Cordyceps militaris: CCM_00177
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Entry
CCM_00177 CDS
T03108
Name
(RefSeq) vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmt04131
]
CCM_00177
Membrane trafficking [BR:
cmt04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
CCM_00177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
SLBP_RNA_bind
Motif
Other DBs
NCBI-GeneID:
18162212
NCBI-ProteinID:
XP_006665400
UniProt:
G3J2I7
LinkDB
All DBs
Position
Unknown
AA seq
3191 aa
AA seq
DB search
MLEGLVAGLLNRFLGMYVKNFDPTQLKVGIWSGDVKLRNLELRREALDQLKLPINVVRGH
LGELTLVIPWSNIRGAPVKVFIEDVYLLASPKEEAEYDEDEEESRRQRVKMEKLDSAELL
KERNREGMSAEEQQKNQSFTQSLVTKIVDNLQVTVKNIHVRYEDSISTPGHPFALGLTLE
EFSAVSTDGQWKPTFIQDSSHVTHKLATLGALAVYWNTDTSLYADQDLDSIPRDEVLAKF
RKMIGKAEAVHGNHQYILRPVNGQAKIELDKSGDALVPKFKANLLFEEIGLVLDDDQYRD
ALMMVDLFHYFIRHQEYKSLKPKGVTVKDDPRAWFQFAGNSVLGKIHERNRKWSWDFFRE
RRDDRIRYIELFKKKKQQQPLTPEENEDMSKLEWKLDYEDLRFWRSLARNQLKKEDAAAL
KKPQQQEQTGWLAWMWGSKPEGNIQENEENTQMTEEQRKELYDMIDWNEKTAIAESVDLP
REAIKLCLEVSLSTGSFTLKKNANNRPTDLVSLHFDVFKAKALQRTDSTLLNVSLGGLRV
NDGTTADSLYPEIVRVKDAPSRERRKRLSLIELEASEEEPFFSFEVEKNPLEKEGDIAVV
GKLKPLEIVWNPNVVVGIVDFFRPPERHLESITALMESAGATVEGLREQTRAGLEFALEE
HKTINAELDLQAPLIIVPVSITTDDSTCLIVDAGHIHVNSELVEKSTMKEIQSKQKQSYN
DEDFKRLESAMYDRFLVKLTSTQVLIGPSIKETKRHLSQGGSQFHVVEQINLDFVVAISI
IPKAPNLTKLKVSGHLPLLHAMVSDSKYKNLMRIIDVAIPKLGDETPQPQPTRISRPRAT
SSMSNKSRRKTVQEKRLSSALDVLQPHTAVVLGDIDDDDEDNFQDATDGTANEHLKIQQR
IFQFDFKVDTLKGSLFRSDPERKKPDTLLVELVAERFDLAFYTRQYDMAAEVSLGAVTVD
DFVDNPSEEFRSIVSSGDSDDLQAGRSLVNVKFIRVKKESPEFMPVYEGIETNITTSVST
INLIVTRKTLLTLLDFILITFTNPDEESEVIQRTAPDSDESSSDGEEQLTEANKNAAAGS
IRVKIDLKSIRLILNNDGIRLATLSFNKADVGIFLRGKSMRISAKLGDLQLLDDVNQGVS
EDSNLRKLVTIQGDDLADFRYETFDPANIKAYPGYDSSIFLRAGSVKVNFLEEPFRKIID
FLVKFGKMQALYNAARQAAMNRANQIQQSPSRIHFDVVVNTPIVVFPRVVLPGEAKRDVI
TAYLGEIYAQNKFAPIDDSANADVAMMISVGIRNIKLTSELNYSDGRAEELEMIDQVDLG
FSITHAEHTPGIKRADTEIEGSVSDIKLRLTQHQLRFLMEISRSVPAAFAGEGDDAEAEA
AKMVDEGTLEHAKNAPPVQNNESDQTLVDLSPELSSIENAWTTLDLVFKANSIGLELILA
AEEDEPLGDLSASSLSRFSLDETKVKTRMLSDGSLEAELLIQSFSIFDTRPRDSNKFRRI
MTSNNKEAQQLTASVTMTGGRERNLIAMATIDNPRVIFALDYLFAIQKFASEGLMVDESS
PMDDESIGETIDSSDPESTQLTRTGSESRVSTSIASRRTDATEQNIPTAEAQKPIINMAF
RVNLVDAQVILIANPVTSSSEAIVLSIRRVLLSKQHALTFQVSQIGMFLCRMDQFETSRL
RIIDDFSIQLNMDSSQLELTNIHLQIEPLILRLSLRDILLVLQIIGKASELSGIDSKEPE
