Cordyceps militaris: CCM_00861
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Entry
CCM_00861 CDS
T03108
Name
(RefSeq) DNA replication factor C subunit Rfc1, putative
KO
K10754
replication factor C subunit 1
Organism
cmt
Cordyceps militaris
Pathway
cmt03030
DNA replication
cmt03410
Base excision repair
cmt03420
Nucleotide excision repair
cmt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCM_00861
03410 Base excision repair
CCM_00861
03420 Nucleotide excision repair
CCM_00861
03430 Mismatch repair
CCM_00861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmt03032
]
CCM_00861
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_00861
DNA replication proteins [BR:
cmt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CCM_00861
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CCM_00861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_18
AAA_14
AAA_16
AAA_33
AAA_30
RuvB_N
NTPase_1
AAA_28
BRCT_2
Motif
Other DBs
NCBI-GeneID:
18162895
NCBI-ProteinID:
XP_006666083
UniProt:
G3J6H2
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MPDIRSFFTPKGGAVAAPVKAEPPSQKPDSKRRKVVRNVVEDSDDDEIVETKPAVKPTPK
PKKKKAEDDGVEISTSDYFTSNKAPKSKQATPKKSAAAATKSDAPVRSSPRSKVNGAKTT
APATTQANEKQAPKRTARPSYRGTRDDDDDAYMEDADEDGNDIFAAAIKGNGKGDDDYKE
DSDEDMPVKASRVVSKGKPAPETKSPRAAPASKKRKTPEPDSDEEEEEVLPRKKPAASKP
RAPRAKKADASEDASIQKILDSVATVRPPTPPPTDPNAKFDWRKAAGGGNATVQPVGSAD
IPDGEEECLSGLSFVFTGVLQTIAREEGQALVKRYGGKVTGQPSSKTSFVVLGDDAGPSK
LAKIKSFGIRTIDENGLFDLIRKLPAHGGTGKGAQKAQEKKKADEEKIKQQIAEMEAEEK
AKKVAEAKAAKAAASVPGAARPPRPSATPTQLLTSKYAPTQLNHICGNKGQVEKIQAWLR
NWPKAKKYNFQKRGADGLGGERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDARSK
KLVETGVSDVMNNTSLLGFFAGDGKNVDTTKKKIVLIMDEVDGMSGGDRGGVGAMAKFCK
KTEVPLILICNERRLPKMKPFDHVAFDVRFNRPTVEQVRSRIMTICHREGLKLPPPVVDA
LIEGSNKDIRQIINMISTAKLDQTSMDFNQGKAMTKAWEKHVVLKPWDICQKMLGGGLFA
PASKATLNDKIELYFNDHDFSFLMIQENYLRTKPMALNGKGYNKREERLKTLELFDQAAE
SISDGDLVDRMIHGPQQHWSLMPTHAIFSTVRPASFIAGQLMGSSFTSYLGNLSKTGKLG
RYIREIHSHMRLKSSGDHNEIRQQYLPVLWKQLIDKLQDEGSEAVPEVIDLMDAYYLTRE
DFDAILELGVGPMDESTVKIETKAKAAFTRTYNAMSHPVPFMKASTNVVAPKKSAQDVPD
LEEAIEEEDDVELAEAPAEDDDAIDFKKDKYIKQPKAKKATKKSKAKADDEEDEKPKAKP
KAKAKAKK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcgctctttctttacacccaaaggcggcgcggtcgcggcccccgtgaaa
gctgagccacccagccagaaacccgacagcaagcggagaaaagttgttcgcaatgttgtt
gaagacagtgatgatgacgagatcgtcgaaacgaagcctgctgtgaagcctacaccgaag
cccaagaagaaaaaagccgaagatgacggcgttgaaatttcgacaagcgactacttcaca
tccaacaaggcaccaaagtcgaagcaggctacacccaagaaatctgccgctgctgcaacc
aaatccgatgccccagtcagaagcagtccacgatcaaaagtgaatggggcaaaaacgaca
gcaccagcaacaacacaagccaatgagaaacaagcgccgaagcgaacagccagaccttct
taccggggaacacgagacgatgacgacgatgcatacatggaagatgccgatgaggatggc
