Cordyceps militaris: CCM_03221
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Entry
CCM_03221 CDS
T03108
Name
(RefSeq) cell wall biogenesis protein phosphatase Ssd1, putative
KO
K18748
protein SSD1
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_03221
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
CCM_03221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
DUF7524
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
18165247
NCBI-ProteinID:
XP_006668435
UniProt:
G3J9H2
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MSILIKSRGPSSGGSRLVSVWFTSDKTLALTGLGGHLLLLQATGRTKLTNCLQRMSQQQG
QQQGQPTAPQPAGGVHGPAGRRLHIAHRRSPSELTPLMSMFANPGMEQLAIQQQIELLQQ
QQQQIQATHQQYVNMGMIPPGQPMAHNGAFNPLQSMGNMSQNAFQFPNQIPQNVSMAPPA
QPLSHRRNQSALPNMGMGPPPAPSAGASGAAFGNFEAPSGHNRENSSARGGRGGGGGHQR
RHSLALADAKKAAEIAQQKRTTTGFQFPGPNATGDKAEEENKTASQPSVEGLAPSSALRG
GRGGHGRSQSMAVNGRGAATRGNFSIGGDADFQRRGGGGGHNRTGSRSFEGNWRTQSQNQ
EQGGAPQSQSFQPGHRSRASMNQSVSSIGAFQYNPGNLQLPGQMMMPQMYGQSLNSVQLS
QLQALQAAQMSGQQFQGLQAQQGGQQQQQQQQQRKTLFTPYLPQASLPALLGDGQLVSGI
LRVNKKNRSDAYVTTQDGLLDADIFICGSKDRNRALEGDLVAIELLDVDEVWSQKREKEE
KKKRKDITDTRSNSTNQGNQSSNRTDDSGNVEGGLRRRGSLRQRPTQKKNDDVEVEGQSL
LLVEEEEINDEQKPLYAGHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDGN
SGRNDSRHQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYADRIFVACIKRWPIT
SLHPFGTLVEQLGPMGDLKVETDALLRDNNFSSDEFSDAVLRSVGLQDWDLAKEDEASIS
ARRDFREERAFTIDFNGGAELGNAVHVKTRPDGKIEIGIHVPDIAHFVKPNSLVDREAKK
RGTSVQLVDRFCALLPPKLAGEVCSITPAEERLAVSVVFSVNPHNGSVAEGDAWVGRSIV
NSVGKLSLADIDAAAADDSAYKNQAVPLKTVKILQAVAQKFREARLGAGGEPIAPLRLFQ
QLDDENQPVQFNIFDSTESLELVEELMHKANAYIAQRLAEGLPEKALLRRQSPPNPRRLQ
TFGERMNALGYDVDASGSGALQNSLFKVEDSELRQGMETLVVKSMQRAKYFIAGKTPKQL
WQHYCLNLPLYTHFTSPTRRYADIVVHRQLEAVLSEGKIEYSEEMESLVKTVESANTKKE
SAQNAQEQSVHIEACRKMDKLRQDTNGDLITEGIVVCVYESAFDVLIPEWGFEKRVHCDQ
LPLKKAEFRKEKRVLELYWEKGVPSSAYVPEDERPKAAASQRMTNALAAAKQAEVAAKAR
KEREEATRKQTETGTMSTDDVDALFDDDEEDNVSDVTEAMAGASLGDRPTQSVPSSPDRS
ASDAAALQRARSDSRMPAGDAVESRLTNKEKYLKLFKLREEDGEYIQDVTEMTRVPIILK
TDLTKSPP
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcttgataaagtctcgaggcccatcgagtggcggctcaaggcttgtgtcagtg
tggttcacatcagacaaaacgttggcattgacgggccttgggggtcatttactattatta
caggccactggcagaacaaagctgaccaactgccttcagcgcatgtcccagcagcagggc
caacagcagggccagcccactgctccccagcctgctggtggtgttcatgggcccgccgga
cgtcgcctgcacattgctcatcgtcgcagcccatctgagctgacacccttgatgagcatg
tttgccaaccctggaatggagcaattggctatccagcagcagatcgagcttctacagcag
caacagcagcagatccaggctactcatcagcagtatgtcaacatgggaatgattccaccc
ggccagcccatggcccataatggagcgttcaatcctttgcaatccatgggcaacatgtcg
caaaatgctttccagttccccaaccaaataccccaaaacgtttcaatggctcctcctgcc
cagccgctctcccatcgtcggaatcagtccgcccttcccaacatgggaatgggcccgcct
cctgctccatcggctggagcttccggcgctgcctttggcaacttcgaagccccgagcggc
cacaaccgagagaatagcagcgcccgaggtggaagaggtggtggtggtggtcaccagaga
cgccactccctggctcttgccgacgccaaaaaggccgccgagattgcccagcagaagcgc
acaacgaccggcttccagttccccggccccaacgccaccggtgataaggccgaagaggag
aataaaaccgcatctcaacccagtgtcgagggtcttgccccatcatctgcccttcgtggc
ggccgcggcggacatggtcgtagccagagcatggcagttaacggacgcggcgctgctacc
cgaggtaatttcagcatcggtggtgatgccgacttccagcgccgtggcggtggcggtggc
cacaatcgaactggttcgcgcagtttcgagggcaactggcgcactcaaagtcagaaccag
gagcagggtggcgctccccaatctcagagcttccagcccggacacaggtctcgcgcctct
