Clavibacter sepedonicus: CMS2595
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Entry
CMS2595 CDS
T00678
Symbol
sucD
Name
(GenBank) succinyl CoA synthetase alpha chain
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00020
Citrate cycle (TCA cycle)
cms00640
Propanoate metabolism
cms00660
C5-Branched dibasic acid metabolism
cms00720
Other carbon fixation pathways
cms01100
Metabolic pathways
cms01110
Biosynthesis of secondary metabolites
cms01120
Microbial metabolism in diverse environments
cms01200
Carbon metabolism
Module
cms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CMS2595 (sucD)
00640 Propanoate metabolism
CMS2595 (sucD)
00660 C5-Branched dibasic acid metabolism
CMS2595 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
CMS2595 (sucD)
Enzymes [BR:
cms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CMS2595 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Fervidolysin_SD2
Motif
Other DBs
NCBI-ProteinID:
CAQ02675
UniProt:
B0RIA4
LinkDB
All DBs
Position
complement(2748625..2749512)
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AA seq
295 aa
AA seq
DB search
MSILLDENSKIIVQGLTGSEGTKHAGRMLASGSKVVGGVNPRKAGSTVTIEGVELPIFGS
VAEAMTETGADVSVIFVPPAFAKSAVVEAIDAAIPLAVVITEGIPVKDSAEFWSHAKSTG
GKTRIVGPNCPGIISPGKSNAGIIPATITEAGPIGLVSKSGTLTYQMMFELRDLGISTAI
GIGGDPIIGTTHIDALEAFEADPETRAIVMIGEIGGDAEERAAEYIKAHVTKPVVAYVAG
FTAPEGKTMGHAGAIVSGGSGTAQGKKEALEASGVKVGKTPTETANLLREVFAAL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcttctcgacgagaatagcaagatcatcgtccagggcctcacggggtccgag
ggcaccaagcacgcgggccgcatgctcgcgtccggcagcaaggtcgtcggcggcgtcaac
ccgcgcaaggccggcagcacggtcacgatcgagggcgtcgagctcccgatcttcggctcc
gtcgccgaggcgatgacggagacgggcgccgacgtgtcggtcatcttcgtcccgccggcc
ttcgccaagagcgccgtggtggaggcgatcgacgccgccatcccgctcgcggtcgtcatc
accgagggcatccccgtcaaggactcggccgagttctggtcgcacgccaagagcacgggc
gggaagacccgcatcgtcggcccgaactgccccggcatcatcagccccggcaagtcgaac
gccggcatcatccccgccaccatcaccgaggccggccccatcggcctcgtgtcgaagtcg
ggcacgctcacgtaccagatgatgttcgagctgcgcgacctcggcatctcgaccgccatc
ggcatcggcggcgacccgatcatcggcaccacgcacatcgacgccctcgaggcgttcgag
gccgacccggagacgcgcgccatcgtgatgatcggcgagatcggcggcgacgccgaggag
cgcgcggccgagtacatcaaggcgcacgtcaccaagccggtcgtcgcgtacgtcgcgggc
ttcaccgctcccgagggcaagacgatgggccacgccggcgcgatcgtctccggggggagc
ggcacggcgcagggcaagaaggaggccctcgaggcctcgggcgtcaaggtcggcaagacg
ccgaccgagacggccaacctcctccgcgaggtcttcgccgccctctag
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