Cordyceps militaris: CCM_02779
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Entry
CCM_02779 CDS
T03108
Name
(RefSeq) tRNA processing endoribonuclease Trz1, putative
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmt03016
]
CCM_02779
Enzymes [BR:
cmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CCM_02779
Transfer RNA biogenesis [BR:
cmt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CCM_02779
Prokaryotic type
CCM_02779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
UBQLN1
Motif
Other DBs
NCBI-GeneID:
18164806
NCBI-ProteinID:
XP_006667994
UniProt:
G3JBT5
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MTTTVELATVPTADTPGTCIYVHHEKRSYVFGHLAEGTQRAFSCRKLHLGSTEHVFLSGA
VGWSQMGGLIGYLLSIGGAFDAAKEFRATENSKRAEKGQKMLRQLRNEGVTVHGADNLCH
ILASARPVIFRQPVSVRAMEHREDPRGADAALTAPDWEDESIRVWKIPVPRARSSSPTKR
RCSGSATSNGSSKDMYKPASEPSDPSVAALIMERIMFTGSHDKIVMVPRSIDELKPDDDA
IILDGNSLRRYKGPFVSSGAKAWVFPDADSAPPKGDADAINAISNGALPPTSYSGTSMSY
IMKCQDRRGKFNAQAAKELGVKPQSFKLLTAGETVTTESGTIVTPDMVLGERQLGKGIAV
ADIASLDFLDAFFERPEWTNAEIMSEITSMYWILGDGLASNPKIHQYIKTHPNMKHILCS
PGTCPNMVSNASSAEMLAKLRRIDPERFPFVSFDNTVDYQTPDDAPSIELGRAGHKVQIM
PRLFYKDEAVAPFPDLQLAYNSVDEETLALAQEANAKATDPAFLARIERQEADIPNRDAE
IIPLGTGSSVPNKHRNVSGTLLLVPGIGNYLLDCGEGTLGQIKRLFGPAGTAAVLRDLRC
IVVSHLHADHHLGMATTIKAWYEQALADQSDALLAISCIGRYRAVLQEIAQVEDIGFHRL
RFPSCTGDRGDRDKTTAEDLAALGAPDAFGLRAIKRVPVAHCWRAYATELTLVSGLRVAW
SGDCRPSSRFAQACRGAHLLVHECTFGDDMQDHARYKMHSTMGEALGVAREMRARRTLLT
HFSQRYGKADALQPSVDGPDDADREQSVLLAHDLMRVKLGDFQKAACYIPAIAQVMAKTS
DT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtcgagctggccacggtgccaacggccgatacgccgggaacatgtatt
tatgtgcaccacgagaagcgctcctacgtctttggccatttggccgagggcacgcagcgc
gccttttcgtgtcgcaagctgcacctcggcagcaccgagcacgtcttcctctcgggtgcc
gtcggctggtcgcaaatgggcggcctaattggctacctcttgagcattggcggcgctttt
gacgcggccaaggaatttcgcgccacagagaactcgaagcgcgccgaaaagggacagaag
atgttgcgtcagctccgaaatgagggcgtgacagtccacggcgcagacaacctgtgccac
attctcgcctcggcccgccccgtcatttttcgccagcccgtctccgtgcgtgccatggaa
cacagggaagacccgcgtggcgctgacgcggcgctgacggcaccggactgggaggacgag
tcgattcgcgtgtggaagataccagtgccgagggcgcgctccagcagcccaaccaagcgc
cgatgcagcggcagtgcgacaagtaatgggagcagcaaagacatgtacaagccggcctcg
gagccatcagacccctctgtggcagcgttgatcatggaaaggatcatgttcaccggtagc
cacgataaaatcgtcatggttcctaggagcattgacgagctgaaaccagacgacgacgca
atcatattagatggcaatagtctgcggcgttataagggcccttttgtcagcagcggagcc
aaggcgtgggtgttccctgatgccgactctgcgccgcccaagggagacgcggatgccatc
aacgctatttcaaacggcgcactgccgccgacgtcgtactcggggacatcaatgagctac
atcatgaagtgtcaagaccgacgaggcaagttcaacgcccaggcagcaaaggaactcggt
gtaaagccccaaagtttcaagcttttgacggctggtgaaacggtcacgacagagagcggc
actatcgtcactcccgacatggtgcttggagagcgccagctcggcaagggtatagctgtc
gcagacattgccagcctcgacttcctcgacgccttctttgagcgtccggagtggacaaat
gccgaaatcatgtcagaaataacctccatgtactggatcctgggcgacgggcttgcctcg
aatcccaaaatccatcaatacatcaagacgcacccaaacatgaagcatattctatgttcc
cccggcacatgccccaacatggttagcaatgccagctctgccgagatgctcgccaagctg
cgccgcatcgatcccgaacggttcccctttgtctcgtttgacaacaccgtcgactaccaa
acccccgacgatgctccgtccattgagcttggccgagccggccacaaggtccaaatcatg
ccgcgcctgttttacaaggacgaggccgtggcgccgttccccgacctgcagctggcctac
aactctgtcgacgaggagaccttggcgctcgcgcaagaagccaacgccaaagccaccgac
ccggccttcctcgcgcgcatcgagcgccaagaagccgacattcccaaccgcgacgccgaa
atcatccccctcggcaccggctccagcgtgcccaacaagcaccgcaacgtgtccggcacg
ctgctcctcgtccccggcatcggcaactacctcctcgactgcggcgagggcacgctcggc
cagatcaagcgtttattcggccccgcgggcaccgccgccgtcctgcgcgacctgcgctgc
atcgtcgtcagccacctccacgccgaccaccacctgggcatggccaccacgatcaaggcc
tggtacgagcaggccctcgccgaccagagcgacgcgctcctcgccatcagctgcatcggc
cggtaccgcgccgtcctgcaggaaatcgcccaggtcgaggacattggcttccaccggctg
cgcttcccgagctgcaccggcgaccgcggcgaccgcgacaagaccacggccgaggacctg
gccgccctcggcgcgcccgacgcgttcggcctgcgcgccatcaagcgcgtgcccgtcgcg
cactgctggcgcgcctacgccacggagctcacgctcgtctcgggcctccgcgtcgcctgg
tccggcgactgccgcccgtcgagccgcttcgcgcaggcctgccgcggcgcgcacctgctg
gtgcacgagtgcacctttggcgacgacatgcaggaccacgcccgctacaagatgcacagc
accatgggcgaggcgctcggcgtggcccgcgagatgcgcgcccgccgcaccctgctcacc
cacttttcgcagcgctacggcaaggccgacgccctgcagccgagcgtcgacgggcccgac
gacgccgacagggagcagtcggtcctgctcgcccatgacttgatgcgtgtgaagctgggc
gactttcaaaaggccgcgtgctacattccggcgattgcgcaggtcatggccaagacgtcg
gatacgtag
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