Cordyceps militaris: CCM_02481
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Entry
CCM_02481 CDS
T03108
Name
(RefSeq) transcription factor TFIIH subunit Tfb4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cmt
Cordyceps militaris
Pathway
cmt03022
Basal transcription factors
cmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCM_02481
09124 Replication and repair
03420 Nucleotide excision repair
CCM_02481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_02481
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_02481
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CCM_02481
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CCM_02481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
TackOD1
DUF4776
Motif
Other DBs
NCBI-GeneID:
18164508
NCBI-ProteinID:
XP_006667696
UniProt:
G3J9Y7
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MDAVDYSEHYEVTTADETPSLLSVIIDTNPRAWAVLDDGSLPLSLTAAVANLLLFINAHL
AFSGANQVAVIAAHVNRAVWLYPSSHSPKPIQDNTSADGDVAMADAPAAATTPSSANKYP
QFAQIEATVLGSLKKLMAETTERDLDSTTTQLSGALTLALCHTNKASRALGASDTAIHEA
AQTSGTTPPSPMKGRILVLSVSDSESSQYIPTMNAVFAAAHGRVAIDALALAGDATFLQQ
ACFNTGGVFLRAANPQGLLAYLMFGLVADTEAREALVAPTHDTVDFRAACFCHGNVVDTG
FVCSICLSIFCELPDNAECFTCGTKLALGSYGAKPAVIPRKKKKKKKIINGSGREETMSA
TGTPLR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgattactcggagcactacgaggtcacgacagccgacgagacgccgtcg
ttgctctccgtcatcatcgacacgaacccacgcgcctgggccgtcctcgacgacggctcc
ctccccctctccctcaccgccgccgtcgccaacctactcctcttcatcaacgcccacctc
gcctttagcggcgctaaccaggtggccgtcatcgccgcccacgtcaaccgcgccgtgtgg
ctgtacccatcctcccactctccgaaacctatacaagacaacaccagcgccgatggcgac
gtcgccatggctgatgcgcccgccgccgccacgacaccgtcctcggcaaacaaatacccg
cagtttgcccagatcgaggccacggtgctcggctcgctcaagaaactcatggccgagacg
acggagcgggaccttgacagcacgacgacgcagctgtctggcgcgctgacgctcgcgctc
tgccacaccaacaaggcctcgcgggccctcggcgcctccgacaccgccatccacgaagcc
gcgcagacgagcggcacgacgccgccctcgccgatgaagggccgcatccttgtcctctcc
gtctccgactcggaatcctcgcagtacatcccgaccatgaacgccgtcttcgccgccgcc
cacggccgcgtcgccattgatgccctcgccctcgccggcgacgccacgtttcttcagcag
gcctgcttcaacacgggcggcgtcttcctccgcgctgccaacccccagggcctgctcgcc
tacctcatgtttggcctcgtcgccgacaccgaggcccgcgaggctctcgtcgctcccacg
cacgacaccgtcgactttcgcgccgcctgcttctgccacggcaacgtcgtcgacaccggc
ttcgtctgctccatctgcctctccatcttttgcgagctgcccgacaatgctgagtgcttc
acctgcggcacgaaactggccctcgggagctacggcgctaagcccgccgtgattccgcgg
aagaagaagaagaagaagaagatcatcaacggcagcgggcgggaggagacgatgagtgcc
actggaacgccgctgagatga
DBGET
integrated database retrieval system