ETAAEQKAQRLRKAGLSQRASSGRTSTMAKTKATKTTAAKTSKPVQTVSRAITRREELSA
TVEGVRVVLIGDLHELPILDIGIKDFTATAENWSSSLKAEAAVDMYSNVYNFSKSSWEPL
LEPWQVGFGVARNPKSGLLSIDVTSKKTFDITVTTATIALASKSFNFLTTEQDVLGKARG
TEAPYKIRNYTGFEVSLESKSPISEEPITLRLDDGQEGPWSFEHWEKMRENLLTEANQNS
AVIQLEGSGFDPVKNVLLNREGEFLYGLRPKANGILHRLCVEVTLGSDNVKYVTLRSPLV
VENATQIPVELGVYDTQEGHLLKIEKIAPGESRPLPVGAVYEKSALVRPDGGFGYQWSTD
KLWWRDLLKQPTKQLVCKGGNGDPFYFQAHAEFSKSNPMTRTYPYMKIKLSAPVTIENLL
PYDFKYRIYDKNTKKDWSNFLRKGGVSPVHVVELSHLLLLSIDMQDTVFKASDFSIINPG
KSEDFRKETKLVVKDDQGLPLNLSLHYFKIPKSGGAFKVTIYSPYVVLNKSGLDLNIKAK
SFLQNARAAAGQSALVSRFDDENAKALPFMFSYGSSEDNRNRALLKFGDSEWSKPQSFDA
IGSNSEVVLNSATKNKEIHIGITVNSGEGKYKMTRVVTLSPRFVLENKLGEEIYVRESSS
PGFLTLAQGALRPLHFMQKGSVKQLSLCYAGVDSHWTAPFNIADIGTTHIKIAKPGQRQR
LIRAEVLMEDATLFVQLSMETKNWPFSIRNESDTEFTFYQANPTVEEDDDEDRSGWKPIR
YRLPPRSIMPYAWDFPAAKFRELVIASGGKERHVKLAEIGNQIPMKFLGSNAQQKIIDIN
VAADGPTQTLILSNFRTSQSVYKPKALSRTNTATDGFEVKDQDTGQTFRAQLKLSGIGLS
LINSQLKELAYVSLKDVQLRYSDSPVIQTVALEIKWIQIDNQLYGGIFPMVLYPSVVQKR
ANEVDAHPSLHAMVSRVKDDSYGVTYIKYASILLQQMTLELDEDFIFALLDFSNVKGASW
TMVDEEGKLCDESLDIPEPRQLQAGQDIYFEVLNIQPMQVDLSFMRTERVNAEDKTSTRN
PLMFVLNVLTMALGNVNDAPIRFNALMLDNVRVTPQVLIQNISNHYSQEVMYQIHKILGS
ADFLGNPVGLFNNISSGVTDIFYEPYQGLILSDKPEEFGLGIAKGAASFAKKTVFGFSDS
FSKFTGSLSKGLAAASLDKQFQDRRRITRARNRPKHALYGVAAGANSLFTSVASGVGGLA
SKPLEGAEQEGALGFFKGVGKGVLGLATKPAVGVLDMASNLSEGIRNTTTVFDGTELDRT
RFPRFISNDGVVRPFNAREAIGQYWLKQVDNGKYFDEQYVGHLELPREDMVVMVTYARIL
LIRSKRLTSEWDIPLKDIQTIAKERTGVSLILRGGANGPFVPVGGGSERNFLYKMVGVAV
EEFNRRFRGGE
NT seq
9576 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagggcttgttgccggcctcttaaaccgcttccttggcatgtacgtcaaaaac
tttgaccctacacagctcaaggtcggtatctggtccggtgacgtcaagctgcgcaatctc
gagctgcgccgcgaggccctggatcagctcaagcttcccatcaatgttgtgcgtggccac
cttggcgagctgaccctcgtcattccctggtccaacatccgcggcgctcccgtcaaggtc
ttcatagaagatgtctacctgctcgccagccccaaggaggaggctgagtacgatgaggat
gaggaggaaagccgccgccagcgcgtcaagatggagaagctcgacagcgccgaattgctc
aaagaacggaaccgcgaaggcatgagtgcagaagagcaacaaaaaaaccagagttttacg
caaagtctggtcacaaaaattgtcgacaacctccaggtcacggtcaagaacattcacgtt
cgatacgaggattccatctctacgccaggccaccccttcgccttgggacttaccctcgaa
gaattcagcgctgtcagcaccgacggccaatggaagccgaccttcatccaggattcatcc
catgttacccacaaacttgctaccctcggcgctctcgctgtgtattggaacactgatact
agcctatatgccgatcaagatctagacagcattcctcgtgacgaagtgcttgcgaaattt
