Clavibacter sepedonicus: CMS2868
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Entry
CMS2868 CDS
T00678
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00020
Citrate cycle (TCA cycle)
cms00190
Oxidative phosphorylation
cms00650
Butanoate metabolism
cms00720
Other carbon fixation pathways
cms01100
Metabolic pathways
cms01110
Biosynthesis of secondary metabolites
cms01120
Microbial metabolism in diverse environments
cms01200
Carbon metabolism
Module
cms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cms_M00149
Succinate dehydrogenase, prokaryotes
cms_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CMS2868 (sdhA)
00650 Butanoate metabolism
CMS2868 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CMS2868 (sdhA)
00720 Other carbon fixation pathways
CMS2868 (sdhA)
Enzymes [BR:
cms01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CMS2868 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
HI0933_like
Pyr_redox_2
DAO
Motif
Other DBs
NCBI-ProteinID:
CAQ02939
UniProt:
B0RBP3
LinkDB
All DBs
Position
3022086..3023909
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AA seq
607 aa
AA seq
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MTTDTATPGSEPSASTIVDGVHYHQFDIVIVGAGGAGMRAAIEAGPQANTAVISKLYPTR
SHTGAAQGGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDLENMG
LPFNRTPDGKIDQRRFGGHTADHGKSPVRRSCYAADRTGHMILQTLYQNCVKFGINFFNE
FYVLDLVMAEVDGKEQPAGVVALELSTGEIHVFQSKAVIFATGGFGKIYKTTSNAHTLTG
DGVGIIWRKGLPLEDMEFFQFHPTGLAGLGILLSEAARGEGAILRNSEGERFMERYAPTI
KDLAPRDIVARCMATEIREGRGAGPNEDYVYLDITHLEPAVIDAKLPDITEFARTYLGVE
PYTEPVPVLPTAHYAMGGIPTNIKAEVLSDNSTVVPGLYAAGECACVSVHGSNRLGTNSL
LDINVFGKRAGNYAAEYVKGVDFTPLPADAADFVKGLVEGARNSNGTERISTLRRELQES
MDRNAQVFRTEDTLIEVTKVIADLRDRYTNIQVQDKGQRFNTDLLEAIELGFLLDLAEVV
VYSAMYRKESRGGHFREDFPKRDDENYMVHTMAYLTGDAHSTDAGDHIKLSTKPVVITNY
QPMERKY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactgacaccgccacccccggttccgagccctccgcgagcaccatcgtggacggc
gtccactaccaccagttcgacatcgtcatcgtgggtgcgggcggcgccggcatgcgcgcg
gcgatcgaggcgggaccgcaggcgaacacggccgtcatctcgaagctctacccgacgcgc
tcccacacgggcgcggcgcagggcggcatggccgccgcgctcgcgaacgtcgaggaggac
agctgggagtggcacaccttcgacaccgtcaagggcggcgactacctcgtcgaccaggac
gcggcggagatcctcgcgaaggaggccatcgacgcggtcatcgacctcgagaacatgggc
ctccccttcaaccgcacgcccgacggcaagatcgaccagcgccgctttggcggccacacg
gccgaccacggcaagagccccgtccgccggtcctgctacgcggccgaccgcacgggccac
atgatcctgcagacgctgtaccagaactgcgtcaagttcggcatcaacttcttcaacgag
ttctacgtcctcgacctcgtcatggccgaggtcgacggcaaggagcagcccgcgggcgtc
gtggccctcgagctgtcgaccggcgagatccacgtcttccagtcgaaggccgtgatcttc
gcgaccggcggcttcggcaagatctacaagacgacctcgaacgcgcacaccctcacgggc
gacggcgtcgggatcatctggcgcaagggcctgccgctcgaggacatggagttcttccag
ttccatccgaccggtctggccggcctcggcatcctcctgtccgaggcggcccgcggcgag
ggcgcgatcctccgcaacagcgagggcgagcggttcatggagcgctacgcgcccaccatc
aaggacctcgctccccgcgacatcgtcgcccggtgcatggccacggagatccgcgagggt
cgcggcgcgggcccgaacgaggactacgtctacctcgacatcacgcacctggagcccgcg
gtcatcgacgcgaagctcccggacatcacggagttcgcgcgcacgtacctcggcgtcgag
ccgtacacggagcccgtgcccgtgctgccgaccgcgcactacgcgatgggcggcatcccc
acgaacatcaaggccgaggtcctctccgacaactccaccgtggtgcccggcctctacgcg
gccggcgagtgcgcgtgcgtgtccgtccacggatccaatcgcctcggcaccaactcgctc
ctcgacatcaacgtgttcggcaagcgcgcgggcaactacgcggccgagtacgtcaagggc
gtcgacttcacgccgctccccgcggacgccgcggacttcgtgaagggcctcgtcgagggc
gcgcgcaactccaacggcaccgagcggatctcgaccctgcgtcgcgagctgcaggagtcg
atggaccgcaacgcccaggtgttccgcaccgaggacacgctgatcgaggtcaccaaggtg
atcgccgacctgcgcgatcggtacacgaacatccaggtgcaggacaagggccagcggttc
aacacggacctgctcgaggccatcgagctcggcttcctgctcgacctcgcggaggtcgtc
gtgtactcggcgatgtaccgcaaggagagccgcggcggccacttccgcgaggacttcccg
aagcgggacgacgagaactacatggtccacaccatggcgtacctcaccggcgacgcgcac
agcaccgacgccggcgaccacatcaagctcagcaccaagcccgtggtcatcacgaactac
cagccgatggagcggaagtactga
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