Clavibacter sepedonicus: CMS2200
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Entry
CMS2200 CDS
T00678
Name
(GenBank) putative large exported protein
KO
K20276
large repetitive protein
Organism
cms
Clavibacter sepedonicus
Pathway
cms02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMS2200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
SH3_12
Motif
Other DBs
NCBI-ProteinID:
CAQ02294
UniProt:
B0RFS4
LinkDB
All DBs
Position
complement(2329116..2335139)
Genome browser
AA seq
2007 aa
AA seq
DB search
MIREWIRRHRQAATTVTGGAVVLALLTGFALVSDGYQAQRVDLDDGSVWVVNSAQQAIGR
ANTSVLELDSVVDSRSEDIDVLQAGSTVLLADRGSSRLDVVDDATSAVVDTAPLPAGAEV
MLAGSRAAILVPATGQLWLVPVAGLSAFDAASAPALLLGTDAVASMGDDGTLLVYSAATG
ALSRIQAATEDTVSETVDVGPVGAPVDEAADALADPAAALAGETVQAGDSGRPAGQRLAL
ASVGDHWALYDADARALLVDGRTVDLAGSVAADARVALQRASSDGSGVLVAHSGGLVDVP
VAGGEPVVVSGDARGEPARPVRVAGCEYAGWTDGSGWQRCLAPAVLPGAGEVDQDARRTA
AGATGDLGSMPQQASLRFVVDGARVVLNDTRGGTAWAVQRDAGRIDNWSDLIDRDRSDTV
VEQNTADTPPETDRVQQPPVAVDDDLGARPGRTTALPVLLNDHDPNGDVLVIDSVTPVDA
EVGAVDVVDDGQGLQLALAARASGTVRFSYVVSDGRGGTATADVRVAVRAPDENAPPVQV
RPATGSVAEGDRLQTDVLGGWYDPDGDPVYLTRASVAAPDAVSWKPEGRVVYTDAGAGGD
TRTVALQVSDGREEGSGELVVTVRREGDVPLVAEGFVVQASLGREITVEPLTHARGGSGA
IRLAAVPARAGVQITPDLEAGTFRLQGGQAGTHLLEYTVTDGRTTATGVVRVEVRGAVES
DGRPVTVPHTVFVRALQAQDVDVLQADFDPAGGVLVITDATSPDDAVGVRAEVVGQRLVR
ISLTRPLDGPVDVAYRVSNGVAEATGVITVIEVPEPAVRQPPVATDDRVAVRVGDAVDIP
VLANDEQPDGDALRLDPVLVDPLPEGAGLLFASEDRLRYLAPDRTGDYTAVYRAVAPDGQ
WATATLTVSVREADVATNAAPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRLLGQDSG
PEKGQVIEVGPDWIDYQAGDYSTGTDAFAYAVVDGLGARATGTIRVGISTRVEGARNPVA
TADTVTVRPGRVLRVQVLANDTDPDGGALELVSVQPQAEGLVAGLDGDTVRVVAPEQAGR
YGFVYGVRNARGGSDEAFLTVIVDPAAPPTRPIARDTVLQLSDVLDRSSVDVDVMRSVFS
AEGDASSLVLAVGAGYEDVARVTADGRIRVEVGDERRIVPFTVAQPDDPSISATAFVWVP
GFEDTLPQLRVGVPRPTVASGERLVVELDQQVVAAGGRAVRIADPNSPQATHADGPVELV
DEDTVAYRSEPGYFGPAAISFTVTDGSGSGADGGRTAALVLPITVTPTENQPPVFTGAVI
DLEPGQSKDVDLGRLTTYPYQDDRGQLAFALEGAVAAGFRASVDGGTLRISADEAAATGQ
AASFPVSVRDATQTGRAGRVDLRVVPSTRPLAEPATDEGEVTRGSSTSIDVLANDQAGNP
FPGTPLTVASIRGADGASLPAGVTVTPSADRATLAVNASADAEPGDVRVQYEVRDATGDA
GRAAFGTVVIHVQDRPGPVSALRASGFADRSLTVAFEPGAFNGSAITGYQVRVLRGGTAT
AAVVCPSTTCTVPTPGNGPAASVQVEVVAINGVGTSDPVSISGLWSDVLPAAPAGLAIEP
