Cordyceps militaris: CCM_03110
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Entry
CCM_03110 CDS
T03108
Name
(RefSeq) DEAH-box RNA helicase (Dhr1), putative
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmt03009
]
CCM_03110
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CCM_03110
Ribosome biogenesis [BR:
cmt03009
]
Eukaryotic type
90S particles
Helicases
CCM_03110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
HA2_N
OB_NTP_bind
AAA_22
AAA_19
nSTAND3
DUF6218
ATPase
AAA_30
FtsK_SpoIIIE
ResIII
AAA_23
AAA_16
PhoH
T2SSE
Motif
Other DBs
NCBI-GeneID:
18165137
NCBI-ProteinID:
XP_006668325
UniProt:
G3J8V6
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MAKFVARQRKHRVLARERAKENGRHDVADPNKEIIDSADKQEWADKRARMKEELKQEAGK
MNSKKAKRLEKYIDTKLRKDENRELLSKLASRKIDTSLFSSSKSLGQGRETKKQSLSRAL
REARAGIEDGEALLEERREVAEDDSDEYNDKPTLAAKPTPVATSKPETKPAESTIVTAQL
SDAVGSGLKRPLEVDEEGRPLIQKRQKRGGVKSKVRAPVELAFVESENGSDEDEDEWNGV
SDDNEGSEAEEDEEDDKEDEEDDKEDDKEDEEDDSDDEDGEDEDEDAAAQRSQRSSMFKA
WATQQRNEALGFKPNEPTTSNMVIPRPDNFVPRAPEQEPLPVELQPTENTDRKAFSVTVT
RTPEIQEARLKLPVVAEEQKLMEAIHNNNIVVICGATGSGKTTQVPQFLYEAGYGAADSE
TPGMIGVTQPRRVAAVSMSKRVAEELGDHSSAVAYQIRFEGSVDDKTAVKFMTDGILLRE
IAQDITLKKYSAIIIDEAHERSVNTDILIGMLSRVIKLRAELAEEDAKVKPLKLIIMSAT
LRIEDLTMNPNLFPTPPPVVEVEGRQHPVTMHFARKTHHDYVEEAFNKISRGHRKLPPGG
FLVFLTGRNEILQLSKRLKAAFGGLRSAEGPQVRISASEAPMEVEDLDFGDVDDNTHDDL
DEIISDGEEEEDEFEIEEEQEAAPLKVQILPLYSLLPTREQMRVFEPAPEGTRQIILATN
VAETSLTIPGTRFVFDCGRVKDRNYDRQSGVQSYDIGWISKASANQRAGRAGRTGPGHCY
RLYSSAVYERDFQEFADPEILRMPIEGVVLQLKSMNLQNVVNFPFPTPPERHRLATAEKL
LEYLSAISSSGQITRIGQTMSVFPLSPRFARILLVGHLHDCLPYTIALVAGLSAAEVFLP
EAQAVPALAVAAQEDGSTLRTNADVMAETQQVQARRLFNEVHRHFCYLDDKSDAMKLLQV
VCEFAHEPTEAWCASHFVRFKVLREVQQLRRQITDLLRTTIPSFASLQHKERLDPPSPKQ
VAALKQMAAAGFIDQVAIRADKAPVPPAHHRKPRRAIDVPYVPLVPLRGASTGGGEDGGL
VYIHPTSPLAHLGVQECPEYVVYSYLQRATAPLGDGGAKTPKTRMHALTDVSGAQLAGLA
KGTSLLTYGKPIKETRAPSAAVDAGATRECWVNLYLRAENTGGQGWQLPAKKVKQRKIAG
RGWVVE
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattcgttgctcgacagcgcaagcacagggtgcttgcccgtgagagagccaag
gaaaatggccgccacgacgtcgcagaccccaataaagaaatcatcgactcggccgacaag
caggaatgggcggacaagcgcgcgcgcatgaaggaggagctgaagcaggaggctgggaag
atgaactctaagaaggccaagcgcctcgaaaagtatattgacacaaagctgcgaaaagac
gagaatcgagagctgttgtcgaaattggcgtcaagaaagatcgacacgagtttattttcg
agcagtaaatcgctgggtcaaggccgcgagacaaaaaaacagagtctgtcaagagcgctg
agagaggccagggccggaattgaggatggagaggcgctcttggaggagagacgcgaggtg
gcggaggacgatagcgacgagtataacgacaaacccacccttgcggcaaagcctacgccc
gtcgcgacctcgaagcccgagaccaagcctgcagaatctacaattgtgaccgcacaactc
tccgacgcagtggggtcaggattgaaacgaccactcgaggttgatgaggagggcagacct
ttaatccaaaagcgacaaaaacgaggcggcgtcaagtccaaagttagggctcctgtcgag
cttgcctttgtagagagtgagaatggaagcgacgaagacgaagacgaatggaatggcgtc
agtgatgacaatgagggatccgaagccgaggaagacgaggaagacgacaaggaagacgag
gaagacgacaaggaagacgacaaggaagacgaagaagatgatagtgatgacgaagacggc
gaagatgaagatgaggatgcagcagctcaaagatcacaaagatcttcaatgttcaaagcc
