgcagggatcagcgacgtgctcatcgacggcaacaccatc
agcggcaaggacaggtacggcaaccagagcgtcgccgccggggggatccgcatcaagagc
tcggccgcggcgggcggcctggtccgcgacatcacgttccgcgacacctgcatcgacctg
gtcaaggcacccgtggtgttcgactcgcggtacgagtccggcagcgggacgcacatcccc
agcttcaccgggatcgtcgtcgacggcctacgtgccacgaactcggtgaagggggcggcg
agcgtgctcgagggcttcgatgcggcgcatcccctcggcctgctgctacggcgcgtggac
gtcgacgatccggacgtccgcgccgcgtacgccgacatcacgacccagggcgcccacttc
ggcggcgtgccgctcacggcatcgggggccggggtgcgggtcacggcgcaggccgacgcc
ggcgcggcacccgcctgcggctga
DBGET
integrated database retrieval system
