Cordyceps militaris: CCM_03152
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Entry
CCM_03152 CDS
T03108
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_03152
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_03152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_03152
03041 Spliceosome [BR:
cmt03041
]
CCM_03152
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CCM_03152
mRNA degradation factors
5'-3' decay
Lsm complex
CCM_03152
Spliceosome [BR:
cmt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CCM_03152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
Glyoxalase_7
Motif
Other DBs
NCBI-GeneID:
18165179
NCBI-ProteinID:
XP_006668367
UniProt:
G3J952
LinkDB
All DBs
Position
Unknown
AA seq
83 aa
AA seq
DB search
MASQLLPLELIDKCVGSRIWVIMKGEKEFSGTLVGFDDYVNMVLEDVTEFSDYTGNHTKL
PKILLNGNNICMLIPGGEGPGEA
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcaattactacccctcgaactcatcgacaagtgtgttggatcgagaatttgg
gtcataatgaagggagagaaggaattcagcggcactcttgttggtttcgacgactacgtc
aacatggttctggaagatgtcacagagtttagcgactacactggcaaccacacaaagctg
cccaagattctgctcaacggcaacaatatctgcatgttgattcccggtggcgaaggtcct
ggggaagcttga
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