Cordyceps militaris: CCM_01605
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Entry
CCM_01605 CDS
T03108
Name
(RefSeq) pre-mRNA processing splicing factor, putative
KO
K12856
pre-mRNA-processing factor 8
Organism
cmt
Cordyceps militaris
Pathway
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_01605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_01605
Spliceosome [BR:
cmt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CCM_01605
Complex C
U5 SnRNP specific factors
CCM_01605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
18163635
NCBI-ProteinID:
XP_006666823
UniProt:
G3J5Z4
LinkDB
All DBs
Position
Unknown
AA seq
2492 aa
AA seq
DB search
MSHPPPPPPGWGPPPPSTTPIIGFQQSDPHMAKFAQKKQEWLRHQRNRFGEKRKGGFVET
QKADMPPEHLRKIVRDIGDVSQRRYTNDKRSYLGALKFMPHAVLKLLENMPMPWESAREV
KVLYHVNGCLTLVNEIPRVVEPVFFAQWAMMWTFMRKEKADRRLFKRMRFPPFDDEEPPL
SWSENIEDVEPLEPIQMELNEEEDEAIYEWFYDHRPLLDTPHVNGPSYKSWNMTLPQMAA
LFRLSRPLISDVIDKNYFYLFDLKSLLTAKALNVALPGGPRFEPLYKDINPNEEDFGEFN
AIDRIIFRNPIRTEFRVAYPFLYNSLPRSVHMSWHSQPQAVFNRADDPDLPTFHFDRRIN
PISSRTVAPKNADISLEDELFGPGNNEEDEEDGFTLPAGVEPFLADEELDNEHTSSAIEL
WWAPFPFDRRSGRMVRAQDVPLIKQWYLEHPPSDRPPVKVRVSYQKLLKNYVLNELHKKK
PKAHNNQNLFRSLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYNFN
LKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGIHYAFN
HVGQLTGMYRYKYKLMHQIRTCKDLKHLIYYRFNSGPVGKGPGCGFWAPSWRVWLFFMRG
IIPLLQRWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMSDLMDMMPEGIKQ
SKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWISVTHYNRERIRR
GATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAVAIYTTTVHWLESRKFS
PIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAYDSPGTTLERIKR
FLLTQRAFKEVNIDMNDNYNTINPVYDIEPIEKISDAYLDQYLWYQADQRHLFPAWIKPS
DSEVPPLLVYKWAQGINNLSGVWETENGECNVMIETELSKVYEKMELTMLNSLLRLIMDH
NLADYITSKNNVQLTYKDMNHVNSYGLIRGLQFSAFVFQYYGLLLDLLLLGPQRASEIAG
PPQSPNDFLQFRDKETETRHPIRLYSRYIDKIWVFLRFTAEESRDLIQRFLTEQPDPNFE
NVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRTVTTIDWDDSFASVYSRDNP
NLLFSMSGFEVRILPKIRNQNDEFPVKDGVWSLVDNTTKERTAHAFLQVTEDDIAKFNNR
IRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVELLDTIVKCETKIQTRVKIGL
NSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWYKQTDTGTTHFRAGMTHDEET
LIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTLEDLEDSWDRGLPRINTLF
QKDRSTLSFDKGFRARAEFKVYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGGVET
ILEHTLFKATGFASWEGLFWEKVAVEDVKEGDLLLGPDGGSRRAFNVVNGKDRLYRIKID
NQKEDLVVTTNHILVFHKETATATYDAHEMTAAEYAALESAERAKYLLFSTPRTTTTEGA
IPKTDRFVVNDIVLEAEATEWAGFRVDGDQLYLRHDYLVLHNSGFEESMKFKKLTNAQRS
GLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQK
IHESVVMDMCQVFDQELEALGIETVQKETIHPRKSYKMNSSCADILLFASHKWNVTRPSH
LNDTKDVIEPTTTNKFWIDIQLRYGDYDSHDIDRYTRAKYLDYTTDSASIYPSATGLMIG
IDLAYNMYSAYGMFFPGLKVLVQQAMAKVMKANPALYVLRERIRKGLQLYASESNQEFLN
SQNYSELFSQKTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT
SVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVQLVDFPNISI
RASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSFTAFSRLVLILRALH
VNPDKTKLILRPDKTIITLEHHIWPSLTDEEWIKVETQLRDLILNDYGKKNNVNVSSLTS
SEVRDIILGMEISAPSMQRQQAAEIEKQQQEQAQLTAVTTKTQNIHGEDLIVTTTSQFEQ
QTFASKTEWRTRAIATSNLRTRAKNVYVSPIDNDLDDVTYVMPNNILKKFITIADLRVQV
AGFLYGASAPDNDQVKEIKCIVMMPQVGGLRNVQLPQQLPQSDFLEGMEPLGVIHTASGG
ELPYMTAADVTEHSKLLDAHSEWDKTNTVTVSVAFTPGSVSLSAWGLTPQGYQWGVDNRD
LQSDQPQGFATTMGEKRKLLLSPRFRGFFLVPDDGRWNYSFMGSAFAGMEKKSVHVKLDT
PLPFYGDQHRPVHFHSFAELEDIGVDRSDNFA
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatccacctccaccaccaccaggctgggggcctccccccccctccaccaccccc
atcatcggcttccagcagagcgaccctcacatggccaagtttgcacagaagaagcaggaa
tggcttcggcatcagcgaaatcggttcggagagaagcgcaagggtggcttcgttgagacg
caaaaggcagacatgccgccggagcatctgcgcaagatcgtgcgcgacattggcgatgtg
tcgcaacgacgatacaccaacgacaagcgcagttatcttggcgcactgaagttcatgccc
cacgctgtcctgaagcttctcgagaatatgccaatgccctgggaatctgcacgcgaagtc
aaggttttatatcacgtcaatggctgcctgaccctcgtcaatgagatccctcgcgttgtc
gagcctgtcttcttcgcgcagtgggcgatgatgtggacctttatgcgcaaggagaaggcg
gatcgaagactattcaaacgtatgcgttttccgccttttgacgatgaagaaccaccgcta
tcatggtccgaaaatatcgaagacgtcgagcctctcgagccaatccagatggagctcaat
gaggaagaagacgaagccatctatgaatggttctacgaccaccgtccgctacttgataca
ccacacgtcaacgggcccagctacaagtcatggaatatgacattgcctcaaatggctgcc
ctcttccgactcagtagacccctgatctccgacgtcatcgacaagaactacttctacctc
ttcgatctcaagagtcttctgactgccaaggctctcaatgtggctctgccaggcggaccg
cgatttgagcctctgtataaagacattaaccccaatgaggaggattttggcgagttcaac
gcgattgaccgtattattttccgaaaccccatccgaaccgaattccgagtcgcataccct
ttcctatacaattctcttccacgaagtgtacacatgtcttggcactcgcaaccccaagct
gtcttcaaccgtgcggatgaccctgacctgccgaccttccacttcgaccgccgcatcaac
ccgatttcgtcccgtactgttgcacccaagaacgccgatatttctcttgaagacgagctg
ttcgggcccggaaacaacgaagaagacgaggaggatggattcactcttccagctggcgtt
gaaccgttcctcgccgatgaagagctcgacaacgaacacacctcatcagcaattgagctt
tggtgggccccgttccccttcgaccgacgctcaggacgcatggtgagagcacaggatgtg
cctctcatcaagcagtggtacctcgagcacccgccttccgaccgaccgcctgtcaaggtt
cgtgtgtcgtaccagaagttgctcaagaactatgttctcaacgagctgcacaaaaagaag
cccaaggcgcacaacaatcagaatctatttagatcgctcaagcagaccaagttcttccaa
cagaccacgatagactgggtagaggccggtcttcaagtttgccgccaaggttttaacatg
ctgaacctgctgattcaccgcaagaacctcacatacttgcatctggattacaacttcaat
ctcaagcctgttaaaactctcacaaccaaggagcgaaagaagtctcgattcggaaacgct
ttccacttgatgcgagaaattttgagattgaccaagctcattgttgatgcccaggttcaa
tacagacttggcaacattgatgcctttcagcttgctgatggtattcactatgcattcaat
catgttggccagctgactggtatgtaccgatacaaatataagctcatgcatcaaatccgc
acatgcaaggatctgaagcacttaatatactaccgcttcaactcaggacctgtcggaaaa
ggtcctggttgtggtttctgggccccatcgtggcgagtatggcttttcttcatgcgaggc
atcattcctcttcttcagaggtggctcggaaacctattgtcgcgacagttcgaaggtcga
cacagcaagggagttgccaaaacagtcacgaagcagcgagtcgagtcccactttgatctt
