Clavibacter sepedonicus: CMS2756
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Entry
CMS2756 CDS
T00678
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMS2756 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cms03019
]
CMS2756 (groL2)
03110 Chaperones and folding catalysts [BR:
cms03110
]
CMS2756 (groL2)
03029 Mitochondrial biogenesis [BR:
cms03029
]
CMS2756 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cms04147
]
CMS2756 (groL2)
Enzymes [BR:
cms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CMS2756 (groL2)
Messenger RNA biogenesis [BR:
cms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CMS2756 (groL2)
Chaperones and folding catalysts [BR:
cms03110
]
Heat shock proteins
HSP60 / Chaperonin
CMS2756 (groL2)
Mitochondrial biogenesis [BR:
cms03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CMS2756 (groL2)
Exosome [BR:
cms04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CMS2756 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
CMS2756 (groL2)
Exosomal proteins of breast cancer cells
CMS2756 (groL2)
Exosomal proteins of colorectal cancer cells
CMS2756 (groL2)
Exosomal proteins of bladder cancer cells
CMS2756 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
bHLH_NPAS4
Motif
Other DBs
NCBI-ProteinID:
CAQ02828
UniProt:
B0RAY1
LinkDB
All DBs
Position
2899623..2901242
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAVTEELKAAAKEIETKEEIAATASISAGDSTIGAIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSQYFVTDPERQEAVFEDAYILIVNSKISNIKDLLPIVDKVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIA
EEVGLKLENVTLDLLGTARKVVITKDETTIVEGGGDATEIAARVQQIRNEIGNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFEKLQLEGDEATGANIVRVAVDAPLKQIALNAGLEPGVVAERVRNLPSGHGLNAAT
GEYVDMLAAGINDPVKVTRSALLNAASIAGLFLTTEAVVADKPEKNPAPAGDPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatcatcgcttttgacgaagaagcccgccgcggcctcgagcgcggcctgaac
atcctggccgacgcggtccgcgtgaccctcggcccgcgtggccgcaacgtcgtcctggag
aagaagtggggcgcccccaccatcacgaacgacggcgtgtcgattgccaaagagatcgag
ctcgacgacccgttcgagaagatcggcgcggagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgaccaccgcgaccgtcctcgcgcaggccctggtccgc
gagggcctccgcaacgtcgccgcgggcgccgaccccatcagcctcaagcgcggcatcgag
aaggccgtcgcggccgtcacggaggagctcaaggccgccgcgaaggagatcgagacgaag
gaggagatcgccgccaccgcgtccatctccgccggcgactccaccatcggcgccatcatc
gccgaggcgatcgacaaggtcggcaaggagggcgtggtcaccgtcgaggagtccaacacc
ttcggcaccgagctcgagctcaccgagggcatgcgcttcgacaagggctacctgtcgcag
tacttcgtcaccgacccggagcgccaggaggccgtgttcgaggacgcgtacatcctgatc
gtcaactcgaagatctcgaacattaaggatctgctgccgatcgtcgacaaggtcatccag
tcgggcaagcagctcctcatcatcgccgaggacgtcgacggcgaggccctggccacgctc
gtcgtcaacaagatccgcggcatcttcaagtcggtcgccgtcaaggcccccggcttcggc
gaccgtcgcaaggcgcagctgcaggacatcgccatcctcaccggtggccaggtcatcgcc
gaggaggtcggcctcaagctcgagaacgtcaccctcgacctgctcggcacggcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtcgagggtggcggcgacgccaccgagatc
gcggcccgcgtgcagcagatccgcaacgagatcggcaacacggacagcgactacgaccgc
gagaagctccaggagcgcctcgcgaagctggccggcggcgtggccgtcatcaaggccggc
gccgcgaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtcgccctcatccaggcc
ggcaagctcgcgttcgagaagctgcagctcgagggcgacgaggcgacgggcgcgaacatc
gtccgcgtcgcggtcgacgctccgctcaagcagatcgccctcaacgcgggcctcgagccg
ggcgtcgtggccgagcgcgtccgcaacctcccctcgggtcacggcctcaacgccgccacg
ggtgagtacgtcgacatgctcgccgcggggatcaacgacccggtgaaggtcacgcgctcg
gctctgctgaacgccgcctccatcgcgggtctgttcctcacgaccgaggccgtcgtcgcc
gacaagcccgagaagaacccggccccggccggcgaccccacgggtggcatggacttctag
DBGET
integrated database retrieval system
