Cordyceps militaris: CCM_00392
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Entry
CCM_00392 CDS
T03108
Name
(RefSeq) tRNA-splicing endonuclease subunit sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmt03016
]
CCM_00392
Enzymes [BR:
cmt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CCM_00392
Transfer RNA biogenesis [BR:
cmt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CCM_00392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
18162427
NCBI-ProteinID:
XP_006665615
UniProt:
G3J3W3
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MAALQAPFPVRVARIAGRYLVFDTEAAAALRRHVNTNGVLVGTAPQQPTQNIFLGLPVEL
RPEEVETLVRTGAAYVVDGAAAHRDTLPSYRDPARRQAYVESLRRHKEAAQAALAERSAQ
RAAEVANKLKRGKNNKGAAAAAAVAAQSPEQADGAATALPQVKTMGITPTSSTDLVPAGA
YRCVDAPSQDEAAPLCRHLLSNGFHMTPGLRFGAQYSVYPGDPLRFHAHFMASQYGWDEP
IPILDVVAAGRLATAVKKAFLFGGEQPAAEGADHEPQVRTFCLEWAAM
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttgcaggcaccgtttcctgtgcgcgtcgcccgcatcgccggccgctacctg
gtctttgacaccgaggccgctgccgcgctacgccgacatgtcaacaccaacggcgtgctc
gtcggcacggcgccgcagcagccgacgcaaaacatttttctgggcctgcccgtggagctg
cggcccgaggaggtcgagactctagtgcgcacgggcgccgcgtatgtcgtagatggcgcc
gccgcgcaccgggacaccctcccgtcgtaccgggacccggcccgccggcaggcgtacgta
gagtccctccgcaggcacaaggaggccgcgcaggccgcgctcgccgagcgcagcgcgcag
cgcgccgccgaggtcgccaataagctcaagcgaggcaagaacaacaagggcgcggctgcg
gcggcagccgtcgccgcgcagtcgccagaacaggcagacggcgccgccaccgcgctgccg
caagtaaagacgatgggcatcacgcccacctccagtaccgatctcgtaccagccggcgcg
taccgttgcgtcgacgcgccttcgcaggacgaggccgcgccgctgtgcaggcacctcctc
agcaatggcttccacatgacgcccggcctgcgcttcggcgcccaatacagcgtgtacccc
ggcgacccgctgcgcttccacgcgcatttcatggccagccagtacggctgggacgagccc
atccccattctggacgtggttgccgccggccgactcgccacggccgtcaagaaggcgttt
ctgtttggcggcgagcaacccgcggccgagggggccgatcacgagccccaagtcagaacg
ttctgcttggaatgggctgccatgtaa
DBGET
integrated database retrieval system
