Cordyceps militaris: CCM_00360
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Entry
CCM_00360 CDS
T03108
Name
(RefSeq) ubiquitin-protein ligase Ufd4, putative
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cmt
Cordyceps militaris
Pathway
cmt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CCM_00360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmt04121
]
CCM_00360
Enzymes [BR:
cmt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
CCM_00360
Ubiquitin system [BR:
cmt04121
]
Ubiquitin ligases (E3)
HECT type E3
CCM_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
HEAT_GCN1
HEAT_EZ
Arm
INTS7_N
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
18162395
NCBI-ProteinID:
XP_006665583
UniProt:
G3J3N0
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
MSPRITRSSARQAASQVAQTSAAPNTAKPTPESADRSASPNTPQLPSRNKRKASAGSKLP
ANTTRPSSSDRTSKRQKLPEETATALPLSANTKAPPKAHRKGNIFPMMDGSNDHTGPRET
TNDHLPSDNLDRPESRSKKSTHSLPDIQDERSSSSRRSKRLAAETDEDIVMGGTDGNRDD
VESTPDASTNQTNDDEGEDANPDEGPAEHHDDDEDDHGEEEEEEEDDDDDENDRGDGFGE
TDGGDPFGAFGAAGLSHTLRALTGMMSGLTARLRELLNNLREDDLSIQVIALQELSELLL
VSNEDNLAGHFSPDAFVRELVQLMHKEESPEVMLLACRCLANLMEALPASVSNVVYGSAV
PVLCSKLLEISFIDLAEQSLSTLEKISVEFPSSIVREGGLTACLSYLDFFATSTQRTAVT
IAANCCRNIPDDSFPVVRDVMPILLNVLSSNDQRVVEQASLCVSGIVESFKHQAAKLEEL
VSVDLLRAVLRLLVPGTTNLIGSSIHTQFLRVLAFTARASPQLAAELFKLQVVETLYQIL
TGVSPPSGTEDVASKLDSVVIMQALIHRPREQIIETLNVICELLPGLPKDADPVYGDFVE
FHGIQEPAASTDDTRQSPAERRLSLLNNCKDEVRRFALIIFPTLTDVFSSTVNLSVRQKV
LQAQIKMLSNLDEKILEEALVPVPYASFLASILSQQDHPSLVMLGLQATELLLSRLHRIY
RYQLYREGVILEIEKLSAQAPEGSADDLPKRTDDGNARESSSTSEDEDEEAEDEERGDEN
NEGDEGDQDDEDENVQVEQEQLEPETAEPEDDEDENHDNQEQAENPGDESPVSSGSSSSS
EPVAPPRRYLSDSRATKTLICQVAKKFLDSHENEEHGRDMKAKASLIMDGLTKLADDLEA
FYLRRSSADLSPSAGRVLFSRLAAQFDTDVLESVTSAELLSSGLVRSLMEVLSNPDEELA
RLAQSTFLEVFMGKSVKSKPKTATAESPVTPFSMMIHKLQDLLTPDDDGEQSTLECADEK
QISEDEEDLADASALDAIVGELEDMDEEPDAPTLEDPSAVDFELATTGGVTARKEDGTKI
ATPASTEKRPVEQKQPPSASTPAGSSRPMSYASVLQTVPQDWHIEFSLDDKVISNETTIY
RAVFLSATKTEDQHISRSIWSATHPIKFKRVPGPPWAESVPVTTNTEAESDSPDGIPASL
AKNPTTASILRLLNILHELNENIEDVLLADDQQIVTLHVEPPSQFVSTKLTAKLNRQLEE
PLIVASSCLPSWSEDLARLYPFLFPFETRHLFLQSTSFGYARSMAKWQNAQAEENRRDRH
NERPFLGRLQRQKVRISRLKILESALKVMELYGASQSILEVEYFEEVGTGLGPTLEFYST
VSKEFAKKKLRLWRDVDNTGSDEFVSGPSGLFPRPLSAEELSTPNGERILHLFKIIGKFI
ARSMIDSRIIDIHFNPTFFRISDVVAPGVKPSLGAVKVVDPGLARSLKAIKKYSIAKKDI
DEDPNRTPAQKVADTENISIDGVRLDDLCLDFTLPGYPGIELEANGSQKRVTIDNVDAYL
DKVIDMTLGSGVRAQVDAFRTGFSQVFPYTALSAFTPAELVALFGKVNEDWSLETLTDSI
KADHGFNMDSRSVKDLLQVMSEFDLSERREFLQFITGSPKLPIGGFRSLTPMFTVVCKPS
EHPYTSDDYLPSVMTCVNYLKLPDYTDHDTMRRRLLTAMKEGQGAFHLS
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctagaatcaccaggtcgtctgcccgccaagctgccagtcaggtggcccagact
