Cordyceps militaris: CCM_00431
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Entry
CCM_00431 CDS
T03108
Name
(RefSeq) Transcription Factor IIF, Rap30/Rap74, interaction
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cmt
Cordyceps militaris
Pathway
cmt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCM_00431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_00431
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CCM_00431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
18162466
NCBI-ProteinID:
XP_006665654
UniProt:
G3J402
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MSTPPTQNMNGKPKRKPNPLRPMRPRPRQVPSAAANRPDQKSSSASAAAGPSRSNAANGG
KQSLDELRKQYGGWSEPPPPYKYTDIPIMTTKKALLDGIRYHLMKLSSTKADGGPIDPTD
QEEFARPVTLHRRDARLPPPGRTVKEEAPQRLPVDEQERERLVQIKADKEVQRAINQAKI
APVAKEVVPKKPKKQKEERTVFNRGPRTVAAKKESDLRYEEALPWHLEDVDGKNVWVGSY
VAALSESNVAFVIDQSVFRMIPLEKWYRFTSKPQFQAFTIDQAEEYMNRKIDVGRWVMKD
EEKKSGQEDLQATRRMLYGSGMIKTESDTFKAASRAEKMEHDEIDMSGDEFQDDDEAPMF
ERNDDDDTKDSKDRIRREQLGANLFGDGDEGQVDQELQQQLKEELERQKFGKATRKALIK
RDREDIYESDKSEDNPWSSSVRIPHQLLSYYQYTDVMQSDEESSDEENEEKKEDEKKDGE
KKDEKDKDDKDEKNKIKAASAQGKHKPADKKSKSLKRAGSPALSESSGNESSRKKMKKTA
VTAPGSRAGTPIPGAVRKKKLGAGSTSDGEATAGEMSDGAGPRKKIKLVASAKGTPSASR
AGSPVPAGASPPPSSAGIEPWEILEKIPDGGISIVELIKPFQSRVGTKPGQMAKGDWIKL
VTRLCEYGPEKLLRKRK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagtactcctccgacccagaacatgaacggcaaacccaagaggaagccgaatcctctg
cgcccaatgcgcccgaggcctcgtcaggtcccttctgcggctgccaaccgaccagaccag
aagtcctcatcagcctcagcggctgctgggccatcgcgatcgaacgcggcgaatggaggc
aagcagagcctcgatgaactgcgcaaacaatatggtggttggtcagagccgccgccaccg
tataaatataccgacatcccaattatgacaacgaagaaggcactgcttgatggcattcgc
tatcatctcatgaagctatcttcaaccaaagccgacgggggacctatcgatccgaccgac
caggaagagtttgccagacccgttactctgcatcggcgagatgctcgcttgccacccccc
ggcagaacagtcaaggaggaagctccccagcgcctccccgtggatgagcaagaacgagag
agactagtacagatcaaggcagacaaggaggtgcagcgcgccatcaaccaagccaagatt
gcgcctgtcgccaaagaagtcgtgcccaaaaagccaaagaagcaaaaggaagagcggaca
gtgttcaacagagggccccgtaccgttgcagccaaaaaagaatccgatttgcgttatgaa
gaagccttgccatggcatctcgaggacgtggacggcaaaaacgtctgggttggttcgtac
gttgctgctctctcagaatccaacgttgcatttgtcatcgatcagtccgtcttccgcatg
atacctctggagaagtggtatcgcttcacatcaaagccgcaattccaagcttttaccatt
gaccaggctgaagagtacatgaacagaaagattgacgttggtcgctgggtaatgaaggat
gaagagaagaagtctggtcaagaggatttgcaagctacgcgacgaatgctatatgggtcg
ggtatgatcaagactgagagcgatacctttaaagcggcatcccgtgcagaaaagatggag
catgatgagatcgacatgtctggagacgagttccaggatgacgatgaagcgcccatgttt
gaacgcaatgatgacgacgatacgaaagattccaaggacagaatccgccgcgaacagctc
ggtgccaacctgtttggcgatggtgatgaaggccaggtcgaccaagagctccagcagcag
ctgaaagaggaacttgaacgccaaaaatttggcaaagccactcgtaaggctctcattaaa
agagatcgcgaagatatctacgagagtgacaaatctgaagacaacccttggagcagctcc
gtgaggataccccaccaattgctatcatattatcaatatactgacgtgatgcagtctgat
gaagagtcttcggacgaagagaatgaagagaagaaggaagatgaaaaaaaagacggtgaa
aagaaggacgagaaggacaaggacgacaaagatgaaaagaataagataaaggccgcaagc
gcacaaggtaaacataagcctgcggacaaaaagagcaagtccctgaagcgtgcagggtct
ccggcgctatccgaatctagtgggaacgaatcgtcgcgcaagaagatgaagaagactgca
gtaacggcacctggtagtcgcgctggaacgccaattcctggtgctgtccgcaagaagaag
ctgggtgctggatctactagtgatggcgaagctacagcgggcgaaatgtcagacggtgct
ggacccagaaagaagatcaaacttgttgcaagcgccaagggaacaccgtccgcatctcgg
gccggcagccctgtcccagccggtgcatcaccgccaccctcatctgcagggatcgaacca
tgggagattctggaaaagattcccgacggcggcatcagcattgtggagcttatcaagccc
tttcagtcgcgcgtcggcaccaagcccggccagatggccaagggtgactggatcaagctc
gtcactcgactgtgcgaatacggacccgaaaagctactgcgcaagcgcaaatag
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