Cordyceps militaris: CCM_03960
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Entry
CCM_03960 CDS
T03108
Name
(RefSeq) cohesin complex subunit (Psm1), putative
KO
K06636
structural maintenance of chromosome 1
Organism
cmt
Cordyceps militaris
Pathway
cmt04111
Cell cycle - yeast
cmt04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CCM_03960
04113 Meiosis - yeast
CCM_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmt03036
]
CCM_03960
Chromosome and associated proteins [BR:
cmt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CCM_03960
Meiosis-specific proteins
Cohesin complex and associated proteins
CCM_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
DNA_pol_lambd_f
DNA_pol_B_palm
TFIIE_alpha
AAA_21
AAA_29
HHH_8
NTP_transf_2
CENP-H
ATG16
HHH_5
SbcC_Walker_B
DNA_pol_B_thumb
Motif
Other DBs
NCBI-GeneID:
18165983
NCBI-ProteinID:
XP_006669171
UniProt:
G3JDB2
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MGKLNRLELFNFKSYKGHHTLLFGDSYFTSIIGPNGSGKSNSMDAISFVLGIKSSHLRSA
HLKDLVYRGRVLKTSKINDDGSAATNGTTQASDDKASRGDPKTAWVMAVYEDDSGEEHRW
KRSITNQGASEYRINDRSVTAQQYNAALESENILIKARNFLVFQGDVEAIASQSPQDLTR
LIEHISGSLEYKQEYETLQAAAEQAVENQNFQLHRRRGINSEIKQYREQKREADNFQKKM
DEKDAAIVTQCLWKLFHFQKAMDESSAAIHSHHEDLKELRRNVESYEGQLEAARREQISV
SRRVGRVDREIRQKERSIEDRENALVPFDEKIHESAQQVDRLQSQSQKVAKERDEQADIV
QKVQHDVESVNKAQSIFEKTIEEQMQKQGGAISDTDRKEYNMLRSEVIARSGTDHTKLEN
LERQRKADEVTVNNLKGKVDSIAAAISKTESELSSVGERKDAVESVAKDLSSEIAAKKKE
FNQLQSERVRTNQKRTELEEKLEDVAKKLREADDGRRQNDREARLKDMVASLRRIFPGVR
GRIGDLCTPKQKKYDEAIIVALGRDFDSVVVDTEKTGVDCVQYLKEQRFAPMTFIPLDNI
KVNAVNTSVKGITGARLAIDTINFDSSVERALSYACGSSVVCETLDIAKHICYAKKIPVK
AVTLEGYVIHKAGLMTGGRGPEPKGGKRKFEEADVQNLQRMATKLKEEIDRLPRADRRGS
KEEALQIELGALERRVKATKEELIVFQENFSSKKRELENQKKQLREILPKYKEQTKQFES
TTSTVQQFQSAIGKVEDQIFSSFCKRLGYDDIRAFDASQGKLEQEVSEKRNQYEVQKQRL
ESRLKWEAARHGDTESRIKRMHEQIKRLEQDMQGYTREKANIETEMREEQDELEALRETL
DEHQADLAEKTERVNEAKTEVQQRGKDIEALLKSINALETTLQKNSAGKSGLLRRCRLEQ
IQVPLAEGALDNLPNEDDLLRQDPDAMDVDAEGEEMVDFALDDHGIEINFDVLDDELKQS
DDSTMDDSLTERIANLTTELEKLNPNMRAMERLEGVETRLKQTDQEYEDSKSAAQEAKEA
FGNVKQKRYEIFNNAFTHIQEQISHVYKDLTRSDAYPLGGQAYLDIEEDTDMPYLSGIKY
HAMPPLKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDAALDNANVDKIKKY
IREHAGPGMQFIVISLKTGLFQDSESLVGVYRDQEVNSSRTLTLDMQMPVHTRSSEIDDE
YQPVLVPKYLSTWARCSRPPNVPTFISATRQVALSRHKSAIAGQTSASQNRRPSGCMNRS
EDVAAEPFRPSKKLSGDITIYMVEPSPYSAGNSYNIDDSMDLAVTLVKSVMRAFYSTRDV
LVIDALILHEALRDDDLAYLMATNPKDLHKICGKLREDRFLTVHTRPELREGNPRPSNRT
WYYINYRHTIDAIKWRVYTIDKDVQGTTERTSEKKEYVCSFCKAEWSPLEVLDSHGPNGF
LCHRCGHVLAFEADRNAGGHEQSTRLNDQFKFISELLQRIDNVHIPECDFDRALAKARPV
VRDATHQVAATMPMDSSMNRPMAVKGLANTGPQSISVNISTVEGASEAEKEAEIARREKL
AAQNALPAWMSNSTVTGESFAGATGTGHTIVNNEVGPIDDSKHKQVDSKAIAQLDDVFET
LKAAQRRQDDSDDEEGSEEDEDDFENVPATCNNSGLSISVLNQSIKRDPSEELSRDGFGL
EQHRRKKAKIQPDVKIEGKVDESGEDDDEDDIQFEDAYAPLVAFYQTAGMRYECRVGTHQ
TQPRILTLLFSLWQKIGMMPLPLPVIFLLPTQLTPTELHDLEASIPTLTYDINEAEVVLG
RVSREQRAQFELRRLKLETEPIERGTARDDSAQSEGSDERHSKRRKLEAHAPTSKPDSSL
VRVLSLSWLTESLEKGTLLPMSSYTVYEGRKSGRITSKLPNDSANLDKRIPKDVLTCTAN
