Cordyceps militaris: CCM_01837
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Entry
CCM_01837 CDS
T03108
Name
(RefSeq) Ku family DNA helicase, putative
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cmt
Cordyceps militaris
Pathway
cmt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CCM_01837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_01837
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
CCM_01837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
Ssl1
Motif
Other DBs
NCBI-GeneID:
18163866
NCBI-ProteinID:
XP_006667054
UniProt:
G3J7W6
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MAEKEATVFILDLGASMGKSRSGRSESDLDWSMRYVWDKISDIVSANRKTLCVGVVGLRT
DETRNPLMADDGYENISVLQELGPMTMTSLKSLQTSIKPSKTYSGDAISAIVVAVDMIDT
FTKKLKWTRKIVMITDAQSAIDPDDIGDIAHKINDSNITLTVLGVDFDDPEYGFKEEDKS
PTKADNEKTLKSLADQCTGGVFASIVEAIDEIDTPRVKQVKPYKTYDGTLVLGDPEKFPS
ALNINVERYFKTHVARQIAASTVVLKSEQGGTQSTHTLEEEPMDGVEFSAVKQARTYKVN
APDAPGGKKDVEFETLAKGFEYGRTAVHISESEHNITKLETTKSFSILGFIPWDKWEPFL
GMGDVCVTHARKFDEKSELAMSSLVWGLNELESYAVARLVTKDGKEPILVLLAPGLEPEL
ECLYDIPLPFAEDVRAYKFPPLDKVITVTGKTLTTHRLLPTDELNEAMGEYVDAMDLDSY
GMDDQGEPAEFAPIDETYNPIIHRINNAVKQRAVYPDRPIEDIPSVLLRYAKPPQDLIDR
VQDRIENLIKEAEVKKGMPDSTQSTGHANHQKVPPKAKGRRNREAVKPLSGLDVDALLGG
DSKGQITPENAVPDFKRAMATSEEISDIQSAAKQMGDIIKSLITDSFGDSKYAQAVECIG
VMRDELINMEEPEMFNAFARELKKMLLSGTLGGDRRDFWFKVRWSRLGLIEQSQSDVSKV
TADEADEIVL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaggaagcgacggtcttcatcctcgaccttggcgcgtccatgggaaagtct
cgcagcggccgcagtgaatctgacctggactggagcatgcgctatgtgtgggacaagatt
tccgatattgtctctgcgaaccgaaagacactctgtgtcggtgtagttggcctacgaact
gacgaaaccagaaacccgttgatggcggacgatggctacgagaacatctcggtgctgcag
gagcttgggccaatgaccatgacatctctcaaaagtttacaaacgagcataaaaccgagc
aagacatattctggagatgccatctccgccattgttgtcgctgtcgacatgatagacacc
ttcaccaagaagctcaaatggactcgcaagattgtcatgatcacagatgcccaaagcgcc
attgatcctgacgacattggagatatcgcacacaaaatcaacgactccaacattaccctt
actgtccttggtgtcgattttgacgaccccgaatatggcttcaaggaagaggataagtca
ccgaccaaggccgataatgaaaagactctcaaatcactagctgatcaatgcactggcggt
gtcttcgcatccattgtggaggctattgatgagattgacacccctcgtgtaaaacaggtc
aagccatacaaaacctacgacggcaccctggttctaggcgatccagagaaatttccttcc
gccctgaacatcaacgtcgaacgctactttaagactcacgtcgcccgacaaatcgcagcc
agcactgttgtgctgaagtcagagcaaggagggacacagtcgacacacaccttggaagag
gagcctatggatggagtcgaattctctgctgtcaagcaggcgagaacatacaaagtcaac
gcccccgatgcaccgggaggcaaaaaggacgtcgagtttgaaaccctggccaagggattc
gaatacggaagaactgccgtccacatcagcgagtcggagcacaacattacaaaactcgag
actacaaagagcttctcaatactgggcttcatcccatgggataaatgggagccctttctc
ggtatgggcgatgtctgcgtcacccacgccaggaagtttgacgaaaaatccgagctcgcc
atgtcgtcgcttgtctggggccttaacgagctcgagtcgtatgcggtcgctcgacttgtc
accaaggacggcaaagaaccaatcttggtgcttcttgcaccaggcctggaacctgaactc
gaatgcctctatgacatccctcttccttttgctgaagatgtcagagcctataaattcccg
ccgctggacaaagtcatcaccgtgacagggaaaacgcttactacccatcgcttgctacca
acggacgagctaaacgaagccatgggcgaatacgttgatgcaatggaccttgattcatac
ggcatggatgatcagggtgaaccggccgagtttgcgccaattgacgaaacctacaatcca
atcatccaccgcataaataatgctgtcaaacagcgcgctgtatatcccgatcggccgatc
gaggacattccttcggtactgcttcgctacgccaaaccaccgcaagatttaattgatcga
gtgcaagatcgtatagaaaatctcatcaaggaggccgaagtcaagaaaggtatgcccgac
tctacccaaagtaccggccacgctaaccatcaaaaagtaccccccaaagccaagggaaga
cgcaacagggaagctgtcaagcctctttcaggtctcgacgttgatgctctccttggcggc
gacagcaaaggccaaatcacacccgagaacgccgtgcccgatttcaagcgggccatggcg
acctcggaggaaatttcggatatacaaagcgctgccaagcaaatgggtgacattatcaag
tcactgattacggacagctttggcgacagcaagtacgcgcaggctgtggagtgtattggt
gtcatgcgagatgaattaatcaacatggaggagcccgagatgtttaacgcctttgcacgg
gagctgaagaagatgctgctctccggtacactgggcggcgataggcgagacttttggttc
aaggtacggtggtcgcgcctaggattgatcgagcagagccagtcggatgtctccaaggtc
acggcggacgaagcggacgagatagtgctgtag
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