gaactgcgtgcctctgttatgtctgacttgatggatatgatgcctgaaggtatcaagcaa
agcaaggtcaacacagtactgcagcacttgtctgaagcttggagatgctggaagagtaac
atcccctggaaggttcccggtcttcctgcgcctatcgagaacatcattctcagatatgtc
aagtcaaaggccgactggtggatttccgtcacgcactacaaccgtgagcgcattcgccga
ggtgcaaccgtcgataagactgtggcgaaaaagaatgttggccgcctgactcgtctctgg
ctaaaggccgaacaagagagacaacataaccatatgaaggacggtccttatgtctcttca
gaggaagcagtagccatttacacaacaaccgttcactggctcgagtcgagaaaattttcc
ccaatcccgttccccagcgtttcttacaagcacgacacgaagattctgatcctcgctctg
gagcgtctcagagaggcgtattccgtcaaaggtcggttgaatcagagccaacgtgaagaa
ctggccttgatcgagcaagcatatgacagccctggtactactttggagcgtatcaagcga
ttccttctcacccagcgcgctttcaaagaagtcaacatcgatatgaacgacaattataat
accatcaacccagtgtacgacattgaacccatcgagaagatcagcgatgcctacctcgac
cagtacctctggtaccaggccgatcaaagacatctgttcccggcctggatcaagccttct
gactctgaggtgccccctctcctggtctacaaatgggcccagggtatcaacaacctgagc
ggcgtgtgggaaacagaaaacggcgaatgtaacgtcatgatcgagacggaactgtccaaa
gtctacgagaagatggaactgacaatgctcaactctcttctgcgtctcatcatggatcac
aacctggctgattacatcacctccaagaacaacgttcagctgacatacaaggacatgaat
cacgtcaacagctacggtctaatccgtggactgcagttctccgcctttgtcttccaatac
tacggccttcttctcgatctgttactgcttggccctcagcgtgcgagtgaaattgctgga
cctcctcagagccccaacgatttccttcagttccgtgacaaagagaccgaaactcgacac
cccattcgtctatacagcagatacatcgataaaatttgggtcttccttcgtttcacagcc
gaagaatctcgagatctgattcagcggttcctaacggagcagcccgatccaaacttcgag
aacgtcattggctacaagagcaagaaatgctggcctcgtgactcgcgtatgcgtttgatg
cgccatgatgtcaatctgggccgcgccgttttctgggatctcaagaacagactgccacgt
actgtcacgaccatcgactgggatgacagcttcgccagtgtctacagcagagacaacccc
aacctgctattctctatgagcggttttgaggttcgcatcctgccaaagattcgaaaccag
aacgatgagttccctgtgaaggacggcgtgtggtcgcttgtcgacaacacgaccaaggag
cgaactgcgcatgctttcttgcaagtcacggaagatgacattgctaaattcaacaaccga
attcgccagattctgatgtcgtctggatctacgacgtttaccaagatcgctaacaagtgg
aacactgctctcattgctctttttacatattaccgagaagccgccgtttccaccgtggag
ttgcttgataccattgtcaagtgtgagaccaagatccagacgcgagtcaagattggtctc
aactccaagatgccctctcgtttccctcctgctgtcttctacactccgaaagaactgggt
ggtctcggtatgatatctggctctcacattcttatccccgctagtgacaaacgctggtac
aagcaaaccgatactggaaccactcacttccgagctggtatgacgcatgacgaggagaca
ctcattcccaacattttccgttacattatcccgtgggaggctgagttcattgattcgcag
cgtgtctggaccgaatactcccagaagcgcctcgaagccaaccagcagaaccgccgtctg
actttggaagatctcgaggatagctgggaccgcggtttacctcgtatcaatacgctcttc
caaaaagatcgtagcacactaagttttgacaagggtttccgtgctcgtgctgagttcaag
gtctaccagctgatgaagagcaaccctttctggtggaccagccagcgtcacgacggaaag
ctgtggaacctcaatgcctaccgaactgatgttatccaggcacttggtggtgttgagacc
attctggagcacactctcttcaaagctacaggtttcgcatcctgggaaggtctcttctgg
gagaaggttgctgttgaagatgtcaaggagggcgatttgcttctcggccctgacggcggg
tccagacgcgcattcaatgtggtcaatggcaaggaccgactgtatcgaatcaaaattgac
aaccagaaagaagaccttgtcgtcaccaccaaccacatcctcgtgtttcacaaggaaacg
gcaaccgccacctatgatgctcatgagatgactgctgctgaatacgccgcgctggagtct