LVDGLRVSWQPSAVPSSSSPVTQYVVGVGGITRQVAADATSVEVRDPSLVAEVPVAVAVA
ARNSAQVQDASAWLAATATGTPRGAPTATGVPGAVADPADETRVTVSWPAFQGQGVDGIR
YLVAAYAPGSAPGCSVPTEGVSPWSAEHGPAVDVGGATSHVFTGLATDQPVAFAVLAANS
QGCTVVEAGQLIPRTAPSTPVVTVDLPSPDRGSDGVFRAVLADARYRPGDPSASALLLYR
VDGQGDGVPIGVGQALTLPRTGVGATIQVRVVEDSGDGRQRSSGWSDPVSAGTAVDARAG
DVRSATDDAGVTAFSWTSMPPAAGRGARVGDGSGYARSEWRCGGQGAWTDASSGAAGSCA
VPAGGERILEVRVTANSGTLYTYAHRG
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgagtggatccgccgccaccgccaggccgcgacgaccgtcaccggcggggcc
gtcgtgctcgccctcctcacgggcttcgcgctcgtgtcggacggctaccaggcgcagcgg
gtcgacctcgacgacggatccgtgtgggtcgtcaactcggcgcagcaggccatcggccgc
gccaacacgtccgtgctcgagctcgacagcgtcgtcgactcccgcagcgaggacatcgac
gtgctgcaggccggatccaccgtgctgctcgccgaccgcggcagttcgcgcctcgacgtg
gtcgacgacgcgacgagcgcggtggtcgacacggcgccgctgcccgcgggcgccgaggtc
atgctcgcgggatcccgcgccgcgatcctcgtgccggcgaccggccagctgtggctcgtg
ccggtggcgggcctctccgcgttcgacgccgcgagcgcgcccgcgctcctcctcgggacc
gacgccgtcgcgtcgatgggcgacgacgggacgctcctcgtgtactcggccgcgacgggc
gcgctgtcgcgtatccaggccgccaccgaggacacggtgagcgagaccgtggacgtcggg
cccgtcggcgcgcccgtggacgaggcggccgacgccctcgccgaccccgcggccgcgctc
gcgggcgagaccgtccaggcgggggattccggccgacccgccgggcagcggctcgcgctc
gcctccgtcggcgaccactgggcgctctacgacgccgacgcgcgcgccctcctcgtcgac
gggcgcacggtcgacctcgccggatccgtggccgcggacgcgcgcgtcgccctccagcgc
gcctcctcggacgggagcggcgtgctcgtcgcgcactcgggcggactcgtcgacgtgccc
gtcgcgggcggcgagccggtcgtcgtctccggcgacgcgcgcggcgagcccgcgcgcccc
gtccgcgtggccggctgcgagtacgcgggctggaccgacggatccggctggcagcggtgc
ctggcccccgccgtgctcccgggtgcgggcgaggtcgaccaggacgcgcggcgcacggcg
gcgggcgcgaccggcgacctcggatccatgccgcagcaggcgtccctgcgcttcgtcgtc
gacggcgcgcgcgtcgtgctcaacgacacgcgcggcggcaccgcctgggccgtgcagcgc
gacgcgggccgcatcgacaactggtcggacctcatcgaccgcgaccgctccgacaccgtc
gtcgagcagaacaccgcggacaccccgcccgagaccgaccgcgtgcagcagccgcccgtc
gcggtcgacgacgacctcggggcgcggcccggccgcaccaccgcgctgcccgtgctgctc
aacgaccacgacccgaacggcgacgtgctcgtgatcgactccgtcacacccgtggacgcc
gaggtcggcgcggtcgacgtcgtggacgacggccagggcctccagctcgcgctcgccgcg
cgcgcgtccggcacggtgcggttctcgtacgtcgtgagcgacgggcgcggaggcacggcg
acggcggacgtgcgggtcgccgtgcgcgcgcccgacgagaacgcgccgcccgtgcaggtg
cggccggcgaccggatccgtggccgagggcgaccggctgcagaccgacgtgctgggcggg
tggtacgaccccgacggggatcccgtgtacctcacgcgcgcgagcgtcgccgcgcccgac
