Clavibacter sepedonicus: CMS2805
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Entry
CMS2805 CDS
T00678
Name
(GenBank) putative lipoprotein
Organism
cms
Clavibacter sepedonicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7507
Big_9
Cadherin_4
DUF11
HYDIN_VesB_CFA65-like_Ig
Bact_lectin
Motif
Other DBs
NCBI-ProteinID:
CAQ02876
UniProt:
B0RBI0
LinkDB
All DBs
Position
complement(2952756..2956151)
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AA seq
1131 aa
AA seq
DB search
MARARAHRASSRPPAPRSRGTRRLAALVIAALAAVTLVASPAAPAVAAPLNVTESFTGTS
VADPAWRTLGAACLTRATVAPHAGQSGVGVCASRTGAPASAATPGSLQLTDNTVNSSGGI
VYDTPLPVSGGLDVRFDQFQYGQGTNGNEGIAFFLADGSRPVAQIGGGAGSLGYAQTTAR
AGIDGAYLGVGLDSGGSFSVAADGRGTGCAQVAPGSRPNAVALRGAGQGGTGYCYLSGSG
LGTSRQLHAALPSSSNAAPPGTAGRTIRVQVSNAALPVVTVSYGASAGLPDAQLAVVHQY
TMTTSPPASVKLGFTATTGTLTDTHLIQNVRIASVAPTSGVLQLTKTLDPAFAQASYAEG
QDVRYRFSITAPQLLSVINDVQVADPLVPSVQCSANAFLLAGTITCTGAHRVTAQEAMQG
SLVNTAVASGQPVLSSRLSSNADSVSVPITRPSPLLALTKVGTLTDTNVNGVADAGERIA
YSFIARNSGNVTLQGVAVTDPRVTGVAPATATLAPGASQTFTSTAYTVTAADVAAGTPIS
NTATVTGRTLAGQEAPAALSTVTTPVRAAGAITLTKDASLVGGSVPGATVTYTLRATNTG
GAAMTGVTIADPLAGLSAMAYTWPGTAGTLAVGASVTATATYSVKQSDVDAGQIANTATA
SGTLSGGTVVQGSASRTLALARTATLDFTKTASPSNVIAAGDIVTYGFLVRNTGTTTLTG
VGVADPRPGVSALTYTWPQTAGTLAPGHVVTATARYSATAADVQAGSIVNTATATATTSA
GATVTRTASATVTAVPDPVADAATTAQGTAVVIDVLANDGRAATGAAFSRAQLSATPKLI
GGASGPVPTAPASGSVTCVDSGTERGRCTYSPILGFTGVDVFDYALSSSVDTWNVRVTVT
VTPVNRTPVARPDRLVATTGGATVTIDPRANDTDPAGDALAITSAPQPAALRGTLTCAAA
LCTYVPPTDGWTGSVVVTYSITDRPAAPATGITATSTLTVHVDPAPLTSRGFTDRADTSL
GVSTGTWAGTSSITTATASCVAGRPVTGLAWAAAPGATDWVVERRLDGTTPGAWTTVARL
AGTATSFSDDRLGESRSYQWRVRPDLQRWLGVASAPSIAVAQPAAFSAAGC
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagcgcgtgcgcacagggcgtcatcgcgacctcctgcaccccgctcccgcggg
acccggcggctcgcggccctcgtcatcgccgccctcgccgccgtcaccctggtcgcgtcg
cctgccgcgccagccgtcgcggctccgctcaacgtgacggagtcgttcaccggcacgagc
gtcgcggatcccgcctggcggacgctcggcgccgcctgcctcacccgcgccaccgtcgcg
ccgcacgccggccagtcgggcgtcggcgtgtgcgccagccgcaccggcgctcccgcgagc
gcggccacgccgggatccctccagctcaccgacaacaccgtgaacagcagcggcggcatc
gtctacgacaccccgctgcccgtcagcggcggcctggatgtgcggttcgaccagttccag
tacggccagggcaccaacggcaacgagggcatcgcgttcttcctcgccgacggatcccgc
cccgtcgcccagatcggcggcggggccgggtcgctcggctacgcgcagacgacggcacgc
gcgggcatcgacggcgcgtacctcggcgtgggcctcgactcgggcggcagcttctcggtc
gcggcggacggccgcgggaccggctgcgcgcaggtcgcgccgggctcgcgccccaacgcc
gtcgccctgcgcggcgcgggtcagggcggcacgggctactgctacctctccgggagcggc
ctgggcaccagccgccagctgcacgccgccctgccgagctcgtccaacgcggcgccgccg
ggcacggccgggcgcaccatccgcgtccaggtctcgaacgccgccctgccggtggtgacc
gtctcctacggggccagcgccggcctgcccgacgcgcagctcgcggtcgtgcaccagtac