gcagagagagccaagtatcttctgttttccactccgcgcacgacaactacggagggtgcc
atcccaaagacggacagattcgtcgtcaacgacatcgtcctggaagcagaggcgacagaa
tgggccggattccgtgtggatggagaccagctctacctccgccacgactatctcgtgctt
cacaacagtggtttcgaagaatcgatgaagttcaagaaactgaccaatgcccagcgatcc
ggtcttaaccaaattcccaaccgtcgcttcaccctgtggtggtccccaactatcaacaga
gccaatgtctacgttggtttccaggtccagctcgatttgactggtatcttccttcatggc
aagattccaaccctgaagatctctttgattcagattttccgtgcgcatttgtggcaaaag
attcacgaatctgttgtcatggatatgtgtcaagtcttcgaccaggagttggaagctctg
ggcatcgaaactgttcagaaagagactatccatcccagaaagtcgtacaagatgaacagc
tcgtgcgccgatattctgctctttgcaagccacaagtggaatgttactcgcccatcgcat
ctcaatgacacaaaggatgtaattgaaccgaccaccacgaacaagttttggattgatatc
cagcttcgttatggcgattacgattctcacgacattgatcgttacacgagagccaagtat
ctcgattacaccacggacagtgccagtatctacccgtctgccaccggcctcatgattggt
attgacttggcttacaacatgtactcggcgtacggaatgttcttccctggcctgaaggtt
cttgttcaacaggcgatggccaaggttatgaaggctaaccccgccctctacgtcttgcga
gagcgcatccgcaagggtttacagctgtatgcctccgagagcaaccaagaattcctgaac
tctcagaactactccgaactgttcagtcagaaaactcagctgttcatcgatgataccaat
gtctaccgtgtcaccatccacaagacattcgaaggcaacttgactaccaagcctatcaat
ggtgccattttcattttcaaccctcgtaccggccaactgttcttgaagattatccacacc
agcgtctgggcagggcagaagcgtcttggacagctcgccaagtggaagactgctgaagaa
gttgcagctctcatccgatcattgcccgttgaagagcagccgaagcagctgattgtcact
cgaaagggtcttcttgatccactcgaggttcagttggttgactttcccaacatttccatc
cgtgcttctgagctgcagcttcctttccaggcggcgatgaaggtcgagaagctcggcgac
atgatcctacgagccacggaaccgcagatggttctgttcaacctgtacgacgaatggctg
aagagtatctcgtcattcacggcattctcgcgtctcgtccttattctgcgtgctctacat
gtcaaccccgacaagacgaagctcattctccgcccggacaagactattatcacgctggaa
catcacatctggccatcgctgacggacgaagaatggatcaaggttgaaacacaactgcgt
gacctcattctgaatgattacggcaaaaagaacaacgtcaacgtgtccagtctgaccagc
agtgaagtgcgagacattatcctgggtatggaaatctctgcgccttccatgcagagacag
caggctgccgagattgagaagcagcaacaggaacaagctcagctcaccgccgttaccacc
aagacgcaaaatattcacggtgaagatcttattgttacgaccacctcacagttcgagcag
caaacgtttgcttccaagactgaatggcgcacacgtgcgattgccacatcaaacttgcgc
acgcgtgccaagaacgtatacgtctctcctatcgacaacgatcttgacgatgtcacctac
gtgatgccgaacaacattttgaagaagttcatcaccattgccgatctgcgcgtgcaggtt
gctggattcctctacggcgcctccgcaccagacaatgaccaagtcaaggaaatcaagtgc
attgtcatgatgccgcaggtgggcggcctccgcaacgtgcagctaccacagcagctgcct
cagagcgactttctcgagggcatggagccgctcggcgtgatccacaccgcgtctggcggc
gagctgccttacatgacggccgcggacgtgacggagcactcaaagctgcttgacgcgcac
agcgagtgggataagaccaacacggtcaccgtctcggttgccttcacacctggtagcgtg
tcgctgtcggcctggggcctcacgccgcagggctaccaatggggtgtcgacaaccgggac
ctacagagcgaccaaccgcaggggttcgcgaccaccatgggcgagaagcgcaagctgctt
ctgagcccgcgcttccgaggcttcttcctcgtgcccgacgacggccgctggaactacagc
ttcatgggcagcgcctttgctggcatggagaagaagagcgtgcacgtcaagctcgacacg
ccactgccattttacggcgatcagcaccgccccgttcacttccacagctttgctgagctc
gaggacattggtgtcgatcgttcggacaattttgcatga
DBGET
integrated database retrieval system