cgaaaaatgattggcaaagcagaagcagtccatggaaaccaccaatacatcctgcggccc
gtcaatggacaggccaaaatcgaactcgataagagcggcgatgcgctagttccaaaattc
aaggcaaatctactatttgaagaaattggcttggtgttggacgacgaccaataccgcgat
gcactgatgatggtcgacctgttccattatttcatacgccatcaagaatacaagtcactg
aagcccaagggcgtcactgtcaaagatgatcctcgagcatggttccaatttgctggcaat
tcagtcttaggcaaaatccacgagcgaaaccgcaagtggtcctgggacttcttccgagaa
cgccgcgatgaccgaatacgctatatcgaacttttcaagaagaagaagcaacagcagcca
ctgacacccgaagaaaatgaagatatgtcaaagctcgagtggaaacttgattacgaagat
ctgcggttctggcgctcgctcgcccgaaaccagctcaaaaaagaggatgctgcggctctt
aagaagcctcaacaacaggagcagacaggctggcttgcatggatgtggggatccaagccc
gaaggcaacatccaagaaaacgaagaaaacacgcaaatgacagaggagcagcgcaaggag
ctttacgacatgattgattggaacgaaaagaccgcaatcgccgaatctgttgatctaccc
agggaagctatcaaactttgcctggaagtctcccttagcacgggtagctttacactgaag
aagaatgccaataacaggcccacggatcttgtcagtcttcactttgacgtcttcaaggcg
aaggctttgcaaaggacagactcaacactgctcaatgttagcctgggcggattgcgagtc
aacgatggtaccacggccgatagtttgtaccccgagattgttcgtgtcaaagatgccccg
tctagagaacggcgaaagagattgtctttgatcgaacttgaagcctcagaagaggagccc
ttcttctcgttcgaggtggaaaagaatcccctggaaaaagagggcgatattgccgttgtc
gggaaactgaagcctcttgagattgtttggaacccaaatgttgttgttggcatcgtcgat
ttcttcaggccgccggaaagacacctagagtctatcactgctcttatggaatctgccggc
gccactgtcgagggcctcagagagcagacacgagccggtctcgaatttgccctcgaagag
cacaaaaccatcaacgctgagcttgatttgcaagcacccttgataatcgtacccgtcagc
attacaaccgacgactcgacttgtctgattgtcgatgctggtcatattcatgtcaacagc
gaactggttgagaagagcaccatgaaggaaatacagtccaagcaaaagcagtcttacaac
gatgaagacttcaaacgcctggagtctgcaatgtacgacaggtttctcgtgaaactaaca
tcgacacaagtcctcatcggcccgtctatcaaagagacaaagcggcacctttcacaaggc
ggatctcaatttcacgttgttgagcagatcaaccttgattttgtcgtggctatatcgatc
atccccaaggcaccgaacctgacaaagctgaaagtatctggtcatttgcctctcctgcat
gcgatggtgtccgactccaaatacaaaaacttgatgcgaatcatcgacgtcgcgattccg
aaattgggagatgagaccccccagccccagccgacgcgtatatcacgcccacgagcgact
agctcaatgtccaacaagtctcgccgaaaaactgtacaagagaagcgtctctcatctgcc
cttgatgtcttgcagccgcatactgctgttgtattgggtgatatcgacgatgacgacgaa
gacaattttcaagatgccaccgatggtacggccaacgagcacttgaaaatccagcagcgt
attttccagtttgacttcaaagtcgatactctcaagggttctctgttccgaagcgaccct
gagagaaagaagccagatactctacttgtggagctcgttgctgaacgttttgacttggcg
ttctataccagacaatacgatatggctgccgaagtgtccctcggtgcggtcaccgtggat
gactttgttgataacccctctgaagaattcaggtccatagtctcgtctggagacagcgac
