Cordyceps militaris: CCM_03440
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Entry
CCM_03440 CDS
T03108
Name
(RefSeq) tRNA-splicing endonuclease, putative
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_03440
Enzymes [BR:
cmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CCM_03440
5.6.2.5 RNA 5'-3' helicase
CCM_03440
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CCM_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_19
AAA_30
UvrD-helicase
Viral_helicase1
DUF883
AAA_22
Motif
Other DBs
NCBI-GeneID:
18165466
NCBI-ProteinID:
XP_006668654
UniProt:
G3JAQ3
LinkDB
All DBs
Position
Unknown
AA seq
2040 aa
AA seq
DB search
MSNVISEELGKWFDEFQAIPAETHLLCPKINDEDGENYRCLEDPDSAITRDEKEKRIEAG
NSRINITYWNSLIFGFDKKDAGKWLEEFTRRLDASLKGCSECVLNWHMRRKPQLQKFLER
WDEDATAQIQDLLNRIDNARIDENLTWAKNYIAKIENTGATFKKSEFGDNLGHVLITVYE
ALCCMNYMAQPDQRAAFQYVFMRLQGKSYLKLGTKDPLPGMTYFLFDNKNEDRRKWAHEN
WKNITSSSLTAKQFEWAIHDGLVSAIEDTWRKDLNQATPEQYLQIEQFWCGFEDIVRTLP
TALIASHVRNLEVSKSIYELLFAHLQFCRSEGVVVVAIRILTALLEKAPNVIWEVVGGAR
PNVIADLLFGSPIYKGLLRQSLEDCWDSPSQDSVPFATSWIIPWLKSINRDQRYDACEVL
MHTLFETLAKDASIGEPGQAACMRAGFDALALTLNTYLDMETASATSTVQLYINASFNLM
TKYKDLIIQQINPPKKQQSIEGWATFKVADSAHKLTEAAMKLDMKLFYEEYHAIHGSSKI
QSTVTRDSREFWTAIIEMYEASNDRVKLSKHILLSLAPICAVEQIRVRKAVGKLDQSSTA
FNESLKATADTISRIIGRIGDMDVMDLNSLFIERVPIQVIIGLSVHDESDLAESAAEVLK
GWTAEDTRSAAIGQLAQLHTEQTLASAVWSLDRVLKPPFPWGPIRPLLNANRSILRGLAE
ASTGVLRGGQLDSRQAATVLRWWNEQWRFVSKSCLNIESWSHYVPNAIMTEFCREIMELA
EALIAEDGLLTSATALGRSEADMMVKILAPAKDNFRGMENMIRLKDLWLVDVTVRVLCKI
LKRLRENNLEINAASRKLIVDACVPTVTPGKYLRSTNLSDQQRAELLQALGNTDDDVQII
QLSTADAKSAKDKIKKQSRIDAWSKSGSGSSSTSASSSTSKLSSNRQDVLDLSKSLSNPL
LSSIEARQKAKARVPDQRAISALKESRQREKAEKAKRDAEAIAKAKQLRGEPIGGPAGRS
EIMVNSSDEESDDSEDADEVDQLALLSGHGQTGIDEAEQRRLQALRNLARRPVKKVRQQR
SVKEMRARLIPPMDKLHNAILAWDIFHGGNDPPNGPKACKVDTRYPNPAAYRDTFFPLLA
SEAWRAFVTAKDEVTAQAFGIKITSRASVDSYLEITFTLEVALNRERGIGEGDILLVSED
ENPLNNPSARHCLARVHRLTYKKDRVEIIFRVTSRGNPLAVALIPNTMMNGIKITNMTTI
EREYAALESLQYFDLMDEILKAEPSPILKYGDERVTNYQSNWQLNRGQALSVLGAQENDG
FTLIQGPPGTGKTKTIVAMVGALLSGQLAQAPAKGTPVGVPVRPGVANQPAGSRPKKLLV
CAPSNAAVDELVTRLKRGITTISGKTKTINVLRLGRSDAISAAVKDVTLDELVRVRMQGD
SSKDKAKAIREKLHERASEIKEQLGILRPRLDEANEKEDQDARNKLLRQFDDLKREQRDI
GKQIEADRDSGNSAAREVEMKRRQIQQEILNNAHVLCATLSGSGHEMFRNLDVEFETVII
DEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPKS
