Clavibacter sepedonicus: pCSL0069
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Entry
pCSL0069 CDS
T00678
Name
(GenBank) putative large membrane protein
Organism
cms
Clavibacter sepedonicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
CAQ03312
UniProt:
B0RJC2
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All DBs
Position
pCSL1:complement(48214..51264)
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AA seq
1016 aa
AA seq
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MRKILTGLGSLIALVAIIGGVPAVLLMAAGNPIPTPDQLHSIVTLTPDYGNVILLTRILP
LVGWVAWALFAIPMLFEIAASIAGRTTTKRSWAFKGQQQLAATMIAAVLVMFASSGGVQA
ASAAPAHSDMARTTASAPQAPATVTAPATATAAAPAAASPAPVAAAPATVDVQHTVVHGD
TLWDLAEHYYGDGARDVDIYKASAGITQPGGAHLSNPDRILPGWQLVIPGVAAPQPAPTP
EPAAAPAPDAGSTSGAAASTSSSSTADVGAPSDLAGGAGGGGATVQDAAPSTQTETEAPA
AAPSAAPAPAAAAPAPPVDAAASAGATASDDVDLSIPLTTAGGIGALLAAALLAALGRRR
QMQRRKRQPGTRIAMPQKPASELELELRMVEDPLGITDIDNALRGLQIWAEDTGSALPEL
FALRLEKSEIALYLTGPAELPAPFVKAHPDGTAWVITPGTALTPSRDSVSPYPALITIGV
DERDGVLMLDLEQIGSLNITGDDATARGLLNAMAVELAENPWSDQIQVTLVGMPHGLARD
LNRFRVQHVDDVDALVRNIRHDLQEREHALASYGIGGVHAGRVHATEAESWAPHIVILAE
VPSEEKQTELAELVDRIPRLGVATVSNGATVARGSTIELSSRTSAQLVSAGGAMPPLPFA
PQLLDGEELRLIQQLFDTTQHESVPAPARVDEIPATATVLADASTEEAHVDVVADAPTEV
PADAPDAVDVVLHDQDEAPTQAVAEAPDEELPAAAAAADTTAAEDEVVEESPSWPAPYVR
LLGPVDALHLADEDAMPGRGVELMAYLLLNGRVEGRQLQMAFWPDTKDASNNQRGLAKKV
RLALGHSPTGELLLPENVNHQGYTLHPAIRSDWDDFRDLIGPDLSRTSNEDLVRAIKLVR
GQPFSGCNTVRWWQWISIPLEEMIAAVMDAADELGRRALDERDSDQARFAARVAQSVDPL
NEAGWRTELRAAMQTGDTDEFRRIVDAMYARVSGTDPDYELDDETQDLVTAGDRQQ
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagatcctcaccggactcggctcgttgatcgcgctcgtcgcgatcatcggggga
gtgcccgccgttctgctgatggcggccggcaacccgatccccacgcccgaccagctgcac
agcatcgtcacgctgaccccggactacggcaacgtcatcctgctcacccggatcctgccc
ctcgtcggctgggtcgcgtgggccctgttcgcgatcccgatgctgttcgagatcgcggca
tccatcgccggccgcaccaccaccaagcgctcctgggcgttcaagggccagcagcagctc
gcggccacgatgatcgccgccgtcctcgttatgttcgccagctccggcggtgtccaggct
gcttcagcagcccccgcccacagcgacatggcccgcacgaccgcgagcgccccgcaggcg
cccgccaccgtcacggcgcccgccaccgcgacggccgcagcgcccgcagcggcgtctccg
gcaccggtcgccgcggcgccggccaccgtcgacgtccagcacacggtcgtgcacggcgac
acgctctgggacctcgccgagcactactacggcgacggcgcccgcgacgtcgacatctac
aaggcctccgccggcatcacccagcccggcggcgcccacctcagcaaccccgaccgcatc
ctcccgggctggcagctcgtcatcccgggcgtcgccgcgccccagcccgccccgacgcct
gagccggctgccgcgcccgcaccggacgccggcagcaccagcggcgcggccgcgtcgacg