gccgtcagctggaagcccgaggggcgcgtcgtctacacggacgcgggggccggcggcgac
acgcgcacggtcgcgctgcaggtgtccgacgggcgcgaggagggatccggggagctggtc
gtcaccgtgcgccgcgaaggggacgtgccgctcgtggccgagggcttcgtcgtgcaggcg
tcgctcgggcgcgagatcacggtggagccgctgacgcacgcgcgcggcgggagcggcgcg
atccggctggcggccgtccccgcgcgggccggcgtgcagatcacgcccgacctcgaggcc
ggcaccttccgcctgcagggcggccaggccggcacgcacctgctcgagtacacggtgacc
gacgggcggaccacggccacgggcgtcgtgcgcgtcgaggtgcgcggggccgtcgagtcc
gacggacggcccgtgaccgtgccgcacaccgtgttcgtgcgcgcgctccaggcgcaggac
gtggacgtgctccaggccgacttcgaccccgcgggcggcgtgctcgtgatcaccgacgcg
acatcgcccgacgacgccgtgggcgtgcgcgcggaggtcgtcgggcagcggctcgtgcgg
atcagcctgacgcggccgctcgacggacccgtggacgtcgcgtaccgcgtgagcaacggc
gtggccgaggcgaccggcgtgatcaccgtgatcgaggtgcccgagccggccgtccgccag
ccgcccgtcgcgaccgacgaccgcgtcgccgtgcgcgtgggcgacgccgtggacatcccg
gtgctcgccaacgacgagcagcccgacggcgacgcgctgcgcctcgaccccgtgctcgtg
gatccgctgcccgagggcgccggcctcctcttcgcgagcgaggaccgcctccgctacctc
gcgcccgaccgcacgggcgactacacggccgtctaccgcgcggtcgcgcccgacgggcag
tgggcgaccgcgaccctcaccgtgtccgtgcgcgaggccgacgtcgcgaccaacgcggcg
cccgtgccgcgcccgctcacggcgcgcgtgctcgcgggggagaccgtgcggatcccggtg
ccgctcaccggcatcgaccccgacggcgactccgtgcggctgctcgggcaggacagcggg
ccggagaaggggcaggtcatcgaggtcgggccggactggatcgactaccaggcgggcgac
tactccaccggcaccgacgcgttcgcgtacgccgtggtcgacgggctcggcgcccgggcg
accggcacgatccgcgtgggcatcagcacgcgcgtcgagggcgccaggaaccccgtcgcg
accgccgacaccgtgaccgtgcggcccggccgcgtgctgcgcgtgcaggtgctcgcgaac
gacacggatcccgacggcggcgcgctcgagctcgtgtcggtgcagccgcaggccgagggg
ctcgtcgcgggcctcgacggcgacaccgtccgcgtcgtcgcgcccgagcaggccgggcgc
tacggcttcgtctacggcgtgcgcaacgcgcgcggcgggagcgacgaggcgttcctcacc
gtgatcgtggatcccgccgcgccgcccacccggcccatcgcgcgcgacacggtgctgcag
ctctccgacgtgctcgaccggtcgagcgtcgacgtggacgtgatgcgcagcgtcttctcc
gcggagggcgacgcgtcgtcgctcgtgctcgcggtcggcgcgggctacgaggacgtggcg
cgcgtgacggccgacgggcggatccgcgtcgaggtcggcgacgagcgccggatcgtcccg
ttcacggtggcgcagccggacgacccctcgatctcggcgacggccttcgtctgggtgccc
ggcttcgaggacacgctgccgcagctgcgcgtgggcgtgccgcgcccgaccgtggcgagc
ggcgagcggctcgtggtcgagctcgaccagcaggtggtcgccgcgggcggccgggccgtg
cgcatcgccgacccgaactcgccccaggcgacgcacgccgacggacccgtggagctcgtg
gacgaggacaccgtcgcgtaccggagcgagccggggtacttcgggccggcggcgatctcg
ttcacggtgaccgacggatccggatccggcgccgacggcgggcgcacggccgcgctcgtg
