Cordyceps militaris: CCM_02999
Help
Entry
CCM_02999 CDS
T03108
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSM4, putative
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_02999
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_02999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_02999
03041 Spliceosome [BR:
cmt03041
]
CCM_02999
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CCM_02999
mRNA degradation factors
5'-3' decay
Lsm complex
CCM_02999
Spliceosome [BR:
cmt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CCM_02999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TPR_RPAP1
SM-ATX
Motif
Other DBs
NCBI-GeneID:
18165026
NCBI-ProteinID:
XP_006668214
UniProt:
G3J889
LinkDB
All DBs
Position
Unknown
AA seq
163 aa
AA seq
DB search
MAGPRTRSLRASHCAVLLARLLASAFFLANALVSLQLPLGLLNAAQGHPMLVELKNGETL
NGHLVNCDTWMNLTLTQVVQTSPEGDKFMRLKEVYVKGNNIKYLRVAEEIIELATEAQKN
QQGNFRGGRGGQSRGDHGGRGGGDRGRGGRGGGRGGRGRGRGQ
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcccgcgcacgcgatcgctgcgcgcatcccactgcgctgtcttgctcgctcgc
cttttagcatctgccttctttcttgctaacgcgcttgtttccctgcagcttcctctcggc
ctgctcaacgccgcccagggccacccgatgctcgtcgagctcaagaacggagaaaccctc
aacggacaccttgtcaactgcgatacgtggatgaacctcacactgacacaggttgtccaa
acaagtcctgaaggagacaagtttatgcgcctaaaagaggtctacgtcaagggcaacaac
atcaagtacctacgagttgctgaagaaatcatcgagcttgccaccgaggcgcaaaagaac
cagcagggcaacttccgcggcggtcgcggcggccagtcaagaggagaccatggcggtcgt
ggaggcggcgacaggggacggggaggccgtggcggtggccgtggtgggcgaggtcgcggt
cgcggacagtga
DBGET
integrated database retrieval system