atgaaccagtctgtgtcttccattggcgccttccagtacaaccctggaaacctccagctt
cctggacagatgatgatgccacagatgtacggtcagagcctgaactctgtccagcttagc
cagcttcaggctctccaggctgcgcaaatgagtggccagcaatttcaaggcctacaggcc
cagcagggcggccagcaacagcagcagcagcagcagcagcgcaagactttgttcacaccc
taccttccccaggcttcgctacccgcactcctcggagatggacagctcgtatctggtatc
ctccgtgtcaacaagaaaaatcgtagcgatgcctatgttacaacccaggacggccttctc
gacgctgatatcttcatctgcggttccaaggacagaaaccgtgctctcgagggcgatctt
gttgccattgagctccttgatgtcgacgaagtgtggtcccagaagcgtgagaaggaagag
aaaaagaagcgcaaggacattactgatacgcgctccaactcgaccaaccagggcaaccag
agttccaaccgtacggacgattctggcaacgtcgaaggtggtcttcgtcgtcgtggcagt
ctccgtcagcgccctacacagaagaagaacgacgacgttgaagttgagggccagagtctg
ctccttgttgaggaagaagagataaacgatgagcagaagcccctctatgctggtcatgtc
gtcgctgtcattgagcgtgtcgctggtcagatgttttcaggtactctcggccttcttcgt
cctagcagccaagctaccaaggagaagcaggaggccgagcgcgctgctcgtgatggcaac
agtggccgtaacgattctcggcatcaggaaaagcccaagatcgtctggtttaaacccacc
gacaagcgcgttcccctcatcgctatccccaccgagcaggcgcctcgcgactttgtcgag
aagcaccaggattatgccgaccgcatctttgtcgcttgtatcaagcgttggcccatcact
tcgctccatccctttggcacgctcgtggaacagcttggacctatgggagacctcaaggtc
gagacggacgcgcttctccgcgacaacaacttttcttccgatgaattctccgatgctgtt
ctgcgcagcgtaggccttcaggattgggatcttgccaaggaagacgaggcttctatctct
gctcgccgcgatttccgcgaggagcgagctttcactattgacttcaacggcggtgccgaa
ttaggtaatgccgtccacgtcaagacgcgccccgatggcaagattgagattggtattcac
gttcccgatattgcccacttcgtcaagcccaactcccttgtggaccgtgaggccaagaag
cgtggcacctctgtgcagctggtggaccgcttctgcgctcttctccctcccaagctggct
ggcgaggtctgctccattacccccgcagaggagcgtctggctgttagcgttgtcttcagc
gtcaacccccacaacggatctgttgctgagggtgatgcttgggttggaagaagtatcgtc
aacagtgtcggcaagttgtcgcttgcggacattgatgctgccgccgccgacgattctgcg
tacaagaaccaggccgttcccctcaagactgtcaagattctccaggctgttgctcaaaaa
ttccgcgaggctaggctaggtgccggtggcgagcccattgcgccccttcgcctgttccag
cagctcgatgacgagaaccagcctgttcagttcaacattttcgattccaccgagtctctg
gagcttgtggaggaactcatgcacaaggctaatgcgtacattgcgcaacgccttgctgaa
ggcctaccagaaaaggctctccttcgccgccagtctcctcccaaccctcgtcgacttcag
accttcggggagcgtatgaacgcgctgggctacgatgttgatgcatccggaagcggtgct
ctgcagaacagtctgttcaaggtggaagactctgaactccgtcagggtatggaaaccctg
gttgtgaagtctatgcagcgcgcgaaatactttattgcgggcaagactcccaagcagctg
tggcagcactactgcctgaaccttcctctctacacccatttcacaagcccaactcgtcgc
tacgcggatattgtggttcaccgccagcttgaggctgtcctctccgagggcaagattgag
tactcggaggagatggagagtcttgtcaagactgtcgagtcggccaacaccaagaaggag
tctgcccagaacgcccaggagcaaagcgtgcacatcgaggcttgccgcaagatggataag
ctgcgccaagacaccaacggcgatcttatcactgagggtatcgttgtctgtgtgtatgag
tctgcttttgatgttcttattcctgagtggggctttgagaaacgcgtgcactgcgatcag
ttgccgctgaagaaggccgagttccgaaaggagaagcgcgtccttgagctgtattgggag
aagggtgttcccagctctgcttacgtccctgaggacgagcgccccaaggctgccgcttcc
cagagaatgaccaacgccttggccgctgccaaacaggccgaagtggctgccaaagctaga
aaggagcgcgaggaggctactcgcaagcagactgagaccggcactatgtctaccgacgat
gttgatgctctgtttgatgatgacgaggaggacaacgtttcggatgtgactgaggctatg
gctggtgcttcccttggcgaccgccctacgcagagcgttcctagctcgcccgatcgctcc
gcttcggacgctgccgctcttcagcgcgctcgctctgactcgagaatgcccgcgggtgat
gctgttgagtcgcgtcttaccaacaaggagaaatacctgaagctgttcaagcttcgcgag
gaagatggcgagtacattcaggatgttacggagatgacaagggtgcctatcatcctgaag
acggatctcaccaagagcccaccgtaa
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integrated database retrieval system