VHLLDMQYRMHPEISLFPSKEFYEGQLRDGQDMAGLRQQPWHKSALLGPYRFFDVQGVQE
RGHRGQSLVNTRELEVALQMYDRFRKEYSECNLVGKIGIITPYKAQLFELRKRFRARYGE
DICDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGD
SRALVQGEFWKKLIEDAKSRDRFTQGDIVNMFRKPLERAKPGSITASPAPTPVDSPMTGG
SPASMATDGDTVMPDAYRPAPLKRSSEERTPIPTRPAAARYGPPAIQASTSLGDSKKRAL
NSPDRMDPVTKRIASDRPRGGGLAGKFGARPNRPLPKQPTDPSAMVTLGLAPPERPPPPR
ASVLPTQPTLPTRPTAPSGPSASSGSSGLSGSPGQTFQARPPPTGPRKKPKPSLFIPKRR
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtaatcagtgaggagctgggaaaatggttcgacgagtttcaggcaatcccc
gccgagacgcatctcctttgtccgaaaatcaacgacgaagacggcgaaaattacagatgc
ctcgaggatcctgactccgccattacccgggacgaaaaggaaaaacgcatagaggctggc
aatagccgtattaacatcacatactggaacagtctgatatttggcttcgacaagaaggac
gcgggcaagtggctcgaagaatttacaaggaggcttgatgcctcgctcaagggttgttcc
gagtgtgtcctgaactggcacatgaggcgcaaaccgcaattgcaaaaattcctcgagcgc
tgggacgaagatgctaccgctcaaattcaagacttgctcaatcgaatcgataatgcccga
atcgacgagaaccttacgtgggcgaaaaactatattgccaagatcgaaaacacaggcgcc
actttcaagaagtcagagttcggagataacttgggccacgtgctgatcaccgtctacgag
gcactatgctgcatgaattacatggctcaacccgaccagcgagccgcgtttcaatacgtc
tttatgcgtctccagggcaaaagttatctaaagctcggcaccaaggaccctttacctggc
atgacgtactttttgttcgataacaaaaatgaagatcgtcgaaaatgggcgcacgagaac
tggaaaaatattaccagctcttctcttactgcaaagcaatttgagtgggccatccacgat
ggactcgtcagtgccattgaagacacctggcgtaaagacctgaaccaggcgacacctgag
cagtaccttcagattgagcagttttggtgtggcttcgaggatatcgtgcgcacacttcct
accgccttgattgcttcccacgtgcgtaacttggaggtatccaagtctatctatgagctg
cttttcgcccaccttcaattctgtcgctcagaaggtgttgtagttgtcgcgattcgcata
ttgacagctcttcttgaaaaggcgcctaatgtcatctgggaagtggttggcggtgctcgt
cctaatgtcatcgctgacttgcttttcggaagcccaatctataaaggcttgcttcgccag
tctcttgaagattgttgggatagccccagccaagattcagtcccctttgccacatcctgg
atcataccgtggctgaaatccataaatcgtgaccagcgttacgatgcttgcgaagtttta
atgcatacgctctttgagacattggctaaggatgccagtatcggtgagcccggtcaagcg
gcgtgcatgcgagctggcttcgacgctcttgccttgactttgaacacatatttggacatg
gaaacagcctctgcaacctccacagtccagctttacatcaatgcatccttcaacctgatg
acgaagtacaaggaccttatcatacagcaaatcaacccacccaaaaaacagcaaagcata
gagggctgggctacgtttaaagtggccgattctgcgcacaaattgacagaggctgctatg
aagctggacatgaagctattctacgaagagtaccatgccattcacggtagcagcaaaatc
cagtcgactgttacacgagactccagggagttttggacagccatcattgaaatgtatgag
gcgtccaatgatcgcgtcaagctctccaagcatattctcctctcattggccccgatatgt
