Cordyceps militaris: CCM_01656
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Entry
CCM_01656 CDS
T03108
Name
(RefSeq) RNA splicing factor (Pad-1), putative
KO
K13091
RNA-binding protein 23/39
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_01656
Spliceosome [BR:
cmt03041
]
Common components
Common spliceosomal components
General mRNP proteins
CCM_01656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
18163686
NCBI-ProteinID:
XP_006666874
UniProt:
G3J698
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MATLDVEALLDATAKSAEASKARLSAEDTSRNERSDHKDFDRDRDRDRDHDRRRKDRRDA
SPLSKSRRETPDVDTPRSDTGSRRRSRSRDDDRRSRRNRDGDFYRSGRNRSRSRSPRRHH
RRDDRDRDRRDRQFRNRDDGPRDKQDATPVLNEDERDRRTVFVQQLAARLRSRELKAFFE
KVGPVTEAQIVKDRISGRSKGVGYVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNR
QARTTEPGGSHPNHVPFHRLYVGNIHFNVTEQDLQAVFDPFGELEFVQLQKDETNRSRGY
GFVQFRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNASNQQGS
SFSGSGGRGGQNSNFDRAGARDSEKTGGASALDDTDVGGVNFNNYSRDALMRKLARTDES
NKGSDERPVLKPRTETKPLPMNVNTASRCVVLHNMFEPDEEEGDDWVKELEDDVRQEAEE
KYGHVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDASPVVDAVYSSLFS
RTRAF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccactttagatgtggaggccttgcttgatgccactgcgaagagcgcagaagcgtcc
aaagcccggctgtctgctgaagatacttccagaaatgagcgatcggaccacaaagatttt
gaccgggaccgggaccgagaccgagatcacgatcgccgccgcaaagaccgccgcgatgcc
agcccgctgagcaaaagccgacgagaaaccccggatgttgacacaccccggagtgacacg
ggcagccggcgacgtagccgaagccgtgatgacgaccgccgttcacgacgcaaccgagat
ggcgacttttatcgcagtggccgaaatcgctcgcgctcacgctcgccgcgccgtcaccac
cgccgggatgatcgcgatagagatcgccgcgatcgccagtttcgaaaccgcgatgatggc
ccgcgcgacaagcaagacgctacgcctgttttgaatgaagacgaaagagaccgaagaaca
gtgtttgtacagcaacttgcagctcggctgcgaagtcgtgagttgaaagcgttcttcgaa
aaagttggtcctgtcacggaagcacagatcgttaaagatcgcatcagtgggcgatcgaaa
ggcgttggctatgtcgagttcaagaatgaagactcggtggcccccgcccttcaacttact
ggacagaaactactaggtatacctgtaatcgtccaagtaacggaagcagagaagaatcgt
caagcccgcactacagagcctggcggctctcatcccaaccacgttccgttccatcgccta
tatgtcggaaacattcacttcaatgtcaccgagcaagatttacaggccgttttcgaccct
tttggagaactggagtttgttcagcttcaaaaggatgaaaccaaccgcagccgtggctat
ggctttgtgcaattccgcgatgcaggtcaggctcgtgaggctttggagaagatgaatggc
ttcgacttggccggccgtcccattcgagttggcctcggcaacgataagtttacccctgag
agcactgccaacatgttacagagattttcaggccagaacgcctccaatcagcagggctcc
tccttttccggatccggtggtcgcggagggcaaaattccaactttgatcgcgccggcgcg
cgcgatagcgagaagacgggcggcgccagcgccctcgacgacacggatgttggtggcgtg
aattttaataattatagtcgcgatgcgttgatgcgcaagctagccagaaccgacgagtcg
aacaagggctctgacgagcgcccggtgctgaaacctagaaccgagacgaagccactcccc
atgaacgtcaacactgccagccgctgtgttgtccttcataacatgtttgaacccgatgag
gaggaaggcgatgactgggtcaaggagctcgaggacgacgtgcgccaggaagccgaggaa
aagtacggccatgttgtgcacatttccgtggaccccaattccaagggcgacatttacttg
aagttcgacaaggttcagggtggtgagaacgccattcgtggcctcaacggcagatacttt
ggtggacgcatgatcgacgcgtcccctgttgtagacgcagtctacagcagtttgttctcc
cgcaccagagctttctaa
DBGET
integrated database retrieval system