gacttacaagcgggccgaagtctggtgaatgtcaaatttataagagtcaaaaaggaatca
ccagaattcatgcccgtatatgaagggattgagacgaacatcacaacatcggtgtcaacc
atcaacctaattgtcaccagaaaaacactactcacacttctcgattttattttgattaca
ttcactaatcctgacgaggaatcagaagtcattcaaaggacagcgccagactcggatgaa
agctcgtcggatggagaggagcagttaaccgaggccaacaaaaatgccgctgcaggctct
attcgcgtcaagattgacctcaagagtattcgtttgatcctgaataacgacggaatccga
ctcgcgacgctctcctttaacaaggcggacgttggaatcttcctacgcggcaagtcgatg
cgcatatctgctaaactcggagacttgcaacttctcgacgatgtcaatcagggagtttct
gaggactcgaaccttcgcaagctggtgacaattcaaggggacgatttggccgacttcaga
tacgagacttttgacccagcaaatatcaaggcttacccaggctatgatagctccatcttc
ctgagggccggttcggtgaaggtaaactttctggaagagccttttagaaaaatcatcgac
tttcttgtcaagtttggtaagatgcaagcgctttacaacgcggctcgtcaagcggctatg
aaccgtgcgaaccagattcaacagagcccaagtaggattcacttcgatgttgtggtaaat
acacctatcgtcgttttccccagagtcgttcttcctggcgaggccaagagagatgttatt
acagcctacctcggtgagatttacgcacagaacaagttcgcacccatcgacgacagtgcc
aatgcagatgtcgccatgatgatatctgtaggtatcaggaatattaagctcacctcagaa
ttgaactattctgacggaagagccgaagaattggagatgattgaccaagtcgacctcggt
ttcagcattacacatgcggaacacacgcccggcatcaaacgcgccgacacggagattgaa
ggttccgtttccgacatcaaacttcgtcttacacaacaccagctgcggttcttaatggag
atttcacggtctgtcccggccgcctttgctggggaaggcgatgatgcagaggcggaagct
gccaagatggtcgacgaaggcactctcgagcacgctaagaacgctccaccagtgcagaac
aatgaatcagaccaaacactggtagatctgtctcccgagctctcctccattgaaaatgcc
tggacaactctcgatcttgtgttcaaggcgaatagcatcgggttggaactgattttggct
gccgaggaagacgaaccccttggcgatctgtctgcatcaagtttgtcgcgtttctctctg
gacgagaccaaagtcaagacacgaatgctttccgacggatcacttgaagcagagcttctg
atacagtcattttctatcttcgatactcgtccgcgcgactcgaataagttccgtcgcatc
atgacatcgaacaataaagaagcacagcagttgacggccagtgttaccatgacaggtggc
agagagaggaatttgattgcgatggcaacaattgacaaccccagagtcatctttgccttg
gattatctgtttgctattcagaagtttgcttccgagggcctgatggttgacgaatcaagt
cccatggatgatgagagtattggagagactattgacagctctgatccggagtcaacacag
ctcactcggacgggttctgagtctcgagtgtctacctcaatcgcgtcgagacggacagac
gcgaccgagcagaatatcccaacggcggaagcccaaaagccaatcataaacatggcgttc
cgtgtcaacctggtggatgcgcaagtcattctcattgccaatccagtcacttccagctct
gaagctattgtacttagcatcagacgggtccttttatcgaagcagcatgcacttaccttc
caagtctcacaaatcggcatgttcctctgccgcatggatcagtttgagacgtcaagattg
cggatcatcgacgatttctccatccaattgaacatggacagctctcaactggagttgact
aatattcacttgcaaatcgagccactcatcctgcgcctgtccctacgtgatatccttctc
