Cordyceps militaris: CCM_03183
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Entry
CCM_03183 CDS
T03108
Name
(RefSeq) chromatin assembly factor 1 subunit C
KO
K10752
histone-binding protein RBBP4
Organism
cmt
Cordyceps militaris
Pathway
cmt03082
ATP-dependent chromatin remodeling
cmt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CCM_03183
03083 Polycomb repressive complex
CCM_03183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_03183
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CCM_03183
Histone modification proteins
HAT complexes
HATB complex
CCM_03183
HDAC complexes
Sin3A-HDAC complex
CCM_03183
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CCM_03183
PRC2.2
CCM_03183
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CCM_03183
Heterochromatin formation proteins
Other heterochromatin formation proteins
CCM_03183
Chromatin remodeling factors
NuRD complex
CCM_03183
NuRF complex
CCM_03183
NuRF complex (fruit fly)
CCM_03183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
NBCH_WD40
MIOS_WD40
Beta-prop_DCAF12
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
18165210
NCBI-ProteinID:
XP_006668398
UniProt:
G3J983
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MDEHATQFAWISFVEEESFARMRWLFGFGLRGDTHCGHSQLAFSPIDPRYRWIMSPPSMD
RDDLVDLTHDEEDDQGERLINEEYKTWKKNSPFLYDMILGTALTWPTLTVQWFPDVKEPP
GKNFRMHRLLLGTHTSDDSPNFLQIADVQIPKALAPNPDDYEDDRGEIGGYGRSGDIAAI
KCDIVQKIEHPGEVNKARYQPQNPDIIATLCVDGKILIFDRTKHPLQPSFASKINAQIEL
IGHKAEGFALNWSPHEQGCLVSGSEDKTMCLWDLKKLESDTRILKPWRRYNHHTAVVNDV
EYHPISRNFIGSVSDDLTLQIVDTRNSDTGKAVVVAKGGHLDAINALSFNPNSEVLVATA
SADKTIGIWDLRNVKEKVHTLEGHNDAVTSLSWHPTEAAILGSGSYDRRIIFWDISRVGE
EQLPDEQEDGPPELLFMHGGHTNHLADFSWNRNEPWMVASAAEDNLLQIWKVAEALVGKD
DGELPVDELDQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcatgcaacacagtttgcatggatttcctttgtggaagaagagtcattcgcc
cgaatgcgatggctgttcggctttggcctgaggggcgacacgcactgtgggcacagccag
ctagcgttctctcctatcgacccaagataccggtggatcatgtcgcccccgagcatggac
cgcgatgatctcgtagacctgacacacgacgaggaggacgaccagggcgaaagactcatc
aatgaggagtacaaaacttggaagaagaacagtccgttcttgtacgacatgattcttggc
accgctcttacatggcctactcttactgttcaatggtttcctgacgtcaaggagcccccg
ggcaaaaacttccgcatgcaccgcctgctgcttggcactcacacatccgacgacagcccc
aactttttgcagattgccgacgttcaaatccccaaggcgctcgcgccaaacccggacgat
tacgaggacgaccgtggcgagattggaggctatggcaggtcgggagatattgctgcaatc
aaatgtgatattgtccagaagattgagcaccccggcgaagtcaacaaggcccgctatcag
cctcagaatccagacatcattgctacgctctgtgtcgatggaaaaattttgatcttcgac
cgcacaaagcacccactccagccctcattcgccagcaagattaatgcccagatcgagctg
attggtcacaaggccgagggcttcgctctgaattggagtccccatgagcagggctgcttg
gtctctgggagcgaggataagaccatgtgtctttgggacctgaagaagcttgaatctgat
acgaggatcctcaagccttggcgtcggtacaaccaccatactgcagtcgtcaacgatgtt
gaataccaccccatctcaagaaactttattggctcggtctctgacgaccttacactgcaa
atcgttgatacccgtaacagcgatacgggcaaggctgtagtcgtagccaagggtggccat
ttggatgctatcaacgccttgtcctttaaccccaactccgaggtcctggtggccactgcc
tctgctgacaagacaatcggtatctgggatcttcgcaatgttaaggaaaaggtgcatact
ctggaaggccacaacgacgccgtcacatcattgtcgtggcacccaaccgaagctgctatt
cttggtagcgggagctatgacagacgcatcatcttctgggacatctctcgcgttggcgag
gaacagcttcctgatgaacaagaagacggccccccagaactgcttttcatgcacggtggc
cacacgaaccatcttgctgactttagctggaaccgcaacgagccgtggatggttgccagt
gctgctgaggataatcttctgcaaatttggaaggtcgccgaggcccttgttgggaaggat
gacggtgagctgcccgtggacgagcttgaccaatag
DBGET
integrated database retrieval system