tcggcagctccaaacaccgcgaaacctacaccagaatccgccgatcgctcagcttctcca
aacacccctcagctaccttctcgcaacaaacgcaaagcttcggcagggtctaagctacca
gccaataccacacgtcccagctcctcggaccggacatctaagaggcaaaagttacccgaa
gaaacggccaccgccttgcctctcagcgcaaacacaaaagcgccgcccaaggctcaccgg
aaaggaaacatttttcccatgatggacgggtccaacgaccacactggtcccagagaaacc
acgaatgaccatttaccatccgacaatctggaccgaccggaaagtcgcagcaaaaagtca
actcatagcctccctgatatccaagatgagcgctcgtctagctctcgacggtctaagcgt
ctggccgccgaaacggatgaagacattgtaatgggtggtacagacggcaacagagatgac
gttgaatcaactcctgatgcctctacaaatcaaacgaatgacgacgagggtgaagacgcc
aaccctgatgagggcccagctgagcaccacgacgacgatgaagacgaccatggcgaagag
gaagaggaggaagaggatgacgatgacgacgaaaatgaccgcggtgacggcttcggcgaa
accgatggtggtgacccctttggcgcgttcggagctgcaggactgtcacacacgcttcgt
gctctaacgggaatgatgtccgggttgactgctcgtttgcgtgagcttctcaacaacctt
cgagaagacgatctctctatccaagtcattgctttgcaagaattatccgagctcctcttg
gtttccaacgaagataatctcgctggacacttttcacccgatgcctttgttagagagcta
gtccagctgatgcacaaggaagagagtccagaagtaatgcttcttgcttgccgctgcctt
gccaacctgatggaagccttaccagccagcgtttcgaacgttgtctatggaagcgcagtg
ccagtgctgtgctcaaagcttttagagatttccttcatcgatttggctgagcaatccctc
agtaccttggaaaaaatatctgtcgagtttccatccagcattgttcgtgagggtggtctc
acggcctgtttatcctacctcgacttctttgctaccagcacccagagaactgcagtaact
atagccgccaactgctgcagaaatatccccgacgattccttcccagtcgtccgagatgtc
atgccaattcttctcaacgtcctcagcagtaatgaccagcgagttgtcgagcaggcctcg
ctctgtgtctctggcatcgtcgaaagtttcaaacatcaagccgcaaaactcgaagagctt
gtcagcgttgatctgctccgcgctgtcttgcgcttgctggttcctggtactaccaatcta
attgggtctagcatacacacccagttcctccgcgtcttggccttcactgctcgagccagt
ccacagcttgccgcagaacttttcaagctgcaggtagtcgagactctttaccaaattctg
acgggcgtttccccaccaagcggcacagaagatgttgcctccaaacttgacagcgtcgtc
atcatgcaagcccttattcaccgaccacgtgaacagatcatcgaaaccctcaacgtcata
tgcgagttacttcctgggcttcccaaagacgctgatccggtgtacggcgactttgtcgag
ttccatggcattcaagaacccgccgctagtacagacgacactaggcaatctcctgctgaa
aggcgcctatcactcctcaacaactgcaaagacgaagttcggcggtttgccctgatcatt
ttccctacccttacagatgtcttctcaagcactgtcaatttgagcgttcgccaaaaggtg
ctccaagcacagatcaaaatgctatctaatcttgatgagaagatcctggaggaggctctt
gtccctgtgccgtacgcttctttcctcgcttctattctttcacaacaggaccatcctagt
cttgtcatgctcggcttacaggctacggaactacttctcagccgcctccacagaatatat
cgctatcaactgtacagagaaggtgtcatccttgaaatcgagaaactgtctgctcaagca
cccgaggggtctgctgatgatctacctaagaggaccgatgacggcaatgccagagaaagc
tcgtccacgtcagaagacgaggacgaggaggcagaagacgaggaacgtggcgatgaaaac
aacgaaggcgatgagggcgaccaggacgatgaggacgaaaacgttcaggtcgagcaagaa
caacttgagcccgagactgccgaacccgaggatgacgaagacgagaaccacgataaccag
gaacaagccgaaaaccctggtgatgagtcccccgttagctccggctcttcctcatcctct
gagccggtcgcacctccccgcaggtatctttccgattctcgagccacaaaaactctcatc
tgccaggttgccaagaagttcctagactctcatgaaaatgaagagcatggtcgtgacatg