acgatgaccacgtcgcccccggcctccgtgaagctcgggttcacggcgaccaccggcacg
ctgaccgacacgcacctcatccagaacgtgcgcatcgcgtccgtggcgccgacgagcggc
gtcctccagctgacgaagaccctcgacccggcgttcgcgcaggcctcctacgcggagggc
caggacgtgcgctaccggttctcgatcaccgcgcctcagctcctcagcgtcatcaacgac
gtgcaggtcgcggatcccctcgtgccctcggtgcagtgcagcgcgaacgcgttcctgctg
gccgggacgatcacctgcaccggcgcccaccgcgtcaccgcccaggaggcgatgcaggga
tcgctcgtcaacacggcggtggcgtccgggcagcccgtgctgagctcgaggctctcgagc
aacgcggactcggtctccgtgccgatcacgcggccctcgccgctcctcgccctcacgaag
gtgggcacgctcaccgacacgaacgtcaacggcgtggccgacgccggggagcgcatcgcg
tactcgttcatcgcgcggaacagcggcaacgtgacgctgcagggcgtcgcggtgacggat
ccgcgcgtgacgggcgtcgccccggccacggcgacgctcgcgccgggcgcgtcgcagacc
ttcacctccaccgcgtacacggtgacggccgccgatgtcgccgcgggcacgccgatctcc
aacacggccaccgtcaccggccggaccctcgccgggcaggaggcgcctgccgccctgtcc
acggtcacgacgcccgtgcgggccgccggcgcgatcacgctgacgaaggacgcgtcgctc
gtgggcggctcggtcccgggcgccacggtgacctacacgctccgggccaccaacacgggc
ggcgcggcgatgaccggcgtgacgatcgcggatccgctcgccgggctgtccgccatggcc
tacacgtggccgggcacggcgggcacgctcgccgtgggcgcatccgtcacggccaccgcg
acctactccgtgaagcagtccgacgtggacgcgggccagatcgcgaacacggcgaccgcg
agcggcacgctctcgggcggcacggtcgtgcagggcagcgccagccgcaccctggccctc
gcgcgcaccgccaccctcgacttcacgaagaccgcctccccgtcgaacgtcatcgcggcg
ggcgacatcgtgacgtacggcttcctcgtgcggaacacgggcacgaccacgctcacgggc
gtcggcgtcgccgatccgcgccccggcgtctccgcgctcacctacacctggccgcagacc
gcgggcacgctcgcgcccggtcatgtggtgacggccaccgcccggtactcggccaccgcg
gccgacgtgcaggcgggatccatcgtcaacaccgcgaccgcgaccgcgacgacctcagcg
ggggcgaccgtcacccggacggcctccgcgaccgtcaccgcggtgccggatcccgtcgcc
gacgccgcgaccaccgcccagggcaccgccgtggtgatcgacgtgctcgccaacgacggc
cgggccgccacgggcgccgccttcagccgcgcgcagctgtccgcgaccccgaagctcatc
ggcggcgcgtccgggccggtgcccacggcccccgcctccggcagcgtcacgtgcgtcgac
tcgggcacggagcgcgggcgctgcacgtacagcccgatcctcgggttcaccggggtggac
gtcttcgactacgcgctctcgagcagcgtcgacacctggaacgtccgggtcaccgtcacg
gtcacgcccgtcaaccgcacgccggtcgcccggccggaccgcctcgtcgccaccacgggt
ggcgcgacggtgaccatcgacccgcgcgccaacgacacggatcccgccggggacgcgctc
gcgatcacgagcgccccgcagccggccgccctccgcggcaccctcacctgcgcggccgcg
ctctgcacctacgtgccccccacggacgggtggacgggatccgtggtcgtgacgtactcg
atcaccgaccgcccggcggcgcccgccacgggcatcacggccacgtccacgctcacggtg
cacgtggatcccgcgcccctcacctcccgcgggttcacggaccgggccgacacgagcctc
ggcgtgagcacggggacctgggcgggcacgtcgtccatcacgacggcgaccgccagctgc
gtcgccggacggcccgtcaccgggctggcgtgggcggcggcaccgggagcgacggactgg
gtcgtcgagcggcgcctcgacggcacgacgcccggcgcctggaccaccgtcgcccgcctc
gccggcaccgcgacgtcgttctcggacgaccggctcggcgagtcccgctcctaccagtgg
cgcgtccggcccgacctgcagcgctggctcggcgtcgcgagcgcgccctccatcgccgtc
gcccagccggcggccttctccgcggcgggctgctga
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