Cordyceps militaris: CCM_01300
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Entry
CCM_01300 CDS
T03108
Name
(RefSeq) CFIA complex component Rna14, putative
KO
K14408
cleavage stimulation factor subunit 3
Organism
cmt
Cordyceps militaris
Pathway
cmt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CCM_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_01300
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CCM_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
UTP6_C
HrpJ
Motif
Other DBs
NCBI-GeneID:
18163331
NCBI-ProteinID:
XP_006666519
UniProt:
G3J4C5
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MADEESWDSGDVAAPKGDQIERDGSHTENPVEAAYDPGHVHDDCSDDGADYDPESVGMGT
VDAPAELAPPSAFRATSRPKMAGGFIVEASDDDEESIPARIVPRGNSVPEKDSTSAPGQL
GFASLPQGMVGLDPITLFEARIKEDPRGDMDAWLNLMTEYRSRNRLEELRKVYHQFLEVF
PQASDIWVQWVELELGLDNFVDAEQLFGRCLMTVPNIKLWTVYLNYIRRRNDLNNDPSGQ
ARRTVTQSYEFVIDNIGVDRDSGDVWLDYVQFIKNGPGLIGGTGWQDQQKMDQLRKVYHR
AINIPMSTVNSLWKEYDQFEMGLNKVTGRKFIQERSPGYMSAKSGNIALDNITKQLHRVS
LPRLPPAPGFDGDTEYKAQVELWTKWIAWEKDDPLVLKEDDPKAYTQRVIYCYKQALMAL
RFWPEMWVDAAEWCFQNDIRENESESGTLFLEQGIAANPQSVLLALKLADRIEATYAGKE
GDKFAYAEATRKPYDAILDTLYSMGDKVKEREKLEVSTLKQAAAQDPEMQQSIEREEDHN
GKPRLSAGEERIKAIQKAYAAESQLLSRTISYIWIALARAMRRIQGKGTQTEGGLRKVFT
DARHRGRLTSDVYVAVALLESVVYKDPVGAKIFERGARLFPNDEEFMIEYLKFLHSKDDT
TNARVVFETCVNRLISKPETLAKARPLYAYFHKYESQYGELSQISKLEERMAELFPDDPR
LKSFTERYSSDKFDPVHTPIIVSKAVQMRPKRTMPVIEQPVPSHDSPGPLRQEQSPRPQF
SRATASPKRPFGMEEDELNPPKRVARGASPLKGAAGRRLDQQRRNQTSALQRDITFLLGI
LPPAHAYDSQRLTAPNMVSLLRDTPLPDYMSWKAATGGQYRQHTQMHTRQTSSDFARPIS
PYGQVPGSSSGYRNSPLAGGYQAPGSNWGNYATGQFGSQRY
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaagaatcatgggatagtggtgatgtagcagcacccaagggggatcaaatt
gagcgcgacgggtcgcacactgaaaaccctgtcgaagctgcgtacgacccaggtcatgtt
cacgatgattgcagtgacgatggagcagactatgatcctgaatccgtcggcatgggcact
gtcgacgcgcctgccgagctcgcccccccctcagcttttcgggccacgtcgagacccaaa
atggctggcgggttcattgtcgaggcatccgatgatgatgaagaatcgatacctgcgcga
attgtaccgcgcggcaacagcgttcctgaaaaggacagcacatcggcgcctggccaattg
ggctttgcatccctgccccaaggtatggtcggccttgatccgatcactctgtttgaagct
cgaatcaaggaggatccacgaggagatatggatgcctggctgaatctgatgactgaatat
cggagccgcaacaggcttgaggaattgcgcaaagtctaccaccaatttctggaagttttc
cctcaggcaagcgacatctgggttcaatgggtagagttggaactcggactagataatttc
gttgacgctgagcagctctttggtcgctgcttgatgacagtgcccaatatcaaactttgg
accgtctacctcaactacatcagacgtcgcaacgatctaaacaacgatccttccggccaa
gcgagacgaacggttactcaatcgtatgagtttgttatcgacaatattggagttgataga
gactctggcgatgtgtggctggactacgttcagttcatcaaaaatggccccggcctgatt
gggggtactggttggcaggaccagcaaaagatggaccagctgcgcaaggtctatcatcgt
gccatcaacatacccatgtccactgtgaactcattgtggaaagagtacgaccagttcgaa
atgggtctcaacaaggttactggccgcaaatttatccaagaacgctcgcccggctacatg
tctgccaaaagtggcaacatcgccctcgacaatattacgaagcagctgcacagagtcagc
ctaccccgtcttccaccagctcctggatttgatggcgacaccgaatacaaggctcaggtt
gaactatggacgaagtggattgcttgggagaaggatgaccccctggttctgaaagaggac
gaccccaaggcatacacacagagagtcatttactgctacaaacaagctctgatggcccta
cgcttctggccggagatgtgggttgatgcagcggaatggtgtttccaaaacgatatccga
gaaaacgagagtgaaagtggcacactctttctcgagcaaggtatcgccgcaaacccacag
agcgtcttgctagcgctcaaactcgccgatcgcattgaggcaacatacgccgggaaggaa
ggcgacaagtttgcatatgctgaggcaactcggaagccttacgatgccatcctcgatact
ctctatagcatgggtgacaaggtcaaggagcgtgagaagcttgaagtctcaacactcaaa
caggctgccgcacaagacccagaaatgcagcagtccatcgaacgagaagaggaccacaat
ggcaagccaaggttgtccgcaggggaggagcgtatcaaagctattcagaaagcgtacgcg
gccgagagccagctcttgtcccgaacaatttcctacatctggattgctcttgcacgcgca
atgagaagaatccaaggcaaaggtactcagactgaaggtggccttcgcaaggttttcacc
gatgctcgacacaggggccgcctcaccagtgacgtatatgttgctgttgcgcttcttgag
tcagtcgtatacaaggatcctgtcggcgccaagatcttcgagcgaggcgcgcgtctgttc
ccgaatgatgaggaattcatgattgagtacctaaaatttctccattccaaggacgatacc
accaatgcccgcgttgttttcgaaacgtgcgttaatcgcctaatttcgaaacccgaaact
ctagcaaaggctcgtccgttatacgcttacttccacaaatacgaatcccaatacggcgaa
ctctcccagatctcgaaactggaggaacgcatggcagagcttttccccgatgatccgagg
ttgaagtcttttacagagcgatactcttcggacaaatttgacccagttcatacaccaatt
attgtgtcgaaagctgtgcagatgcgtcctaagagaaccatgcccgtcatcgaacagccg
gttcctagtcatgatagtcccggccccttgcgacaggagcaaagcccacggccacaattt
tctcgtgcaaccgcctcccccaagcgaccattcggaatggaggaagatgaactcaatccg
ccgaagcgtgtcgctcgtggtgcttcgccactcaaaggagctgcgggccgccgccttgat
caacagcgacgtaaccaaacatcggcgctacaacgcgacattactttcctcctgggcatt
ctgcctcccgcccacgcatacgattcgcaacgtctcactgcacccaacatggtatctctc
ctgcgtgataccccgctacctgattatatgtcttggaaagcagctacaggagggcagtac
agacagcacacccagatgcatacgagacaaacatccagcgattttgcgcgtccaatcagc
ccctacggccaagtcccgggttcctcctctggatatcgtaactctcctcttgccggcggc
taccaagcgccaggctcaaactggggaaactatgctactggtcaatttggcagccagcgc
tactag
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