Cordyceps militaris: CCM_01665
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Entry
CCM_01665 CDS
T03108
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_01665
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CCM_01665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_16
TPR_17
Motif
Other DBs
NCBI-GeneID:
18163695
NCBI-ProteinID:
XP_006666883
UniProt:
G3J6A7
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSSGGRDELLVPKFGSFKSKEAQETPKERDESRRKDSSRHKTKRSHHDDRHERHRRDGSR
ESKRPRGRPPSHERERRTYRKPAEETPISRASGPELYIIDTKGDPLIRRYGSLERSKVPA
YYRHGRGRVLGTRGRLIIYRDGPNDSFGLRMPGEGLPRYRDRDGLRSKRPMAHSRPIALR
RRRVAPAREDEDDEGFLSLKSSKQQKRTEDSSQDEGPSYRSIEGKAKPKDYDSDMDSDSD
NSEVDNVETSKPLLWKSIQLNRRVKENPEDIDSWLELVEHQDELLQASTAEGTAPDNESH
SYSEIKVSMLEKALQNARDAVDRERILVPLMREGAKVWSIKAAAKKWAELGTQADSHALW
RVRLEFAITSITEFDYAGVKTMLTQRLHHALSEGTRAYLEAIEVFLLATRFMHDAGYREL
AVAAWQAILELTYFRPEAQTEHEHVPDSFQEFWESEVPRIGEPGANGWKHYVATGGQDEP
PEPLPDPSMPAAAQSIDAFRAWSQLEVEHADAAKLPARTMDGDTEDDPFRVVTYTDIEPF
LFMMPLPLAPSISSSLWDAFLIFCGLPPASSSDWARTLYKDQLLAPVGSSIPAVSIDAAT
APERHEDESIVRRPPLFYRPYSAFSISPRLLFPGNAWFRYLQLPSSNTLVDDRWLEATLG
QLIFSAGCKDLSEYYLAVSFARDPSSVKKTAKKLLKQSPDNASLYNAYALVEHARGSSDV
AAKVVESALSSPLGQLSKQSSRFRLQHTAAWMALENGDMVCSKRALCGAGTLEKEVSFAD
VLKAGSAFSGTLSKSLSTGDVESAETAGECLVLHSYLTNSEASEPMSLSQGNISAAMQTL
DSISRELAVRGHGITPSCERLVQSGAHLLYLHATRGPHRRGYIRDQARKHLQSFPSNAIL
LSVFEWSDAGLRVVDETRQLLRQRSLSDDCVGRRLFAVQHELLRGNAHTARAAFEQAVRS
DAGRASAMLWVWYIRFTHAHSSSKGAVDVLYRALRHCPWAKTVFLEAFGTLAGDMGADEL
RSAYGMMTAKGLRVHVELNESRGRADEGGR
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcggcggaagagacgagctgttggttccgaaatttgggtcttttaaatcgaaa
gaagcacaagaaacaccgaaggagcgagatgaaagtcggagaaaagattcgagtcgccac
aaaacgaagcgctctcatcacgacgacaggcatgagcgccatcgtcgagacggcagcaga
gagtccaaacgaccaagagggcgccctccgtcccatgagcgcgaacgccgcacatacagg
aaaccagccgaggaaacccccatctcgcgcgcatcaggaccagagttgtacataatcgac
acgaagggcgatccactcatacgacggtatggatcgctggagaggtcaaaggtacctgcc
tactatcgccatggccgtgggcgggtattgggaactcgtggtaggctgattatctatcgc
gatggcccaaatgattcttttggtcttcgtatgcctggagagggcctgcctcggtaccga
gatcgtgacgggctgcgctctaaacggcccatggctcactcacgacctattgcactgcgg
aggcgccgggtagcgccggcaagggaagatgaggacgacgagggattcttgtccctgaaa
agctcaaaacagcagaaacgaacagaggattcctctcaagacgaggggccctcgtatcga
tcgatagagggcaaggctaaacctaaagactacgacagtgacatggactcggattcggat
aactccgaggtggataatgtagagacgagtaaacctctcctgtggaagtcaatacagctg
aatcgccgcgtgaaggagaacccggaagacatagactcctggctggagttggtcgagcac