ctccccatcacggtcacgcccaccgagaaccagccgcccgtgttcacgggcgcggtcatc
gacctggagcccgggcagtccaaggacgtcgacctcggccgcctcaccacctacccgtac
caggacgaccgcgggcagctcgccttcgcgctggagggggccgtcgccgccggcttccgc
gcgtcggtcgacggcggcacgctccgcatctcggccgacgaggccgcggcgacgggacag
gccgcgtcgttcccggtgagcgtccgcgacgccacgcagaccgggcgggcgggccgcgtg
gacctccgcgtggtgccgtcgacgcgcccgctcgccgagcccgcgaccgacgagggcgag
gtgacccgcggatcctccacgtccatcgacgtgctcgccaacgaccaggcgggcaacccg
ttcccgggcacgccgctcacggtcgcctccatccgcggcgccgacggcgcgagcctccct
gccggagtgacggtgacgccgtcggccgaccgcgccaccctcgccgtcaacgcgtccgcc
gacgccgagcccggcgacgtgcgcgtgcagtacgaggtgcgcgacgcgacgggcgacgcg
gggcgggccgcgttcggcaccgtcgtgatccacgtgcaggaccgcccggggcccgtctcg
gccctccgcgcgtccggcttcgcggaccggtcgctcacggtcgcgttcgagccgggcgcc
ttcaacggatccgccatcacgggctaccaggtgcgcgtcctccgcggcggcaccgcgacc
gcggccgtcgtctgcccgtcgacgacgtgcaccgtgccgacgcccggcaacggccccgcg
gcctcggtgcaggtggaggtggtggcgatcaacggggtcggcacctcggacccggtgtcg
atctcgggcctgtggtcggacgtgctcccggccgcccccgccggcctcgcgatcgagccg
ctcgtcgacgggctccgcgtctcgtggcagccgtcggcggtgccgtcgtcgtcgagcccc
gtcacgcagtacgtcgtgggggtgggcggcatcacccggcaggtcgcggccgacgccacg
agcgtcgaggtgcgggatccgtcgctcgtcgccgaggtgcccgtcgccgtcgcggtggcc
gcgcgcaacagcgcccaggtgcaggacgcatccgcgtggctcgccgccaccgcgaccggc
acgccgcgcggcgctccgaccgcgacgggcgtgcccggcgccgtggccgacccggccgac
gagacgcgcgtcactgtgtcctggcccgcgttccagggccagggcgtcgacgggatccgc
tacctcgtcgccgcgtacgcccccggctccgcgcccggctgctccgtgcccaccgagggc
gtctcgccgtggtcggccgagcacggacccgcggtcgacgtcggcggcgcgaccagccac
gtgttcacgggcctcgccacggatcagccggtcgccttcgcggtgctcgccgccaacagc
cagggctgcacggtcgtcgaggccggccagctgatcccgcgcacggcgccgtcgacgccc
gtcgtcacggtcgacctgccgagcccggaccgcgggagcgacggcgtcttccgcgcggtc
ctcgccgacgcccgctaccggccgggcgacccgtccgcgtcggcgctgctgctgtaccgg
gtcgacgggcagggcgacggcgtccccatcggcgtgggccaggcgctcacgctgccgcgc
acgggcgtcggcgcgacgatccaggtgcgcgtcgtggaggactcgggcgacgggcgccag
cgctcgagcggctggtcggatccggtctccgccggcaccgccgtcgacgcgcgcgcgggc
gacgtgcgctcggcgaccgacgacgccggcgtcacggccttctcgtggacctcgatgccg
ccggccgcgggtcgcggcgcgcgcgtcggcgacggcagcgggtacgcgcgcagcgagtgg
cgctgcggcggccagggcgcgtggaccgacgcgtcctcgggcgcggccgggtcgtgcgcg
gtccccgcgggcggcgagcggatcctggaggtgcgggtcaccgcgaactcgggcaccctg
tacacgtacgcccaccgcggatga
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