Cordyceps militaris: CCM_00946
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Entry
CCM_00946 CDS
T03108
Name
(RefSeq) Nucleotide-binding, alpha-beta plait
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
cmt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CCM_00946
03015 mRNA surveillance pathway
CCM_00946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_00946
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CCM_00946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
18162979
NCBI-ProteinID:
XP_006666167
UniProt:
G3J7C0
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MPSTSPARERFRSRSRSPAPNNQHNTRSRSPSRSRSRSPVPPRNGGGGGGGGRHRDDSRE
RSRSHSRSRSRSYSRSRSRSRSYSRGRSYSRSPSRRSDSRSRRGSEGPLAKSTKIVVERL
TKTINEDHLYEIFGKFGRIKDLDLPVNRTYNTNRGTAYILYDHETDAEAAIANMHEAQVD
GATINVSIVLPRRKLSPPPPTARRGANIDPRVPYTGGGGRGGGGGRRRGGGPPMSPLGGG
GGGGGRYGPRSDVYRPGGGSSRSQSPPPARGGGGGGGRYRNRSPASYSSRSPPPRRGSGG
GGHGRRSRSIDARDDRSRGGY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaacgtcgccggcgcgagagcgcttccgctcgcggtcgcgctcacccgccccg
aacaatcagcacaacacgcggtcgcgctctccctcccgatcgcgcagcagatcgcccgtg
ccgccacgcaacggcggcggcggcggcggcggaggccgacatcgagatgacagccgtgaa
cgcagccgaagccatagccgaagcagaagtcgtagctacagccgcagccgcagccgcagc
cgcagctacagtcgcgggcgcagctatagcaggagcccgagccgccgcagcgacagccgc
agtcggagaggcagcgaggggccactggcgaagagcacaaagattgtcgtggagcgtttg
accaagaccattaacgaggaccatctgtacgaaatctttggcaagttcggtcgcatcaag
gacctcgaccttccggtcaaccggacctacaacacaaacagaggcaccgcatatattctg
tatgaccacgaaaccgacgccgaagccgccattgccaacatgcacgaggctcaagtcgac
ggagccaccatcaacgtctccattgtccttccccggcgcaagctctccccaccgccgccg
accgcccgacgcggcgccaacattgacccccgcgtgccctacacaggcggcggggggcga
ggcggcggcggcggacgacgtcgcggaggcggcccgcccatgtctccattaggaggagga
ggaggaggcggtggccggtacggacctcgctcggatgtatatcgccctggaggcggctca
tcgcgctcccaatccccgccgcctgcgcggggcggtggcggtggcggcggcagatacagg
aaccgttcaccagcgtcgtattcgtcccggtcgccgccgccccgaagaggcagtggcggc
ggcggccatggccgtcggagtcgcagcatagacgcccgtgatgaccgcagccgaggcgga
tattga
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