Cordyceps militaris: CCM_03135
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Entry
CCM_03135 CDS
T03108
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_03135
03041 Spliceosome [BR:
cmt03041
]
CCM_03135
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_03135
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCM_03135
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CCM_03135
mRNA cycle factors
Common to processing body (P body) and stress granule
CCM_03135
Spliceosome [BR:
cmt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CCM_03135
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CCM_03135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
18165162
NCBI-ProteinID:
XP_006668350
UniProt:
G3J935
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MADQINMNGLSIADGHARSYIPPHLRGRGGASAAPPLPQKTALLRLRLRPRLWPLVLLSL
ALFLALLLALLLPTAAALGLGGYGGGRNFGGEAPAGGFQGNNRRGGWGGRGGYSGGGGHE
GGQGGGQGGGNYSARGSGDGQWRDGKHIPGPANPRVERELFGTADDPSKQHTGINFEKYD
DIPVEASGHDVPEPVHNFTSPPLDEHLCRNIELARYKTPTPVQKYSIPIVMGGRDLMACA
QTGSGKTGGFLFPILGQSFINGPSAVPGGAPGQFGRQRKAHPTALVLAPTRELVSQIYEE
SRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLV
LDEADRMLDMGFEPQIRRIVEGEDMPGVTDRQTLMFSATFPRDIQVLARDFLKDYVFLSV
GRVGSTSENITQKVEYVEDVDKRSVLLDILHTNAGGLTLIFVETKRMADSLSDFLINQSF
PATSIHGDRTQRERERALEFFRNGRCPIMVATAVAARGLDIPNVTHVVNYDLPTDIDDYV
HRIGRTGRAGNTGIATAFFNRGNRGVVRELLDLLKEANQEVPSFLEAIARESSFGGGGRG
GRSRGGGGGGRGAANRDYRKVGGPGGLGGGFGSGQGGGSFGGGQGGYSGGGGGYNGGGGG
YGGGGGGGSYGNPSGPGNQSWW
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaaatcaacatgaacggcctcagcattgctgatggccacgcgcgctcctat
atccctccccacctgcgcggccgtggtggtgccagcgctgccccccccctgccgcagaaa
acggcgttgctccggctccggctccggccccggctctggcccctggtcctcctgtccctg
gccctcttcctggcgctgctcctggcgctgctcctaccaacggcggcggctcttggtctg
ggtggctatggcggcggtagaaactttggcggcgaagccccggcgggcggcttccagggt
aacaaccgacgtggcggctggggcggccgtggtggttactccggtggtggtggccacgag
ggtggccagggcggcggccaaggcggcggcaattattctgcacgcggctctggtgatggc
cagtggcgcgatggcaaacatattcccggccctgccaacccacgcgttgagcgtgagctt
tttggtaccgccgacgacccttcgaagcagcacactggtatcaacttcgagaagtatgac
gacattcctgtcgaggcttccggccacgatgtcccagagcctgttcacaacttcacctcg
ccccctctggacgagcatctgtgccgcaacatcgagcttgcccgctacaagacccccacg
cctgttcagaagtactctatccccattgtcatgggtggtcgtgatctgatggcttgtgcc
cagaccggttctggcaagacgggtggtttccttttccctatcctcggccagtccttcatc
aatggaccctcggccgttcccggcggtgctcctggccagttcggtcgccagcgcaaggcc
caccccaccgcccttgtcctggcccccactcgtgagctcgtctctcagatctatgaggag
tctcgcaagtttgcttaccgctcttgggttcgcccttgcgtcgtgtacggtggtgccgat
attggctctcagctccgtcagattgagcgtggatgcgatctgctcgtcgccacccccggt
cgacttgtcgatctcattgagcgtggccgcatctctctgtgcaacattaagtaccttgtg
ctcgacgaggccgatcgcatgctggacatgggtttcgagccccagattcgccgcattgtc
gagggcgaggacatgcccggtgtcactgaccgtcagactctcatgttctcggccaccttc
ccccgcgatatccaggtgctcgctcgcgatttcctcaaggactacgtcttcctttccgtt
ggtcgcgttggttccacctcggagaacattacccagaaggttgagtatgttgaggatgtc
gacaagcgctcagtcctccttgatattctccacaccaacgctggtggcctcaccctcatt
ttcgttgagaccaagcgcatggccgattcgctctccgactttctcatcaaccagagcttc
cccgccacctctattcacggcgaccgcactcagcgtgagcgtgagcgtgctctcgagttt
ttccgtaacggccgctgccccattatggtggctactgctgtcgctgctcgtggtctcgat
atccccaacgttactcacgtcgtaaactacgacctgcccaccgacatcgacgactacgtt
catcgtattggtcgtaccggtcgtgctggtaacactggtatcgccaccgctttcttcaac
cgtggcaaccggggtgttgttcgtgagctcttggatcttctcaaggaggcgaaccaagag
gtcccttcattcctcgaggccattgcgcgtgagtcttccttcggcggcggtggtcgcggt
ggtcgctcccgcggcggcggcggcggcggccgtggtgctgccaaccgcgattaccgcaag
gtgggcggcccgggtggcctcggcggcggcttcggaagcggccagggcggtggtagcttc
ggtggtggccagggtggctacagcggtggcggtggcggctacaacggcggtggcggcggc
tacggcggtggcggtggtggtggcagttacggtaacccctccggccctggcaaccagtct
tggtggtaa
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