Cordyceps militaris: CCM_01676
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Entry
CCM_01676 CDS
T03108
Name
(RefSeq) U1 small nuclear ribonucleoprotein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cmt
Cordyceps militaris
Pathway
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_01676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_01676
Spliceosome [BR:
cmt03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
CCM_01676
Complex B
CCM_01676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
18163706
NCBI-ProteinID:
XP_006666894
UniProt:
G3J6I9
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MTDKLPPNLLALFAPRPPLRWVEPADHAPEKRKTAHVDGLAAFLPDLKAYKENDKSVPTE
SWLEARDRKKLEKKAAVEELSTNAPKYYKPNEDPLIRGDAFKTLIVARLSYEADERDLER
EFGRFGPIERTRIVVDTHAAEKGNKKKKPHRGYAFVVFEREKDMRELWPSSLPSLPDVRN
ETFTALKLACLCNHLVSLPLSNTLDQVLYIAAALDACDGIRIKDRRIKVDVERGRTVKGW
KPRRLGGGLGGRGYTKALPARPGGPGGFGGGFRGGRGGFEGGRGGFEGGRGRGGFRGGFG
GRGGGFRGGDRDFGGSRGDRDFGGPRGDRGDRGDRNGFAPRDAPSGPGGFDRRNGDRDRG
SDRRGGMDDRRGGGDRDRDHRDRNRDRDHHDRGDRPPRDGGRFGDRDGGRRTGSNNEPIR
PREGGGYRERENRDFDRPRDDDNRKRGYDGGGYEDPRKIRRY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaagctgccaccaaatttgctggccctgtttgcgccgcgcccgccgctgcga
tgggttgagccggctgaccatgcccccgagaagcgcaagacggcgcacgttgacggtctg
gctgctttcctgcccgacttgaaggcgtacaaggagaatgacaaaagcgtcccgaccgag
agctggctggaggcacgcgatcgcaagaagctcgagaagaaggcggccgtggaggagctg
tccaccaacgcgccgaaatattacaaaccgaatgaggatcctctgattcgcggcgatgcg
ttcaaaaccctcattgtcgcgcgcttaagctacgaagctgacgagcgagatctggaacgt
gaattcggtcgtttcggacctatcgagcgcactcgcattgttgtcgacacgcacgccgcc
gaaaaaggaaataagaagaagaagccacaccgaggctacgcgtttgtcgtctttgagcgc
gaaaaagacatgagagagctgtggccctcaagcttgccctctctacctgatgtgcgcaac
gagactttcacggccctcaagcttgcctgtctctgcaaccatcttgtttctctccctcta
tcgaacacacttgaccaagttttatacatcgctgccgctctggatgcttgtgatggtatc
cgcatcaaagatcgacggatcaaggtagatgttgagcgtggccgaacagtcaagggctgg
aagccaaggcgacttggaggcggcctcggtggccggggctatacgaaagctctgcctgct
cgcccaggcggccctggcggttttggcggtggcttccgtggtggccgaggaggcttcgag
ggcggccgcggaggcttcgaaggtggccgcggccgtggtggcttccgtggtggctttggt
ggccgcggaggaggcttccgaggtggtgatcgtgactttggaggttctcgtggtgatcgc
gactttggtggtcctcgcggcgatcgcggcgaccgtggtgaccgaaacgggttcgccccc
agagacgcgccatccggccctggtggctttgacagacgaaacggtgaccgcgaccgtgga
tctgaccgccgtggcggcatggacgacaggcgtggtggaggagacagggatcgcgaccac
cgcgaccgcaatcgtgaccgtgaccatcacgacagaggcgacagaccaccccgtgacggc
ggtcgattcggcgatcgcgatggtggccgtcgtaccggcagcaacaacgaaccaattcgt
ccccgcgagggtggtgggtatcgcgaacgggagaacagagactttgaccgccctcgggat
gatgacaacaggaagcgaggatacgacggcggcggctacgaggaccctaggaaaattcgc
agatactaa
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