KEGG   Cordyceps militaris: CCM_02147
Entry
CCM_02147         CDS       T03108                                 
Name
(RefSeq) cell cycle control protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
cmt  Cordyceps militaris
Pathway
cmt03040  Spliceosome
cmt04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CCM_02147
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CCM_02147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmt03041]
    CCM_02147
   04121 Ubiquitin system [BR:cmt04121]
    CCM_02147
   03400 DNA repair and recombination proteins [BR:cmt03400]
    CCM_02147
Enzymes [BR:cmt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CCM_02147
Spliceosome [BR:cmt03041]
 Complex B
  Other components
   Prp19 complex
    CCM_02147
 Complex C
   Prp19-CDC5 complex
    CCM_02147
Ubiquitin system [BR:cmt04121]
 Ubiquitin ligases (E3)
  U-box type E3
   CCM_02147
DNA repair and recombination proteins [BR:cmt03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CCM_02147
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WDR55 ANAPC4_WD40 Beta-prop_WDR5 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_EML WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 EIF3I Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 V_ATPase_I_N PEP5_VPS11_N VID27 WD40_MABP1-WDR62_1st U-box zf-Nse Lactonase Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 18164175
NCBI-ProteinID: XP_006667363
UniProt: G3J835
LinkDB
Position
Unknown
AA seq 473 aa
MLCGISGEAPQEPVASKKSGVVYEKRLIEQYVNEHGTEPSTGEALTVEDLLPITSSRIAR
PRPPTLTSIPALLATFQNEWDSLALETYNLREQLARTREELATSLYQHDAAVRVIARLTK
ERNEARDALSRITVSGANADEMAVDTEGLPEALADRVDQVHQELSKGRKKRPVPKDWVTP
SQVAAFEVTATNALPVAQTTSLDTEGAYAAIGGLQGQAAIYAVAADSLEREISVGEPATT
TLWTGSKLIFGTSNGGLKVFEAGNQVAAASEHAGPTTGLSIHPSGDIVASVGTDKGLILY
ELDSLKRVSRTYVDASLTTVAFHPDGHLVAAGTVTGDVKLYMTKTLEQAAVFKLGAPIQA
LAFSENGFWLAATAKGQNSVTVFDLRKEGDAATAKVLETGGAVESLAWDFTGQYLATAGP
SGLTIQQYAKGAKKWTEPFRNSTGAVAVRWGESGKTLVAVNGDGVVSVVGVKA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgctctgtggaatttctggagaagctccccaagagccagtcgcgtcgaaaaagtcaggc
gtcgtctacgagaagcgtctcatcgagcaatacgtcaacgagcacggcaccgagcccagt
acaggcgaggctctcacagtcgaggacctcctccccatcacctcatcccgcatcgcgcgt
ccgcgcccgcccacactgacctcgatacccgcgctgctcgccacctttcagaacgagtgg
gacagcctcgccctagaaacatataacctgcgtgagcagctggcgcgcacgcgagaggag
ctggccacctcgctgtaccagcacgatgccgccgttcgcgtcattgcccgcctgaccaag
gagagaaacgaggctcgggatgctctgagcagaatcactgtctctggcgccaacgccgac
gagatggctgttgacacagaaggcttacccgaagccctggcagaccgcgtagaccaagtc
catcaagaactttccaagggccgcaagaagcgtcctgtacccaaagactgggtcactccc
agccaagttgccgctttcgaggtcacagctacgaacgcgctgcctgttgcgcaaacaaca
agcttggataccgagggtgcctacgctgctattggagggctacagggccaggccgccatc
tacgctgtagcggccgactctctggagcgcgagatttccgtcggcgagcccgcgaccacc
acgctgtggaccggctccaagctcatatttggtaccagcaacggcggcctcaaggttttc
gaagccggcaaccaggtcgctgccgcgtcagagcacgcagggcctactactggtctgagt
atccatcctagtggcgacattgttgcctccgttggtactgataagggccttattctgtac
gagttggacagccttaagcgtgtgagccgcacatatgttgatgcctcactcacaaccgtg
gctttccaccctgatggccatctcgtcgctgctggcactgtcactggtgatgtgaagtta
tatatgaccaaaacgctcgagcaggcggccgtcttcaagctgggtgcccccatccaggcc
ctcgcattctccgagaacggcttctggctagcagctaccgccaagggccagaactcggtc
acagtattcgaccttcgcaaagagggcgatgccgccacggccaaggttctcgagactggc
ggtgccgttgagtcacttgcgtgggatttcaccggccagtacctagccaccgctggtccc
tcgggcctgactatccagcagtacgccaagggcgccaagaaatggacagagccgtttcgc
aattccactggcgccgttgctgtgcgatggggcgagtcgggcaagactctggttgccgtc
aatggagacggagttgttagcgttgtcggtgtcaaggcgtaa

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