Cordyceps militaris: CCM_00384 Help Entry CCM_00384         CDS       T03108                                  Name (RefSeq) pre-mRNA splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism cmt  Cordyceps militaris Pathway cmt03040   Spliceosome Brite KEGG Orthology (KO) [BR:cmt00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CCM_00384  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmt03019]     CCM_00384    03041 Spliceosome [BR:cmt03041]     CCM_00384 Messenger RNA biogenesis [BR:cmt03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      CCM_00384 Spliceosome [BR:cmt03041]  Complex B   Other components    Prp19-related factors     CCM_00384  Complex C     CCM_00384 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_8 RPN7 AbiH Motif Other DBs NCBI-GeneID:  18162419 NCBI-ProteinID:  XP_006665607 UniProt:  G3J3Q4 LinkDB All DBs Position Unknown AA seq 847 aa AA seqDB search MAAMVANGQAHLRQNLHLVTNEDSVYEQDIIRDPSTIKPWLVYIEFKSRYGNALEKAFVM ARACAQLPRSYKLWKMVSGGDAIKLIILCAMTNQPQYLEFRVKHVSKLNSAMFNNEYNKV NALFEQALILLNKMPRIWEMYLAFLMKQPIVTTARRVFDRALRALPISQHNRIWALYIPF ANAASGETAVKIWRRYMQVHPEHAEDFIELLIKAGLYTEAATTYIKILNNTKFVSKNGKG HFELWNELVELLVSHATNVQTGHETGIDVEAIIRSGIARFSDQRGKLWAGLATYWIRCGS FERARDTFEEGITSVMTVRDFTLIFDSYVEFEESVIGALMEMATARAQKGIDDEEADFEL DIRMMRFEHLMDRRPFLLNDVLLRQNPNQVLEWEKRVALWGDNKAEAVQTYTDAIAKIQP KHAIGPFHQLWTNYAKFYEAGGDIRAARIIMEKAVKVPFKSVAELADMWIEWAEMELRNE DFDEATRIMAKAVQAPKRSNVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTMEDVKKV YERIFELRIATPQTVVNYANLLEENEYFEESFKIYERGLDLFSYPVAFELWNMYLTKAVD RKIGIERLRDLFEQAVEDCPPKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVSDEDR ADMFHFYITKSASNFGLPSTRPIYERAITALPDEEAKDMCLKFADMEKRLGEIDRARAIF GHASQFCDPRTNADFWSKWESFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALAK SQAAAAAAGQEMDADTQDAMAALERQARAPQGFVAASTGPVGGGVQDTKPAVAANPDAID IDSGDDE NT seq 2544 nt NT seq  +upstreamnt  +downstreamnt atggcagctatggtagcaaacggacaggcgcacctgcgccaaaacctccatcttgtgaca aacgaggactccgtctacgaacaagacatcatacgtgacccatcaacgataaagccatgg ctcgtgtatatcgaattcaagtcccgctatggaaatgccctcgagaaagcctttgtcatg gcgcgtgcctgcgcccagctccctcgatcgtacaagctatggaaaatggtgagtggcggc gacgccataaaactcataatcctttgtgcaatgactaaccagccgcagtatttggagttt cgtgtcaaacacgtttcgaaattaaactctgccatgtttaataacgagtacaacaaggtc aacgcgctcttcgaacaggctctgattctactcaacaagatgcctcgaatctgggaaatg tacctggcttttctaatgaagcagccgattgtgacgaccgcccgtcgagtttttgaccga gccctacgcgccctgccgatatcccagcacaaccgcatctgggccctgtacattccattt gccaacgctgcgtcaggcgagaccgccgtcaagatctggcgtcgctatatgcaggtacat cctgaacatgccgaggactttattgagcttctcatcaaggctggactgtacaccgaggct gcgacaacgtacatcaagattctcaacaacacaaaattcgtgagcaaaaacggcaagggc cactttgaactttggaatgagctggtggaattgctcgtgagccatgctaccaatgtccaa actggccacgaaactggtatcgatgtcgaggccattattcgcagcggaattgctagattt tcagatcaacgaggcaagctctgggccgggttggcaacctactggatccgatgtgggagt tttgagcgcgcgcgcgatacctttgaagagggtatcactagtgtcatgaccgtccgcgac tttacactcatctttgactcttatgtagagtttgaagagtctgtaattggcgccttaatg gaaatggcgactgcccgcgcccagaaaggtatcgacgatgaggaagcagactttgagctc gatatccgcatgatgcgattcgagcacctgatggaccgacggccgtttctcctcaacgac gtgctacttcgacaaaatcccaaccaagtgctggaatgggagaagcgagtggcactctgg ggcgacaacaaggccgaagctgtacagacctacacagatgccattgccaagattcaaccg aagcatgccattggcccgttccatcaactttggaccaattatgcaaagttttatgaagca gggggcgatatccgcgctgctcgaatcatcatggagaaggctgtcaaggtgcctttcaaa tcagtcgcagagcttgccgacatgtggattgaatgggctgagatggagctccgaaacgaa gactttgacgaggctactcggatcatggccaaggctgttcaggcgccgaagcgatcaaac gtcgactattttgatgagacgctctcgccacagcagcgagtacacaagagttggaagttg tggagcttctacgtggatctcgtcgagagtgtttcgacaatggaggatgtaaagaaggtg tatgaacgtattttcgagctccgcattgccacgccacaaaccgtggttaactatgccaac ctactggaggaaaatgagtactttgaggagtcgttcaagatttacgagagaggtctggat ttgttcagctatcccgtggcgtttgagctgtggaacatgtacctgaccaaggctgtggat cgcaagattgggattgagcgactgcgtgacttgttcgagcaggcggttgaggactgcccg cccaagttcgccaagaccatctacctgatgtacggcaacctggaggaagaacgcggactt gcgcgtcacgcgatgcgcatctacgaacgtgcgacgagagcggtttctgacgaagaccgg gccgacatgtttcacttttacatcaccaagtcggcttccaactttggtcttccgtcgacg cgaccgatttacgagcgggccatcaccgcgctgcccgacgaggaagccaaagacatgtgc ctcaagtttgcggacatggagaagcgactaggcgaaattgaccgcgcgcgcgccatcttt ggccacgcgtcgcagttttgcgacccgcgcaccaatgccgacttttggagcaagtgggag tcgttcgaggtgcagcacggcaacgaggacacgttcaaggagatgctgcggatcaagcgc agtgtgcaggcgcagtacaacacggatgtcaactttatcgcctcgcaggccctggcaaag agtcaggcggcggcggcggcagcaggtcaggagatggacgccgacacgcaagacgccatg gcggcgctggagagacaggcgcgcgcgccgcaagggttcgtggccgcaagcacgggaccg gtgggcggcggggtgcaagataccaagccggctgtggcggccaatccagatgcgattgac attgacagcggcgatgacgagtaa

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