gctgtcgagcaaattcgagtacggaaagcggtgggcaagcttgatcagtcaagcacagcc
ttcaacgagtctctcaaggccactgccgacactatttcgagaatcatagggcgaattggt
gacatggatgtcatggacctcaacagcctctttattgaacgagtgcccattcaagtcatc
attggcctgtcagtccatgatgagtccgatctagcagagtctgccgctgaagtcctcaag
ggatggaccgccgaggatactcgctctgctgctattggacagcttgcgcagctgcacact
gagcagactctggcctctgccgtgtggtctttggatcgagttcttaagccaccgttcccc
tggggtccgatccgccccctgttgaacgccaatcgttccatcttgcgtggtcttgcggaa
gcctccactggtgtcttgcgaggcgggcaactagactctaggcaggctgctactgtcctc
cgctggtggaatgagcagtggcgttttgtttccaagtcgtgtctcaacattgagtcctgg
tctcattacgtaccaaacgccatcatgaccgagttctgccgtgaaataatggaacttgca
gaggctcttattgccgaagacggccttctcacctctgcaacagctcttggacgtagcgag
gcagacatgatggtcaagattctggctcctgccaaggacaactttcgtggcatggaaaac
atgattagactcaaggatctgtggctagtcgatgtcactgtgcgggttctttgcaagatt
ctgaagcgactccgcgaaaacaatctcgagatcaacgctgcctctcgaaagctgattgtc
gacgcatgcgtgccaactgtcacgccgggcaagtatctacgatctaccaatctaagcgac
cagcaacgcgccgaacttctgcaggctctcggaaatactgatgatgacgtgcaaataatc
caactcagcacagccgatgccaagtctgccaaggacaaaatcaagaagcagagtagaata
gatgcttggtctaagtctgggtctggatcatcgtcaacaagcgcatcttcatccacaagc
aagctcagctccaatcgccaggatgttttggaccttagcaagtctctcagcaaccctctg
ctcagttcaatcgaggccaggcaaaaagccaaggcgagagttccagatcagagggctatt
tctgcactcaaggaaagccggcaaagagaaaaggccgagaaagcaaagagagacgcagag
gccatcgccaaggccaagcagctccgtggcgagcctattggtggtcctgctggccgaagt
gaaatcatggtcaacagttctgatgaagaatctgacgacagcgaagatgccgacgaagtt
gaccagcttgctctgcttagtggtcatggacaaacgggaattgacgaggcagagcagcgt
cgcctgcaagccctgcgcaacttggcgcggcgccccgtcaagaaggttcgacagcaacga
tcagtcaaggaaatgagggcccgccttattccgcccatggataaattgcacaatgccatt
cttgcttgggacattttccatggcggaaatgacccccccaacgggcccaaggcttgcaag
gttgacacaagatatcccaacccggcagcctacagagatacattcttcccactccttgcc
tcggaagcctggagggcatttgtcactgcaaaagatgaagtgacggcgcaggcgtttggc
atcaaaattaccagccgagccagcgtggacagctatcttgagattacctttaccttggaa
gtcgccctgaacagagagcgaggcatcggtgaaggcgacattcttctcgtttctgaggat
gagaatccgctcaacaaccccagtgcccgccactgtctggctcgtgtgcatcgcttgacg
tataagaaggaccgtgtggaaattattttccgagtcacatcgcgcggcaatccccttgcg
gtcgcattgatacccaacaccatgatgaatggcatcaagattaccaacatgaccaccatt
gagcgagagtatgcggctctcgaatccctgcagtacttcgatctcatggacgagatcctc
aaggcagagccatctcctattctgaaatatggagacgaaagggttaccaactaccaaagc
aactggcagctcaaccgaggtcaagctctgtctgttttgggcgcacaggaaaacgacggg
