Cordyceps militaris: CCM_00071
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Entry
CCM_00071 CDS
T03108
Name
(RefSeq) Recombination/repair protein Rad50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cmt
Cordyceps militaris
Pathway
cmt03440
Homologous recombination
cmt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCM_00071
03450 Non-homologous end-joining
CCM_00071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmt03032
]
CCM_00071
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_00071
DNA replication proteins [BR:
cmt03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CCM_00071
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CCM_00071
BRCA1-C complex
CCM_00071
NHEJ (non-homologous end-joining)
MRX complex
CCM_00071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SbcC_Walker_B
AAA_15
SMC_N
DUF948
AAA_29
COG6_N
AAA_16
AAA_13
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
18162106
NCBI-ProteinID:
XP_006665294
UniProt:
G3J744
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MSRIEKLSISGVRSFSPACREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK
GGAFIHDPKLCGEKEVLAQVKLQFRSINDRQHVATRSLQLTVKKTTRSQKTLDCSLVVLN
NGEKTTTSTRQAQLDEMIPERLGVSPAILDAVIFCHQDESLWPLSEPSVLKKRFDEIFEA
LKYTKAIENLKVLRKKQVEELGKLQNDEFHNKGNKDRGDRAEKRMTGLQAEIEAAREKCE
AITAHMQETQDKIKQKHEQANSFLQIVQNLGNKREQLDYRQDAVDELRQTIDELPEDDRS
LERQLVQYEESMRRQSEEAQRNKTQYGDLQQDLVKSRKSLSTKLAEQGKHQSDKEKHERQ
LKMRMEMVQEAAQHHGFRGYEDDLTDALIKQFNDKIQKLFAEKKRELERLQKENAAELDK
ASATISEFEGQKAARTQDRVSAKQRQGAIEKRTIVLQNEASSIDVDEGLKAILDGQLGEL
ESKFSQVHREFETAAWDNQISDENAKLWQLESESEKLGRELIECTRLASERAQLDFRRKE
LSDRKLKLTSLTETWRSKLDKVIGGDWSPEDLEAKFQALLAAQNKALQEARQQQEQTRQK
QARVDFKLKTVKETCEQKQTDQIECKKKVLQALQNVRDSAVIEDYTEEVSATEQQIETLR
DDLSLIDALKDYYTKCKRALDAKKTCLLCDRHFDDSQAASIDRLRVKIDRHLNSKTKIEA
EQDLSEASSTLQSLVAVRSQYDTYERLGKELPGLRDERKSIEADHESTERLLEEHDAVVA
AEEDKKRDMNDMSKTVSNITQTLREIKDSEGQVERIASQQQSVGTGRSADEIHDLQGTVS
EQMRASKNRVAKLSNDRQRARDQISTLELEKSELRNKISLTLGQLDKKQDLLGQIQSLKE
EQTHQREAIQRADEELEKVEPRITEARSIRDETLKRGRAKEQVVTESRDSVATSINEIKM
IESDIRDYEDRGGASNLASNQRAIATLEQNITTTETEISELTQRTNKLKQDIDNGDRTKK
NINDNLNYRKHLRMLETLRGEINELEDRNAHEDYERLQGEARALENQSNRLFAERGSVMG
SMKTKDEDLDRLLKEWEMDYKDAKQKYRESHIRVETTKAAIEDLAQCGAAVDKAVMQFHA
MKMAEVNRIAGELWQSTYQGTDIDTILIRSDNEGTTGRRNYNYRLCMVKQDAEMDMRGRC
SAGQKVLASIIVRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHNIIRTRQAQSN
FQLIVITHDEDFLRHMRCSDFCDSFFRVKRDDKQNSVISRESITKIF
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggattgaaaaactgtccatctccggcgtccggtcattcagcccggcctgccgt
gaagccatccagttcaacaccccactgaccctcatcgtcggctacaatggttccggaaag
acaaccatcatcgaatgtctcaaatatgcgacaactggcgagcttcctcccaacagcaag
ggcggcgcatttattcatgacccaaagctgtgcggtgaaaaagaggtcttggcacaggtc
aaacttcagttccgatccatcaacgaccgccaacatgtcgccaccagaagtttgcagttg
accgtgaagaaaacaacacgctcgcaaaagacgctcgattgctccctcgtcgtgctcaat
aacggcgagaagaccaccacgtcgaccagacaagcccagctcgacgaaatgatcccggag
cgacttggcgtctcgcccgctattctcgatgcagtaatcttttgccatcaagacgagtct
ttgtggcctctgagcgagccctccgtcctaaagaagcgattcgacgaaatattcgaagcc
ttgaaatatacaaaagccatcgaaaatctcaaagttcttcgtaaaaagcaagtcgaggag
ctcggcaagcttcaaaatgacgagttccataacaagggcaacaaagatcggggtgaccgt
gctgagaagcgcatgaccggtctccaagcggagattgaggctgctcgcgaaaagtgcgag
gccatcactgcccatatgcaagagacgcaagataaaattaaacagaagcacgagcaagca