tgggctacacaacaacgcaacgaagctctaggcttcaagccaaatgagccaacgacaagc
aacatggtgattccgaggccggataacttcgttcctcgggccccagagcaagaaccgcta
cctgtggagctgcaaccgactgaaaatacagacagaaaagcgttcagtgtcactgtcaca
agaacaccggagattcaggaagcgcgtttgaaactgccagttgttgccgaggaacagaag
ctgatggaagctatccacaataacaacattgtcgtcatatgtggcgccacgggttccggc
aagacgacgcaagtaccgcaatttctgtacgaagccggctatggagctgcggactcggag
acaccgggcatgattggcgtcacgcagccacgtcgagttgccgctgtcagtatgtctaag
cgtgtagccgaggaactcggtgaccactcttcggctgttgcctatcagattcgattcgag
ggaagcgttgacgacaagactgctgtcaaattcatgacggatggtattctgctccgcgaa
atcgcccaagatattactctcaagaaatactccgccatcatcattgatgaagcccacgaa
agaagtgtaaacacggacattttgattggcatgctgagcagagtcatcaagctccgggcc
gagctggcagaggaagatgccaaggtcaagccgctgaagctcatcatcatgtctgctact
cttcgcatcgaagatctcaccatgaaccccaacttgttccccacacccccgccagtggtc
gaggtggagggcagacagcacccagtcacgatgcattttgcccgcaagacacaccacgac
tacgtcgaagaagcgttcaacaaaatcagccgtggacacaggaagcttccgcctggtgga
ttcctcgtatttctgactggtcgcaatgaaattctacaacttagcaaacgcttaaaagcc
gcgtttggtgggctgagatctgccgaaggccctcaagtacggatatccgcttccgaagca
ccgatggaggtggaggatctcgactttggcgacgtggacgacaatacgcacgacgacctg
gacgagataatttcagacggtgaggaagaggaagacgagtttgaaattgaggaagagcag
gaagccgctcctctaaaagtacagattctgcccctctattcgctgcttcctacgcgcgag
cagatgagggtctttgagcccgcacccgagggcacgcgacagattatcctggccaccaac
gtcgctgaaacctccttgaccatcccgggcactcgctttgtgtttgactgcggccgcgta
aaggatcggaactacgaccgccaaagcggcgtgcaaagctacgacattggttggatcagc
aaagccagcgcgaaccagcgcgcaggtcgcgcaggccgtacgggccctggtcactgctac
cgactgtactcgtctgcggtttatgagcgcgactttcaggagtttgccgaccctgagata
ttgcgcatgccgattgagggtgtcgttttgcagctcaagtctatgaacctgcagaatgtc
gtcaactttccctttcccacgccaccggagcggcatcgcctggccacggccgagaagctc
ctagaatacctgtccgccatctcctcgagcggccagattacacggatcggccagaccatg
tccgtgtttcccctgtcgccccgctttgcacgaatcctcctcgtcggccacctgcacgac
tgcctgccgtacaccattgccctcgtggccggcctgtcggctgccgaagtgttcctcccc
gaggcgcaggccgtgcccgcgctcgccgttgccgcccaggaagacggcagcacgctgcgc
acaaacgccgacgtgatggccgaaacgcagcaggtgcaggcgcggcggctgttcaacgag
gtgcaccgccacttttgttacctcgacgacaagtcggacgccatgaagctgctgcaggtc
gtgtgcgagtttgcgcacgagccgaccgaggcgtggtgcgcgagccactttgtgcgcttc
aaggtgctgcgggaggtgcagcagctgcgcaggcaaatcacggacctgctgcggacgacg
atcccgtcgtttgccagcctccagcacaaggagaggctggacccgccgtcgccgaagcag
gtggcggcgctgaagcagatggcggccgcgggcttcatcgaccaggtcgcgattcgggcc
gacaaggcgccggtgccgcccgcgcaccaccgcaagccgaggcgggccatcgacgtgccg
tacgtgccgctcgttccgctccgcggagcgtccaccggcggcggcgaggacggcggtctc
gtgtacattcaccccacgtcgcccctggcgcacctcggcgtgcaggagtgccccgagtat
gttgtctactcgtatctgcagcgcgcgacggcaccgctcggcgacggaggggccaagacg
cccaagacgaggatgcacgcgctcaccgatgtctcgggcgcgcagctggccggcctcgcc
aagggcacgtcgctgctgacgtacggaaagccgatcaaggagacgcgcgcaccgtcggcg
gctgtggacgcgggcgccacgcgcgagtgctgggtcaacctgtacctgcgggcggagaat
acgggtgggcagggctggcagctgccggcgaaaaaggtcaagcagagaaagattgccggc
cggggatgggtggttgaatga
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