aaggccaaagcgagccttattatggacggcctaactaagctggccgatgatctggaggca
ttctatttgcgacgctcgtcagccgatctctcgccatccgctggaagagttctattctcc
cgattagcggcccagtttgatactgatgtcctagagagcgtgacgagtgcagagcttctt
tcctctggtcttgtacggtcactgatggaagtactgagtaatcctgatgaagagttggct
cgtttggcgcagtcaaccttcctggaggtctttatgggcaagagtgtcaagtccaagcca
aagacagcgacggctgagtctcccgttacgccattcagcatgatgatccacaaactgcaa
gacttgctcactcctgatgacgacggcgagcaaagcaccttggagtgtgctgatgaaaaa
caaatcagcgaagatgaggaggatcttgccgatgctagcgctctagatgccattgttggc
gagctcgaggatatggacgaagagccagatgctcctaccctcgaagatccttctgctgtt
gacttcgagcttgccacaactgggggtgtgacagctcgcaaggaagatggtaccaagatc
gcaactccggcgagcaccgagaagcgccctgttgaacagaagcagcctccatcagcttct
acaccagccggttcatcgcgccctatgtcttatgcgtcggttctacaaactgtgcctcag
gactggcacattgaattctctcttgatgacaaagtgatctccaacgagaccactatttac
cgagcagtgtttctgtccgcgaccaaaacagaagatcagcacattagccggagcatatgg
tctgccactcaccctatcaagttcaaacgggttcctggcccaccatgggcggagtcggtg
ccagtcaccacaaacacggaggcggagtccgattccccagacggcattccggcgtccctc
gccaagaatcccactaccgcctccattctccgacttctgaacattctgcatgagctcaac
gagaatattgaagacgttttgctcgcagatgaccaacagattgtcaccctgcatgttgaa
ccgccttcccaatttgtcagtacaaagctgacagccaagctcaaccgccagctggaagag
ccgctcatcgtggccagtagctgcttgcctagctggtccgaggatttggctcgtctgtac
ccgttcctctttccatttgagacgcgtcatctcttccttcagtccacctcgtttggatat
gcccgatcgatggcaaaatggcagaatgcgcaggccgaagaaaaccgccgcgatcgccac
aacgaacgccctttcttgggacgcctgcaaaggcaaaaggttcggatttctcgcctcaaa
attctcgaatctgccctgaaggtcatggagctatacggtgcttcgcagagtatacttgag
gtcgaatacttcgaagaagtcggtaccggtcttggaccaaccttggagttttactctact
gtttccaaggaattcgccaaaaagaagctacgtctctggcgggatgttgataacacgggt
tccgacgaatttgtgtctggtccatctggacttttccctcggccattgagtgcggaagaa
ctgagcacacctaatggagagcgtattctgcacttgttcaagattattggcaagtttatt
gcacgatccatgattgactcgcgcatcattgacatccacttcaatcctaccttcttccga
attagtgatgttgttgcaccaggtgtgaagccctcgttaggcgccgtcaaggttgttgat
cctgggctcgcaagatcactcaaggcaatcaagaagtactccatcgccaagaaggacata
gacgaagatccgaaccgaacaccggcgcaaaaggtcgctgatacggagaacatttctatc
gacggcgtccgattggacgacttgtgcctcgactttacgcttcctggctatcctggcatc
gagctagaagcaaatgggtcgcaaaagcgcgttacaattgataatgttgatgcttaccta
gacaaggttatcgacatgacgctcggctcgggcgtgcgcgctcaagtcgatgcattccgg
actggcttctcccaggttttcccgtatactgccttgagtgcctttactccggctgagctg
gtcgcgctcttcggcaaagtaaatgaagactggtccctcgaaaccctcaccgactccatc
aaggctgatcatgggttcaacatggacagccgcagcgtcaaagatcttttgcaagtcatg
agcgagttcgacctcagcgagcgccgcgaattccttcaatttatcacaggtagcccgaag
ctccctatcggaggtttccgcagcctcacgccaatgtttactgtcgtctgcaagccgagt
gaacacccatacacctcggacgactacttgccgagtgtaatgacctgtgtcaactatctc
aagctcccagactatacagaccacgataccatgagaaggcggctactcaccgctatgaag
gaagggcaaggagctttccatctttcctaa
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integrated database retrieval system
