Cordyceps militaris: CCM_02638
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Entry
CCM_02638 CDS
T03108
Name
(RefSeq) RNA polymerase II transcription elongation factor Ctr9, putative
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_02638
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CCM_02638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_16
TPR_14
TPR_19
TPR_7
TPR_17
TPR_6
TPR_CcmH_CycH
TPR_10
TPR_11
TPR_Slam
ARM_TT21_2nd
ANAPC3
TPR-S
Motif
Other DBs
NCBI-GeneID:
18164665
NCBI-ProteinID:
XP_006667853
UniProt:
G3JAV4
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MATIANGATNGVANGDVAAGPVSIRFSDIPSAIDIPVQGDQEDEAVEIDLEDLVDDPTEL
CTLFENEHAAKTYWMTVSLAYAKQHKIDHAIEMLIRGGGAIQSNASNPRDKVSMICCLCW
MYLWKSREAPRVAPDGIRVSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLR
ASLQAPSKTAGGIGSEKQELLKTAVKSFDDALRVSQGKNMLALMGKARAFFSLQKYPDSL
AIYQDVLQKKPDLVDPDPRIGIGCCFWQLGFKKDAKTAWERSLEITPDSKVANILLGLYH
LDASGHVPVNSEDFVKLYKKAMTEYTQKSFKLDKDLPLTCSTFSNYFLSRKSWDNADKLA
HKAIQYTDVNAIASDGWYVLARKAHYHGDTENANDFYRRADDARGGTDTGYFPAKFGAAQ
LSVMKNDLGEAKLRLEKMIQQSKSHEAMILLGTLYAEEIFANQASDAKEDKSAEMKKAIN
LLEAVRSAWKNAKRNISPDASVLLNLARLYETDNPEKALQCLQQVEQLELEQIPSSEYPE
GVTEEAEVQTAIRKFLPPQLLNNIGCFHFQAEKHVLASEMFEAALGACLKMSEKDSTVDT
DALVSSISFNLGRSYESQGLSDKAVEVYESLLNRHDDYADARARLAYIKLRQSPNKEGPD
AVAKLYQDNPSDVEVRALYGWYLGKLSRKRPGNIVEDPEFRHYKHTLQNYDKHDRYALVG
MGNLHMMQAREMRRETDADKQKRSAAYGKAVEFYEKALSLDPKNAYAAQGVAIALVEDKK
DYKNALAIFNKVRDTIREPSLYVNLGHIYAELKQFSKAIESYEIALSKEGKHNDPVILAC
LGRTWLNRGRAERDIDAYGKALECAEKALEVAPDQVHYKFNVAFVQIQLVTTIQGLQENR
RTAEQLEKAAKGLEAAIESLDAIAAHPQTPYPKHDVEQRANMARNTLRKQLERAIGKQKE
WEEVNKEKIAAAQSQREAELKRREADRAAILAKEKERQDKIRKEREEMAAQVKLETEERE
RELEAERTRKEGELTEDEEGNKVKRKRKPAPRAPGEGRSKRSSKKKGAKDDDEDSDEGIH
VKKKRRLTTRESSKFKSAEIVVDSDEDENGGGGGGDDEDDVLERADRIGHSSPAASEAGE
NESNAGVGDDDKMDVDDAPRGQDDDDDEPAPRQPAKRARRGRVVDSDEEEDE
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcgctaacggggcgaccaacggagtcgcgaatggcgatgtcgccgccggc
cccgtcagcatccgattttctgacatcccctcggcaatagacatccccgttcagggcgat
caagaagacgaagccgtcgaaatcgatctcgaagatctagttgatgacccaactgagctg
tgtaccctcttcgaaaacgaacatgcggcgaaaacgtactggatgaccgtctcccttgcg
tacgcgaagcaacacaaaatcgaccacgccatcgagatgctcatccgtggtggcggcgct
atccaaagtaatgctagcaacccacgcgacaaggtcagcatgatatgctgtctctgctgg
atgtacctctggaagagtcgcgaagctccgcgtgttgcccccgacggaatacgtgtctcc
gaggccaaaaccaaagaatactaccttcagcttgcgacatcgtcgctaaacgacgccgcg
cgactcaacccgtcatttccgcccatcttcctcgcccgcggtgttttgcttctactaaga
gcgtcacttcaagccccgtcgaaaaccgctggcggcattggctccgaaaagcaggagctc
ttgaaaaccgccgtcaaatccttcgatgacgcgctcagagtttctcaaggcaagaacatg
cttgctttgatgggcaaggcgcgcgcatttttctctttacagaaataccccgactctttg
gctatctaccaagatgtattgcagaagaagccggatctggtcgatcctgatccgcgcatc
ggcatcggttgctgtttctggcagcttgggttcaagaaagatgccaagactgcttgggaa
agaagccttgagatcaccccagactccaaggtcgctaacattctgcttggtctatatcac
