Cordyceps militaris: CCM_01108
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Entry
CCM_01108 CDS
T03108
Name
(RefSeq) pre-mRNA splicing factor
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cmt
Cordyceps militaris
Pathway
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_01108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_01108
Spliceosome [BR:
cmt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CCM_01108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
RRN3
Motif
Other DBs
NCBI-GeneID:
18163141
NCBI-ProteinID:
XP_006666329
UniProt:
G3J371
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSTVADELLNDFGSSGDEAEELENGLETTNGDAMEVDGGEAHVKAEDDSDDEAASKAKIE
KMQLGTVKDVRSVASLMATLDPILEKIKHYQSQPATQANVGNIEDHPEYNLLTQSNSLST
QIDGEVNLVHKFIRDHYSTRFPELERLITTPLQYAKVVSIIGNCPMDTESIKALQMSTDN
PLGVGLKAVLDGPSLMIVTIEATTSKGENLAPEELARVFQACDLMIELHAAKTSLTEYVQ
SRMNIFAPNLTALIGSLTAAQLLNAAGGLTGLSKTPACNLPSWGSKKRQAGLATNIGVRQ
QGFLYNSEIIRGIPNDLKKQAMRIVAAKLILAARVDRIHSSADGSTGDNLKSQCLERLEK
LTEPPPNKGGRALPVPDDKPSRKRGGRRARKAKEALAMTEMRQAQNRMAFGKEELEVGFG
TGSGTVGLGMIGQANDGRIRGMQVDQRTRAKLSAKNKGWGAASSVGGGAASSIGGFGHSS
GMDLRGKGLRTSGVGSTIGGGPGAGTASSLAFTPVQGLELVAPKMQAELSKKRKAEEDRW
FQGGTFTQLNGTGGAGSSNGFKIPALPASKRQNTGGGSMGPPPKK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagtcgcggacgaattactcaacgactttggcagctcaggcgacgaggctgag
gagctggaaaatggcctcgaaacaacaaacggcgacgccatggaggtagatggtggcgag
gcccacgtcaaggcagaggacgactcggatgatgaagcagcgtccaaggccaaaatcgaa
aagatgcagctgggtactgtcaaggatgtccgcagcgtagccagtctgatggctactttg
gatccaatcctagagaaaattaaacattaccaatcgcaacccgccacacaagcgaatgtc
ggaaacatcgaagatcatcctgagtacaacctgttaacgcagtcaaacagcctatctacg
cagattgacggcgaggtcaacctggtgcacaagtttatccgcgaccactactcgacgcgc
ttccccgaactcgagcgactcattacaacgccactgcaatacgccaaggttgtttcaatc
atcggcaactgccctatggatacagaaagtatcaaagcgctgcagatgtcgacggataac
ccgctcggcgtgggtctcaaagccgtgttggatggaccgtcacttatgattgtcactatc
gaggctacaacatccaagggggagaacctggcgccagaagagcttgcgcgagtattccag
gcgtgcgacctgatgatcgagcttcatgcggccaaaacgagcttgacggaatacgtacag
tctcgcatgaatatttttgcgccgaacctgactgcactcatcgggtcgcttactgcggcg
caactcctcaacgctgctggcgggttgacgggcctatcaaagacgccggcctgcaaccta
ccgtcatgggggtccaaaaagcgccaggctggtctggcgaccaatattggtgtgcgacaa
caagggttcctctacaactcggagattattcgcggcatccccaacgatctgaaaaagcaa
gccatgcgcattgtcgcggcgaagctcatcctagctgcgcgcgtggaccgcatccactcg
agcgctgacggatctacaggtgacaacctcaagtcgcaatgtctagagcgcctggagaag
cttacagaaccaccgcccaacaagggcgggcgcgctctacccgtccccgacgacaagccc
tcgcggaaacgcggtggacgccgggcgcgcaaagccaaggaggcgctcgccatgacggag
atgcgacaggcgcaaaaccgcatggcgtttggcaaggaggagcttgaggtgggcttcggc
acgggctcaggcaccgtcgggctcgggatgattgggcaggccaacgacgggcgcatccgc
ggaatgcaggtcgaccagcggacgcgggccaagctgagcgccaagaacaagggctggggc
gcggcgagtagcgtcgggggcggcgcggcgtcgtccatcggcggcttcgggcattccagc
ggcatggatctgcgcggcaagggcttgcggacgtcgggcgtgggcagcaccattggcggc
ggtcccggcgcgggcacggcgtcatcgctggcgtttacgcccgtgcagggtctcgagctg
gtggcacccaagatgcaggcggagctgagcaaaaagcgcaaggcggaagaggaccgctgg
ttccagggcggcacgtttacgcagcttaacggcactggcggcgcgggatcgtccaacggg
ttcaagattccggcgctaccggcgtccaagaggcagaataccggtggcgggagcatggga
ccgccaccaaagaagtga
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