Cordyceps militaris: CCM_01990
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Entry
CCM_01990 CDS
T03108
Name
(RefSeq) replication factor-A protein 1
KO
K07466
replication factor A1
Organism
cmt
Cordyceps militaris
Pathway
cmt03030
DNA replication
cmt03420
Nucleotide excision repair
cmt03430
Mismatch repair
cmt03440
Homologous recombination
cmt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCM_01990
03420 Nucleotide excision repair
CCM_01990
03430 Mismatch repair
CCM_01990
03440 Homologous recombination
CCM_01990
03460 Fanconi anemia pathway
CCM_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmt03000
]
CCM_01990
03032 DNA replication proteins [BR:
cmt03032
]
CCM_01990
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_01990
Transcription factors [BR:
cmt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CCM_01990
DNA replication proteins [BR:
cmt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CCM_01990
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CCM_01990
MMR (mismatch excision repair)
CCM_01990
DSBR (double strand breaks repair)
HR (homologous recombination)
CCM_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
18164019
NCBI-ProteinID:
XP_006667207
UniProt:
G3JC03
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MDAESALSKGSLDLIFNDPDKATKQFPIPTMQCLQVKQMAPSAQGGDRYRLVMSDGKHYV
QTMLATQANHVVHDEKLVRGCIARVKQYTPNNLKGKNILIILDLEVIESYGILDKIGEPS
AVESKAAETTIAGNDFYGVKKEEKPTPQQQTMPSRPAMHAGNNIYPIEGLSPFSHKWTIK
ARVTSKSEIKTWHKATGEGKLFSVNLLDESGEIKCTGFNDQCDAFYELLQEGSVYYISTP
CRVNLAKKQFSNLPNDYELAFERDTVIEKAEDQTNVPQVRFNFSTIQELQSVEKDNTVDI
IGVLKEAGEISEIVSKKTGAPYQKRELTMVDDTGYSVRVTIWGKTASSFDAQPESVVAFK
GTKVSDFGGKSLSLLSSGTISVDPDIPDAHRLKGWYDSAGRNDNFTTHQNLASVGAAAGR
TDEIKTIAQVKEENLGVDDQAYYTIKATIVFVKQDNFCYPACLSQGCNKKVQDMGDGTWR
CEKCNLSHDKPEYRYVMNFNVADHTSHQWLSCFDESGRAIVGMSADELMDLKENDEAKFM
ATFEAVNCKKLQFRCRARMDNYGEVQRVRYQVMTASFLDFKSEGDKLAEMIKQYDMNN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaatctgcgctatccaaggggtccttggacctcatcttcaatgatcccgac
aaggccaccaaacagttccccatcccgacgatgcaatgtctgcaagtcaagcagatggcg
ccctctgctcagggcggcgacagataccgcctcgtcatgagcgacggcaagcactacgtc
cagaccatgctggccacccaggccaatcacgtagtccacgacgagaagctggtgcgcggc
tgcatcgcccgcgtcaagcagtacacacccaacaacctcaaggggaagaacatcctcatc
attctcgatcttgaagtcattgagagctacggcatcctcgacaagattggcgagccctcg
gccgtcgagtccaaggctgccgagacgaccattgccggcaacgacttttacggtgtcaaa
aaggaagagaagcccacccctcagcaacaaacgatgccctcccgaccagccatgcacgct
ggaaacaatatttaccccatcgagggcctctcgcccttttctcacaagtggacaatcaag
gcccgcgtcacatccaagtcggaaatcaagacatggcacaaggcgactggcgagggcaag
ctgtttagcgtcaatctcctcgacgagagtggcgagatcaagtgcacaggcttcaacgat
caatgcgacgccttttacgagcttctccaggaaggctctgtttactacatctccacaccc
tgccgcgtgaacctcgccaagaagcaattctccaacctgcccaacgactacgagctggcc
tttgagcgcgacacggttattgaaaaggccgaggaccagaccaacgtgcctcaggtgcgc
ttcaacttttccaccatccaagagctgcagagcgtcgaaaaggacaacacggtcgacatc
attggcgttctcaaagaggctggcgagattagcgagattgtatccaaaaaaacgggcgcg
ccttaccagaagcgtgaactcaccatggttgacgacacgggatactcggtgcgcgtcacc
atctggggcaagacggctagctcttttgatgcacagcccgagtctgttgtcgctttcaag
ggtaccaaggtctcggactttggcggcaagagtctgagcctgctctcgtctggcaccatt
tccgtggacccagatatacccgatgcccaccgcctcaagggctggtacgattccgccggc
cgcaacgacaattttactacgcaccagaaccttgccagcgtcggcgctgctgcgggccgc
accgacgaaatcaagacgattgcgcaggtcaaggaggagaacctgggtgtggatgaccag
gcctactacacgatcaaggcgaccattgtctttgtcaagcaggacaacttttgctacccc
gcgtgcctgtcgcaaggctgcaacaaaaaggtccaagatatgggtgacggcacctggcgc
tgcgaaaagtgcaatctgtcgcatgacaagcccgagtaccgctacgtcatgaacttcaac
gttgccgaccacaccagccaccagtggctcagctgctttgacgagtcaggccgtgcgatt
gtcggcatgtcggcggacgagctgatggatctcaaggagaatgacgaggccaagtttatg
gcgacctttgaggcggtcaactgcaagaagctgcagtttcgatgccgtgcccgcatggac
aactatggcgaggtgcagagagtacgataccaggtcatgacggcgtcgttcctcgacttt
aagtcggagggcgacaagctggcggaaatgattaagcaatacgacatgaataactga
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integrated database retrieval system