cttgatgctagtggccacgtcccagtcaatagcgaggactttgtgaagttgtacaaaaag
gccatgaccgagtatacccaaaaatcattcaaactcgacaaggatctccctttgacctgt
tcgacattctccaactactttctctctcgcaaatcgtgggacaacgccgacaagctggct
cacaaggccattcagtataccgacgtcaacgccattgccagtgatggctggtatgttctg
gccagaaaggcccactaccatggtgatacagagaatgccaacgacttctaccggcgagcc
gatgatgcgcgcggaggaacagatactggctacttccctgccaaatttggtgctgcacaa
ctatcggtgatgaaaaatgacctcggcgaagctaagctgcgccttgaaaagatgatacaa
caatcaaaaagccatgaagccatgattcttctcggcacactgtacgccgaggagattttt
gccaaccaagcaagcgatgccaaggaggacaaatcagccgagatgaagaaggccattaat
ctcctggaagcggtcagaagtgcctggaagaatgcgaaaagaaacatctctcccgacgct
tctgtcctgctcaatctcgcacggctctatgagaccgataaccctgaaaaggcgctccag
tgcttgcagcaagtagagcagctggagctggaacagatcccttcttcagaataccccgag
ggcgttacagaggaagcagaagtgcagactgctatacgcaaattccttcctccccaactc
ctgaacaatattggctgcttccacttccaggccgagaagcacgtgctggcgagcgaaatg
ttcgaggcagccctcggtgcatgcctgaaaatgagcgaaaaagacagcacggttgatacc
gatgccctagtgtcgtcaattagcttcaatcttggccgcagttacgagtctcaaggtctc
tcagacaaagcggtcgaagtgtacgaaagtcttttgaaccgccatgacgactacgccgac
gctcgtgctcgtctagcatacataaaactgcgacaaagcccgaacaaggagggccctgac
gccgttgccaagctctatcaggacaaccctagcgatgtcgaagtgcgtgccctttacgga
tggtacttgggaaagctttcgagaaagcggcctggcaatattgtcgaggacccagagttc
cgccactacaagcatactttgcaaaactacgacaaacatgatcgatatgccctggttggt
atgggaaatcttcatatgatgcaagcccgcgagatgagacgcgagacagatgccgacaaa
cagaagcgcagtgcggcctatgggaaagctgttgagttttacgaaaaggctttgtcattg
gatccgaaaaatgcgtacgccgcacagggagtcgccatcgctctggtagaagataagaag
gactataagaatgcacttgccatcttcaacaaggtgcgcgataccatcagagagcctagc
ctctatgtcaacctgggccacatctacgccgagctgaagcaattctccaaagccatcgag
agctacgagattgccctgtcgaaagaaggcaagcacaatgacccagtcatcctggcctgt
cttggccgtacctggctgaatcggggccgcgcagagcgtgacattgatgcatatggcaag
gccctcgaatgtgctgaaaaggcattggaggttgcccctgaccaagttcactataagttc
aacgttgcgttcgtccagatccagctggtgaccaccatccagggcctgcaggagaacagg
cgcacggcagaacagttggagaaggcagctaagggcctcgaggcagcaatcgagtcactg
gatgctatcgcagctcacccccagacgccgtaccccaagcatgacgtcgagcaacgtgcc
aacatggctcgaaacacgctgcgcaagcagcttgagcgagccattgggaagcaaaaggag
tgggaggaagttaataaggaaaagattgctgccgcacagagccagcgggaagcggagctc
aagcgtcgcgaggccgaccgtgccgcaatcctagccaaggaaaaggaacgccaggacaaa
atccgcaaggagcgtgaagaaatggctgcccaggtcaagctcgagacggaggagcgtgag
cgagaactggaggcagagcgcacgcgtaaggagggcgaattgacagaggacgaagagggt
aacaaggtgaagcgcaagcgcaagcctgcccctcgcgctcccggggagggccggtcgaag
cgctcctccaagaagaagggcgccaaggacgatgacgaggactctgacgaaggcatccac
gttaagaagaagcgccgtctgacgacgcgcgaaagctccaagttcaagtcggccgagatt
gtcgtggacagcgacgaagacgagaacggcggcgggggcggaggagatgacgaggacgat
gtcctcgagcgggcggaccgcatcggtcactccagtccggccgcctcggaggcgggcgag
aatgagtccaacgcgggcgtgggcgacgacgacaagatggacgtggacgatgcgccgcgc
gggcaagacgacgatgacgacgaacctgcaccccgtcagcctgccaagagggcacgccgc
ggccgggtcgtcgacagcgacgaggaagaggacgagtaa
DBGET
integrated database retrieval system