gtgctccaaattattggcaaagcaagtgagctgtcaggcattgattcgaaagaaccagaa
gagactgctgccgagcaaaaagctcaaaggctccgtaaagcaggcctgagccagagagcg
tctagtggccgcacatcgactatggccaaaaccaaagctacaaaaacgacagcagctaag
actagcaaaccagtccagactgtgagcagagctatcactagacgcgaagaactatctgcg
actgtcgagggcgtgcgtgttgtcctaatcggtgacttgcacgaactgcccatccttgat
attgggatcaaagacttcaccgccactgctgaaaactggtcgtcaagtctcaaagccgaa
gccgccgttgacatgtactccaatgtctacaacttctccaagtccagctgggagccgctt
ctggaaccctggcaagtcggatttggtgtcgcgcgcaatcccaaatcgggactgctttcc
atcgatgtcacctccaagaagacctttgacatcaccgtcaccacagccacgattgctctt
gcctcaaagtcgttcaatttcctcacaactgagcaagatgttcttgggaaagctcgcgga
acagaagcgccctacaagattcgaaattataccggctttgaggtatctcttgagtcgaaa
agcccaatcagtgaggagccgatcacattgcgcctagatgacggccaagaaggcccgtgg
agctttgaacactgggaaaagatgcgagagaacctcttgactgaagcgaatcaaaacagc
gccgtcatccagctggaaggcagtggctttgaccctgtgaagaacgtacttctgaacaga
gagggcgaatttttgtatggacttcgaccgaaagccaacggaatccttcaccggctttgt
gttgaggtgactctcggcagcgacaacgtcaaatacgtgactttgcgctctcccttggtt
gtggaaaatgcgacgcaaatccctgtcgagctcggcgtttatgatacccaagagggacac
cttctgaaaattgagaagattgcgccaggcgagtcgcgacctctcccagtcggcgctgtg
tacgaaaagtcagcgctggttcgccccgatggcggattcgggtatcaatggagtactgac
aagctatggtggcgcgatttgctgaaacaaccgacaaagcaacttgtttgcaaaggtggc
aatggggaccctttctatttccaagctcatgcagagttcagcaaatcgaaccccatgacg
cgaacctatccttacatgaagatcaagctctctgccccagtcaccattgagaatctactg
ccatacgatttcaaatacagaatctatgacaagaacacgaagaaagattggtccaacttc
ttgcgtaaaggaggcgttagtcctgtccatgttgtcgagctttcgcatctgttacttttg
agcatcgacatgcaagatactgtcttcaaagcaagcgacttctcaatcatcaacccaggc
aaaagcgaagacttccgcaaggagaccaagcttgtggtcaaggatgatcaaggcctgccc
ctcaacctcagcctgcattatttcaagatacccaagagtggtggggctttcaaagttacc
atttacagtccctatgttgtcctgaacaaatccgggctggacttgaacatcaaggccaag
agtttcttgcaaaatgcccgagccgcagctggtcagtctgcacttgtcagccgcttcgat
gacgaaaatgccaaggcgctgccgttcatgttctcctatggcagcagcgaggataatcgg
aatcgcgctctgctcaaattcggggactcagaatggagtaaaccacagagctttgacgcc
attggaagtaactcggaagtggttctcaattccgctactaaaaataaagaaatccacatc
ggtattactgtcaactctggagagggtaaatacaagatgacgagagtcgtgacactttcg
ccacggttcgtgctcgagaacaagcttggcgaagaaatctatgttcgggagtcaagctcg
cccggattcctgactctggctcaaggagcgctccggcccttgcatttcatgcagaagggc
tccgtcaagcagctaagtctttgctacgccggcgtcgatagtcactggacggcaccattc
aatatcgcagacattggcactacacatatcaagattgccaaacctggtcagcgccaacgc