tcgtcctcgtccaccgccgacgtcggagccccctccgacctcgccggaggcgctgggggc
ggcggcgccaccgtccaggacgcggcgccgtccacccagaccgagaccgaggcgcctgcc
gcggcgccgtccgccgcgccggcaccagccgccgccgcgcccgcaccgcccgtcgatgct
gcggcgagcgccggcgccaccgcttcggacgacgtcgacctgagcattccgctcacgaca
gcgggcggcatcggcgcgttgctggccgcggcgttgctggccgcgttgggtcgtcggcgc
cagatgcagcgtcggaagcgtcagccggggactcggatcgcgatgccgcagaagccggcg
agcgaactcgagctagagctgcggatggtggaggacccgctcgggatcaccgacatcgac
aacgcgctgcgtggtctgcagatctgggctgaggacaccggcagcgcgttgccggagctg
ttcgccctgcgcctggagaagtcggagatcgcgctgtacctcaccggtcccgcggagctc
ccggccccgttcgtgaaggcgcacccggacggaaccgcgtgggtcatcaccccggggacg
gcgctgacgcccagcagggattccgtgtcgccgtacccggccctgatcacgatcggcgtc
gacgagcgcgacggcgtcctcatgctcgatctcgagcagatcggatccctgaacatcacc
ggcgacgacgccaccgcgcgcggcctgttgaacgccatggcggtggagctcgccgagaac
ccgtggtccgaccagatccaggtcaccctcgtggggatgccgcacgggctcgcccgcgac
ctcaaccggttccgggtgcagcacgtcgacgacgtcgacgcgcttgtgcggaacatccgc
cacgacctgcaggagcgcgagcacgcgctcgcgtcctacggcatcggtggtgtccacgca
ggccgcgtgcacgcgaccgaggcggagtcgtgggcgccgcacatcgtgatcctcgcggag
gtgccctcggaggagaagcagaccgagctcgcggagctcgtcgaccggatcccgcgcctg
ggcgtcgcgaccgtgtccaacggggcgaccgtcgcccgcggatccaccatcgagctcagc
tcccggacgagcgcgcagctggtctcggccggcggcgcaatgccgccgctcccgttcgcc
ccgcagctcctagacggcgaggagctgcgcctgatccagcagctgttcgacaccacccag
cacgagtccgtccccgctcccgctcgcgtcgacgagatcccggccacggccaccgtgctc
gcggacgcgtcgacggaggaggcgcacgtcgacgtcgtggccgacgctcccaccgaggtg
cccgcggacgccccggacgccgtggacgtcgtgctccatgaccaggacgaggcaccgacg
caggcggtggccgaggctccggacgaggagctccccgcagcggccgcggccgcggacacc
accgcggccgaggacgaggtcgtagaggagtcgccgagctggccggcgccgtacgtgcgc
ctgctgggcccggtcgacgcgctgcacctagccgacgaagacgcgatgcccggccgcggc
gtggagctcatggcgtacctgctgctgaacggccgagtcgagggccgtcagctgcagatg
gccttctggccggacaccaaggacgcctccaacaaccagcgcgggctcgcgaagaaggtg
cgcctcgcgctcgggcactccccgaccggggagctcctgctgccggagaacgtcaaccac
cagggctacacgctgcaccccgcgatccgcagcgactgggacgacttccgcgacctcatc
ggaccggacctgagccgcacgtcgaacgaggacctggtccgggctatcaagctcgtccgc
gggcagccgttcagcggatgcaacaccgtccgctggtggcagtggatctcgatcccgctc
gaagagatgatcgcggccgtcatggacgccgccgacgagctcggccggcgtgcgctggat
gagcgtgacagcgaccaggcccgcttcgccgcgcgggtcgcgcagtcggtcgacccgctg
aacgaggcagggtggcgtaccgagctccgcgccgcgatgcagaccggcgacacggacgag
ttccggcgcatcgtcgacgccatgtacgcgcgcgtcagcggcacggatcccgactacgag
ctcgacgacgagacccaggacctcgtcaccgccggcgaccggcagcagtag
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