aatgacatattcgccgccgccatcaagggcaacggcaagggagatgacgactacaaagag
gactctgatgaagacatgcctgttaaggcgtcacgggtggtatcgaaagggaaacctgcc
cctgagacgaagtccccccgcgctgctccagcgagcaagaagcggaagaccccagagcca
gactctgatgaggaagaagaagaagtgcttccgcgaaagaagccagcggcttcgaagccc
cgtgcacctcgggccaagaaggctgatgcgtccgaagacgcttccatccaaaaaatcctc
gacagtgtcgccacagttcggccaccaaccccaccaccgacggatccaaatgccaagttc
gactggcgaaaagctgcaggcggtgggaatgccaccgttcaaccggtaggcagcgccgat
attcccgatggtgaagaggaatgtttgagcggtctttcctttgtcttcactggcgtcctg
caaacaattgcccgtgaggagggacaggcactcgtgaagcggtatggtggaaaagtgact
ggccaacccagcagcaaaactagcttcgtcgttttgggcgacgatgctggtcccagcaaa
ctggccaagatcaaatcttttggtatcagaactattgatgagaatggcttgttcgatttg
attcgcaagcttcctgcccatggaggaactggcaaaggagctcagaaagcgcaagaaaag
aaaaaggccgacgaagaaaagatcaaacagcagattgccgaaatggaggccgaggagaaa
gccaagaaagtcgctgaggcgaaggctgcaaaggcagcagccagtgtgccgggtgcagct
cgtccaccgcgcccttctgctaccccgactcagcttctcacctcaaaatatgcccctacc
caactcaatcacatatgcggcaacaagggtcaagtggaaaagatccaagcctggctaaga
aattggccaaaggccaaaaagtacaatttccagaagcgtggcgccgatggactggggggc
gagcgagcgatcattatttcgggaccacctggcattggcaaaacgacagccgcccacctg
gctgccaagcttgaaggatatgacgtcctggaaagcaatgccagtgatgctcgtagcaag
aagctggtcgaaactggcgttagcgatgttatgaataacacgtcactactaggcttcttc
gcaggtgacggtaaaaacgtcgacacgacaaaaaagaagattgtcctcatcatggacgag
gtggatggcatgtctggtggcgacaggggaggtgttggcgccatggccaagttttgcaag
aagacagaagttccgttgattcttatttgcaacgagcgacgtctaccaaaaatgaagcct
tttgaccatgtcgcattcgacgtgcgattcaaccggccaactgtagagcaagtgcggtca
cgcatcatgacaatctgccatcgcgaaggcttaaaactgccgccccccgttgtcgatgcc
ctgattgaaggcagcaataaggatattagacaaatcatcaacatgatttcgaccgcaaag
ctggatcagacgagcatggatttcaatcaaggcaaagccatgaccaaggcctgggaaaag
cacgtcgttctaaaaccgtgggacatctgccaaaagatgctgggcggcgggctttttgcc
ccggctagcaaggcgacgctgaatgataagatcgagctatacttcaacgatcacgacttc
agctttctgatgatacaggaaaactacctccgcaccaagccaatggcactcaatggcaag
ggctacaacaaacgagaagaaaggctcaagacgctagagctgttcgaccaggctgcggaa
agtatcagcgacggcgacttggtggacagaatgatacatggcccccaacaacattggagc
ctcatgccaacgcacgccatatttagcacagtccgtcctgcgagctttatcgcaggccaa
ctcatgggttctagcttcacctcgtatctcgggaacctcagcaagactggcaaactcgga
cgatatatccgcgagatccactctcatatgcgcctgaagagttctggtgaccacaatgaa
atccgtcaacaatatttgcccgttctctggaaacagctcattgacaagcttcaagatgag
ggctcggaggcggtgccggaggttatcgacctgatggacgcatactacttgacgcgtgaa
gactttgacgctattctggaacttggtgttgggccaatggatgaaagtaccgtcaaaatt
gaaaccaaggcgaaggcggccttcacacggacatataacgctatgagccatccagtccca
ttcatgaaggctagcacaaatgttgtcgctccgaagaaatcggctcaggacgtgccagat
ctagaggaagcaatagaggaggaagacgacgtggaattagcagaagcccctgccgaagat
gacgacgcgatcgatttcaagaaagacaagtatatcaagcagcccaaggcaaagaaggcc
accaagaaatcaaaagcaaaggcggatgacgaagaggacgaaaagcccaaggcgaagccc
aaggcaaaggccaaagctaagaaatag
DBGET
integrated database retrieval system
