KEGG   Cordyceps militaris: CCM_00128
Entry
CCM_00128         CDS       T03108                                 
Name
(RefSeq) histone deacetylase RpdA/Rpd3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmt  Cordyceps militaris
Pathway
cmt03082  ATP-dependent chromatin remodeling
cmt03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CCM_00128
   03083 Polycomb repressive complex
    CCM_00128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmt03036]
    CCM_00128
Enzymes [BR:cmt01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CCM_00128
Chromosome and associated proteins [BR:cmt03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CCM_00128
   HDAC complexes
    Sin3A-HDAC complex
     CCM_00128
    BRAF-HDAC complex
     CCM_00128
    REST complex
     CCM_00128
    SHIP complex
     CCM_00128
    MiDAC complex
     CCM_00128
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CCM_00128
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CCM_00128
  Chromatin remodeling factors
   NuRD complex
    CCM_00128
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18162163
NCBI-ProteinID: XP_006665351
UniProt: G3J7K8
LinkDB
Position
Unknown
AA seq 638 aa
MGDEESNMAQLGSVALNGSSPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNL
YQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLF
EFCGISAGGSMEGAARLNRQKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFM
KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKHYSVNYP
LRDGITDDSYKSIFEPVIENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVSY
VKSFGLPTLVLGGGGYTMRNVARTWAFETGVLVGQDMDRTLPYNEYYEYYAPDFELNVRS
SNMENSNSREYLEKITAAVIDNLRSTGPAPSVQMQDVPRKPFGGMTDEEEAELDDLDEDE
NKDVRMTEHRWDKHIENGAEFEPSDDDELARANGATRQSSSKRNFNDFRKDSEDEDAGNS
AEAIEGKAVEANVEESHDVNDDTIEDLGAAEQDKEPAVESPEEQADKENTDGDGDIGMTD
SVPAEEDAKIKEEDVEIENAPAPAATAATPGDAEKPADDPVAENDKADAPKDVEKSTGEE
DESEKSEAKEKEEQPADAMDLDGDKEKEAESKVADSSS
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgggcgacgaagagtccaacatggcccagctggggtcagtggccctcaacggctcatcc
cccaagaaagtcgcgtatttctatgactctgacatcggtaactacgcatacgtcactggt
catcctatgaagcctcaccgcatccgcctggctcatagtcttatcatgcaatacaatcta
taccagaagatggagatttaccgcgccaaaccggcgactcgaggcgaaatgacacagttt
cacaccgacgactacatcgactttctacaaaaagtaactcctgataatatggacagctac
atgcgcgagcaaggcaaatacaacgtcggtgacgactgtcctgtatttgatggcctcttc
gaattttgtggcatcagtgcaggaggcagtatggaaggggccgcaaggctaaacaggcaa
aaatgcgacatcgccgtcaactgggctggaggtcttcatcacgcgaagaagtgcgaagcc
agcggcttctgctacgtcaacgatattgtactaggcattctcgagcttctgcgatttatg
aagcgtgtactttacatcgatatcgacgttcaccacggtgacggtgttgaggaggctttc
tacacaaccgatcgagtcatgactgtctctttccacaagtacggagaatatttccccggc
actggtgaacttcgtgacattggtgttggccaaggcaaacactactccgtgaactacccc
ctgcgcgacggcattacggacgactcttacaagtccatattcgaaccggttatcgagaac
gtcatgaaatattatcaacccgaggctgtagttttacagtgtggtggtgatagtctttct
ggtgatcgactcggctgcttcaacctcagtatggacggccacgctaactgcgtgagttac
gtcaagagcttcggcctgcctactcttgtccttggtggcggtggttacacaatgcgaaac
gtcgcaagaacatgggcttttgagacgggtgtgcttgttggacaagacatggatcgtact
ctcccctacaatgaatactacgaatactacgcccccgactttgagctaaacgtcagatca
tcgaatatggaaaattccaatagtcgcgaatacttggagaaaatcactgccgctgtcatt
gataatctccggagtacgggcccggcgccctcggtacaaatgcaagatgtgccacgaaag
ccgttcggcggtatgactgatgaagaggaagccgaattagatgatcttgatgaagatgaa
aacaaagatgtgcgaatgaccgagcaccgctgggacaagcacattgagaatggtgccgag
ttcgagcctagcgatgacgacgagctagcacgagcaaatggcgcaacgcgtcaatccagc
agcaagcgcaacttcaacgactttagaaaagacagtgaagatgaagatgctgggaattct
gccgaagctatcgagggcaaggctgtggaggctaacgttgaggaaagccacgatgtcaac
gacgacactatcgaggatctcggggctgctgagcaagacaaggagccggccgtggaaagc
cctgaggagcaagcggataaggaaaacaccgatggcgatggtgatatcggcatgaccgac
tctgtccctgctgaagaagacgcgaagattaaggaagaggacgtggaaatagagaacgcg
cctgctccggcagcaaccgctgcgactccaggagatgcagagaagccagccgacgatccg
gtcgcggaaaatgacaaagctgacgcgcccaaggatgtggagaagtcaactggtgaagag
gacgaatcggagaaatctgaggccaaagagaaggaggagcagccggcggatgcgatggac
ctagacggggacaaggaaaaggaagccgagtctaaggtggctgattcatcctcctag

DBGET integrated database retrieval system