aacagctttttgcaaattgtgcaaaatctaggcaacaaacgcgaacagctcgactaccga
caagatgccgtcgacgagctacggcagactatcgacgagcttcccgaggacgacagatca
ctcgaacgccagcttgtacagtacgaagaaagtatgcgccgtcaaagcgaagaggcgcaa
cggaacaagacacaatacggcgatctccagcaagatcttgtcaagtctcgcaaaagtctt
tccaccaagcttgccgagcagggcaagcaccagtcagataaggaaaagcacgagcgccag
ctgaagatgcgcatggaaatggtgcaagaggctgctcagcatcatggattccggggttac
gaggacgatttgaccgacgcgctcatcaagcagttcaacgacaagattcaaaagcttttc
gccgagaaaaagcgagagttggagcgtctgcaaaaagaaaatgcggctgagcttgacaaa
gcatccgcgactatttcagagttcgaagggcagaaggctgctaggactcaggatcgagtg
tctgccaagcaacgacaaggcgcaatcgaaaagagaacaatagtactgcaaaacgaagct
tcgtcaattgatgtcgacgaaggtctgaaggctattcttgatggtcagctgggagagctg
gaaagcaaattttcgcaagttcatcgagaattcgagacagcagcgtgggacaaccaaatt
tccgatgaaaacgcaaagctttggcagctcgagagtgaaagtgagaaactggggagagaa
ctgatcgaatgcacccgcctcgcgtcagaacgagcccagctggactttcgaaggaaggag
ctttctgaccgcaaacttaagctcacttcgctaaccgagacttggagatcgaagctggac
aaagtcattggcggcgactggtctccggaggacttagaggccaagttccaagctctactc
gcagctcagaacaaagcactccaagaagctcgccagcaacaggaacagacccgccagaag
caagcaagggtagacttcaagctcaagacggtcaaggagacctgcgaacagaagcaaaca
gatcaaatcgagtgcaagaagaaagtccttcaggcactgcagaatgtacgggattcagcc
gtaatagaagactacacggaagaggtctcagcaacagagcagcagatagagaccttgcga
gatgatctcagcctcattgatgccctcaaagactactataccaaatgcaagcgggcactt
gatgcaaagaagacgtgtctcctttgtgatcggcactttgacgacagccaggctgctagc
atcgaccgactacgcgtcaagatcgaccgacacttgaactccaaaacaaaaatagaagcc
gagcaagatctcagtgaggcctcttctacgctgcagtcactggtggccgtacgaagccag
tatgatacatatgaaagattgggcaaggagcttcctgggctgcgtgatgagcgcaagtca
atcgaagccgatcacgaatcaaccgagagactgcttgaagagcacgatgctgttgttgct
gccgaggaagacaagaagcgagacatgaacgacatgtcaaagactgtcagcaatattacc
cagacactacgggagatcaaagactctgaaggtcaggttgagcgcattgcttcccaacag
caatctgttggcactggccgcagtgccgatgagattcatgatctccaaggtactgtttca
gagcagatgcgtgcttctaaaaatcgagttgcaaaactgtcaaatgaccggcagcgggct
cgggatcagattagcacacttgagttggaaaagagcgaactacgcaacaagattagcctc
actctaggacaacttgataaaaagcaagatttgctaggccaaatacaaagtctcaaagag
gagcagacccaccagcgcgaagctatccagcgcgccgatgaggaactggagaaggttgag
ccgcgaatcacggaagcgcgctccattcgcgacgagactttgaagcgcggaagagccaaa
gagcaggtggttaccgagagccgggattctgtcgccacttctatcaatgagatcaaaatg
atcgaatctgacattcgagactatgaagaccgtggtggtgcctccaatttggcttcaaac
cagagggccattgccactctggagcagaatatcacaacgacggagacggagatttcggag
ctgacgcaacggacaaacaagctgaagcaagacattgacaatggtgatcgcacaaagaag
aacataaatgacaatctcaactatcgcaaacacttgagaatgctcgagactttgcgagga
gagatcaatgagctggaagatcggaatgctcacgaagactacgagcgtttgcaaggcgaa
gcacgtgcactcgaaaaccagtccaacaggctctttgctgaacgaggctccgtcatgggg
tcgatgaagaccaaagatgaggatctagatcggcttctcaaggagtgggagatggactac
aaggatgccaagcaaaagtaccgcgagtcgcatatccgcgtggagacgaccaaggccgcg
atcgaagacctcgcgcagtgcggcgcggctgtggataaggccgtgatgcagttccacgcg
atgaagatggccgaggtgaaccgcatcgcgggggagctgtggcagagcacgtatcagggc
accgacattgacacgatcctgatccgctccgacaatgagggcacgaccggccggcgcaac
tacaactaccggctgtgcatggtcaagcaagacgccgagatggacatgcgcgggcgctgc
tcggccggccaaaaggtgctagcgagcatcattgtgcgcctcgcactggccgagtcgttt
ggcgtcaactgcggcctcatcgccctcgacgagcccacgaccaacctcgaccgcgacaac
atcaagagcctcgccgagagcctgcacaatatcatccgcacccgccaggcccagagcaac
tttcagctcatcgtcatcacccacgacgaggactttctgcggcacatgcgctgcagcgac
ttttgcgacagcttcttccgcgtcaagcgcgacgacaagcagaatagcgtcatctcgcgt
gagagcatcaccaagattttctag
DBGET
integrated database retrieval system