caagacgaattgctgcaggccagtaccgccgaaggcacggctccggacaacgagtcccac
agttacagtgagatcaaggtgtccatgctcgaaaaggctctccagaatgcgcgggacgcc
gtggaccgcgagcgcatcctcgtgccgctgatgcgcgagggtgccaaggtctggagcatc
aaggcagcggccaagaaatgggcggagctgggtacccaggcagactcccacgctctctgg
cgggtgcgtctcgagtttgccataacgagcatcaccgagtttgactatgctggcgtgaag
acgatgctcacccaacgactacaccatgccctgtcggagggcacgcgagcctatctggaa
gcgatcgaggtttttctgctggcgactagatttatgcacgacgctggctacagagagctg
gcggtggcggcgtggcaggcgatcctggagctgacatatttccggccagaggcccaaacg
gagcacgagcatgtgcccgactcttttcaggagttttgggagagcgaggtgccgcggatt
ggggaaccgggcgctaacggatggaagcactacgtggcgacgggcggacaggatgaaccg
ccagagccgctgcctgatccgtctatgccggcggcggcccagtcgatagatgcgttcagg
gcgtggtcgcagcttgaggtcgagcatgccgatgctgccaagctaccagcgcggaccatg
gatggcgacacagaagacgacccgttccgagtcgtgacatatacagatattgagccgttc
ctcttcatgatgccactccctctcgcgccgagcatcagcagctcgctttgggatgcgttt
ctcatattttgcggcttgccgcctgcgtcatccagcgactgggccagaacactgtacaaa
gaccagctcctcgctcctgtgggaagcagcataccggccgtaagcatcgacgccgccaca
gcaccggagcggcatgaggacgagtccatcgtgcgccgcccgccgctcttctaccggccg
tacagcgctttttccatctcgccaaggctgctgtttccaggcaacgcgtggtttcgatat
ctccagctgccgtcgtcaaacaccttggtcgatgatcgctggctagaggctacactcggg
cagctcatcttttcggccgggtgcaaagacctgtcggaatattacctggctgtttccttt
gcccgggacccctcgtctgtgaagaagacggctaagaagctgctaaagcaaagcccggac
aatgcgtccttgtacaatgcgtatgcgctcgtggagcatgcaagagggagcagcgatgta
gcggccaaagtcgtcgaatcagcactctcgtctccgttggggcagctttcgaagcagagc
agccgctttcggctacagcacacggcggcctggatggcgctggagaatggggacatggtc
tgctctaaacgagcactctgtggtgcaggtactttagagaaagaggtatcgtttgccgac
gtactcaaagctggctccgcattttcggggactttgtccaagtcattgtccacgggtgac
gtcgagtcggcagagacggccggtgaatgccttgttctacacagctacttgaccaacagt
gaggcatccgagcccatgtcgctctcacaaggtaatatatctgcggccatgcagacgctg
gactctataagcagagaactcgcggtacgtggacacggcatcacgccttcctgcgagcgt
cttgtccagtccggcgcacaccttttatatctccacgctacaagagggccacatcgcagg
ggctacattcgagaccaggcgcgcaagcatctgcagagcttcccctccaacgccatcttg
ttgtccgtctttgagtggtccgacgccggcctgcgtgtggtggatgagacgcgacagctg
ctgcggcagcggtccttgtccgacgactgcgtaggccgccggctctttgccgtccagcac
gagctcctccggggcaacgcgcacacggcgcgggcggcgttcgagcaggccgtgcgcagc
gacgccggccgggcgagcgctatgctgtgggtttggtatatccggttcacgcatgcgcac
agcagcagcaagggcgcggtggatgtgctgtaccgcgcactgcgccactgcccctgggcc
aagacggtgtttctggaggcgtttgggacgctcgcgggggatatgggagcggacgagctg
cggtcggcgtacggcatgatgacggcaaagggcttacgggtgcacgttgagctgaatgag
agtcgaggccgggctgacgagggtggaagatag
DBGET
integrated database retrieval system