ttcaccctcattcaaggtcctcccggtacgggtaaaaccaagaccattgttgccatggtc
ggtgcgctcttgtctgggcagcttgcgcaggcgcctgcaaagggcacacctgttggagtc
ccagttcggcccggggtggcaaaccagcctgctgggtcaaggcctaagaaactgctcgtc
tgtgcacccagtaacgcagctgttgacgaattggtaacccgcttgaaaaggggaatcacg
acaatcagcggcaagacaaagactatcaatgtcctccgtcttggtcgttccgatgccatc
agtgctgctgtcaaagacgttactctagacgagctagtccgcgtccgcatgcaaggcgat
tcgtctaaagataaggccaaggctatcagagaaaagctacatgaacgcgcaagcgagatc
aaggagcagctcggtattctgcggccgaggctggatgaggccaacgagaaggaggaccag
gacgctcgaaacaaacttttgcggcagtttgacgatctcaagcgcgagcaaagagatatt
ggcaagcagattgaggccgacagagacagcggcaactccgctgctcgagaggtggagatg
aagcgacgccagatccagcaggagattctcaacaacgcccacgtactatgcgccaccctc
agtggtagcggtcatgaaatgttccgaaacttggatgtggaattcgagacggtcattatt
gacgaggccgctcagtgtgttgagcttagtgccctaattccactcaagtacggctgctgc
aagtgtatcctagtcggagatccgaagcagctaccacctactgttctttcccagtcagcc
gctcgtttcggctacgatcagagtttgtttgtgcgtatgcagcaaaatcaccccaagtcg
gtccatctcctcgacatgcaataccgaatgcaccctgaaattagcttatttccgagcaaa
gaattttatgaagggcagctccgtgacgggcaggatatggccgggctgcgccagcagcct
tggcacaagagtgctctgcttgggccgtatcgtttctttgacgtgcagggtgtacaagag
cgtggccacaggggccagtcgctcgtcaatacacgcgaactcgaggttgctctacaaatg
tacgatcgcttccgcaaagaatacagcgagtgcaacttggtgggcaagattggtatcatc
acaccttataaagcccagttgtttgagctgcgaaagcgtttcagggcgcgatacggagaa
gacatctgcgacattattgaattcaacactaccgatgctttccagggtcgtgagtgcgag
attatcatcttttcatgcgtgcgagctagtgctactggaggtattggtttcatgacggat
attcgtcgtatgaacgtcggtttgacccgcgctaaatcgtcgttgtggattttgggagat
tctcgcgcgctggtgcagggtgagttctggaagaagctcattgaggatgccaagtcgaga
gaccgcttcacgcagggcgacattgtcaacatgttccgcaagcctctggagagggctaag
ccaggcagcatcacggcttctccggcgccgacacctgtggatagcccgatgactggtggc
tctcccgcatcaatggctacagacggtgatactgttatgccggatgcttatcgccctgcg
cccttgaagcgttccagcgaggaacgtaccccgataccgactcgaccagccgctgcccgg
tatggcccgcctgcgatacaagcatctacatcgctcggtgacagcaagaagagagcgctg
aatagtccagatcgtatggacccggtgaccaaaagaatcgctagcgaccggccccgtgga
ggaggactggctggtaaatttggcgcaaggcctaacaggccgctccccaaacagccgaca
gacccgagcgctatggtgactctgggcctggcgccaccagaacgtccgccgccacccagg
gcaagcgttctcccgacacagccaacattaccaacacggccaacggctccttcagggccg
tctgcatcatcaggttcctctggactgtccgggtcgcctgggcagactttccaagctaga
ccaccacctaccggaccacggaagaagcccaagccaagcctcttcataccaaagagacga
tga
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integrated database retrieval system