ctcattcgcgccgaggttctgatggaagacgctactttgttcgtccaactgagcatggaa
acaaagaactggcccttctcgatccgcaatgaaagtgacaccgagtttacgttctaccaa
gccaaccctacggttgaagaggatgatgacgaggacagaagtggttggaagccaattcgc
tacagacttccaccgcgaagcatcatgccctatgcttgggactttcccgccgcgaaattt
cgggaacttgtaattgcgtcgggtggtaaggaacgtcacgtcaagttggccgagattggc
aatcaaatccccatgaaattcctcgggtccaacgcgcagcagaagattatcgacatcaac
gtcgcggcagatggaccaactcaaacactgatcctcagcaacttccgcactagccagagt
gtgtataagccgaaggctttgtcgcggacaaacactgcaacggatggcttcgaagtcaag
gaccaagataccggacagacattccgcgcccaactgaaattgtcaggtattggtctgtcg
ctgatcaactctcaactgaaagagcttgcatatgttagtctgaaggacgtacagcttcgt
tacagcgattctcccgttattcaaactgttgccttggaaatcaagtggatccaaatcgat
aaccaactgtacggcggcatcttccccatggttttgtacccaagtgtggtgcagaagagg
gcgaatgaggtcgacgctcacccgtcgctgcatgcaatggtcagtagagtcaaggatgac
tcctacggtgtcacatatatcaagtatgcatctattctgttgcaacagatgactctcgag
ctggacgaagactttattttcgctcttctcgacttttcgaacgtcaagggtgccagttgg
accatggtggatgaagaaggcaaactctgtgacgagagtctcgatattcccgaaccacgc
caactgcaggccggacaggacatatactttgaggttctaaatattcagccaatgcaggtt
gatctcagtttcatgagaacggagcgtgtcaatgccgaagacaagacttcaacacgcaat
ccgctcatgtttgtgctgaatgtcttgaccatggctcttggcaatgtcaacgacgcaccg
attcgtttcaacgccctcatgctagacaacgtgcgtgttacaccgcaggtcttgatacaa
aacatctccaaccactacagtcaagaagtcatgtatcagatccacaagattctcggttca
gccgatttcttaggtaatcccgttggcttgttcaacaacatttcctcaggagttacagac
atcttctacgagccttaccaaggactgattctatcggacaagcccgaagaatttggactc
ggtattgccaaaggtgccgcatcatttgccaaaaagactgtatttggcttcagtgacagc
ttctccaagttcaccggcagtcttagcaaaggtctggcggcagcatcgctggacaagcaa
tttcaagaccgccgtcgcattacgcgggcgagaaaccgaccgaagcatgcactttatggt
gttgctgcaggcgccaacagcttattcaccagtgttgcgtctggtgtcggcggcctggct
agcaagccgctcgagggcgctgagcaagaaggcgcgttgggcttcttcaaaggtgtcgga
aagggtgtacttggtctcgcaacgaagccagccgtaggtgtcctagatatggccagcaac
ttgagtgaaggtattcgcaacaccacgacagtctttgatggaacagagttggaccgcaca
cgattcccacgcttcatttccaacgacggtgttgtgcgcccgttcaatgcccgtgaagcc
attggccagtactggctcaagcaagtcgataacggcaagtactttgacgagcagtacgtt
ggccatctcgagcttccccgcgaggacatggtggttatggtgacgtatgcgcgcattctg
cttatccgctcgaagcgtcttacgagtgagtgggacattccgctcaaggatatccagacc
atcgccaaggagcgtaccggagtcagtctcattctgcgcggcggcgctaacgggccgttt
gtgccagtcggaggcggcagcgaaagaaatttcttgtacaagatggtgggagtcgccgtg
gaggagtttaatcggcggtttagaggaggcgagtaa
DBGET
integrated database retrieval system