DNTESGTLSNQRNKEKEKEIEKERGLMTDSSAAGVMARPGLIRQSTSEHDIHLPLTPSYL
YTTYSCQRPTPMNPPNDAFIEELKNIRTLRLLQGDKIGIRAYSTSIASLAAYPYKIQTPQ
GTSICWFSFIAELYQEWHATGQTEETRKSKEDTEIQVLRTFYNIWGVGDANAREFYQKGW
RDLDDIVEYGWQSLSRVQQIGVKYYDDFQEKINREEVARIANIILNHARRLDHGYEMAVV
GGYRRGRDENGDIDVLLTHREELKTFKLVERLVLSLESEKYISHTLSLSTRNSERGQVPL
PWKGEGSTWGTGFDTLDKAMVVWLDPEEAHALHRRVDIIVSPWKTIGCAMLGWSGETTFQ
RDLRRYLEFATEGTVAGLTLSAVM
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctcaatcgactggaactgttcaatttcaagtcctacaaagggcatcacacc
cttctgtttggcgattcgtattttacatcgattattggacccaatgggtctggaaagtcg
aactccatggatgctatttccttcgttctgggaataaaatcatcccaccttcgatccgca
catctcaaggacttggtctaccgaggccgagtccttaaaacatctaaaatcaatgacgat
ggatctgccgcaacgaatggaacaacacaagcaagcgatgacaaggcctctcggggcgac
ccgaaaactgcatgggttatggctgtgtatgaagatgatagtggcgaggaacatagatgg
aaacgttccatcacgaaccaaggcgcaagtgaatatcgcatcaatgaccgaagtgttact
gcgcagcagtacaatgcagctctggaaagtgaaaacattcttatcaaagcaagaaatttt
ctggttttccaaggagatgtggaggcaattgcatctcaatcccctcaggatcttacacgc
ctgattgaacatatctctggaagcctggaatacaagcaagaatatgagactcttcaggct
gcggcagagcaggcagtggagaaccaaaactttcaacttcacaggcgacgcggcatcaat
tcagaaatcaagcaataccgcgagcaaaagagagaggctgacaatttccaaaagaagatg
gacgagaaagatgccgccattgtgacgcagtgcctctggaagctatttcattttcagaaa
gctatggatgaatctagcgcggccatccacagccaccatgaagatttgaaagaattgcgt
cgcaatgtcgaatcttacgaaggacaactcgaagctgcgcgccgagaacaaatatcagta
tcgcgacgcgttggtagggtagaccgagaaattcgacaaaaagagcgctcgatcgaggat
cgcgaaaatgcgctggtgccatttgatgaaaaaattcatgagtcagcgcagcaagtcgat
cgactgcaatctcaaagtcagaaagttgcaaaagagcgtgacgagcaggcggacattgtg
caaaaggtacagcatgatgtcgaaagcgtcaacaaagctcaatccatcttcgaaaaaact
atcgaagagcagatgcagaagcaaggcggagcaatcagtgatacggatcgcaaggagtac
aacatgcttcgcagcgaagtcattgcccgctctggcacagatcataccaagctggaaaac
ctggagagacaacgcaaggccgacgaagtcacagtcaacaacttaaaaggcaaggtagac
agcattgctgcggccatctccaaaaccgaatctgagctcagcagtgtgggagagaggaaa
gatgccgtggaatcggttgccaaggatctttccagtgaaatagccgctaagaagaaagaa
ttcaaccagctccagtcggagcgtgtccgtaccaaccaaaaaaggacagaacttgaagaa
aagctggaggatgttgccaagaagcttcgtgaggctgacgatggccgtcgccaaaatgac
cgggaagcgcgcttgaaagacatggttgcttccctgcggcgcatcttccccggtgtacgc
ggcagaatcggcgatttgtgcactccgaagcaaaagaaatatgatgaggctatcattgtg
gccttgggaagggactttgactcggttgttgttgatacagaaaagacaggcgttgactgt
gttcaatatctaaaggaacagcggttcgcgccaatgaccttcattcctctggacaatatt
aaggtcaatgctgtcaacacgtctgtcaagggtattactggagctagactcgctatcgac
acgatcaactttgactcttctgtcgaacgtgcgttgtcttacgcatgtgggagttctgtg
gtttgcgaaactctagacatcgctaagcacatttgctatgcgaaaaagatccctgtgaag
gcggtcactttagaaggctatgtcattcacaaagctggtcttatgactggtggccgtggg
ccagaacccaagggaggcaagcgcaagttcgaagaagcagacgttcaaaacctccaaaga
atggccacaaaactaaaagaggaaattgatcgtctcccgagagctgatcgacgtggcagc
aaagaggaagctctccagattgagctcggtgccttggagcgccgtgttaaagctaccaaa
gaagagcttatcgtttttcaggaaaatttctccagcaagaagcgagagctagagaatcag
aagaaacagctccgggaaatcctgccgaaatacaaagagcaaacaaagcaattcgagagc
acaacatccaccgtacaacagtttcaaagcgcaatcggcaaggtcgaagatcaaattttt
tccagcttctgtaagcgactgggatacgacgacattcgtgccttcgatgcctctcaagga
aagctagagcaagaggtctcggagaagagaaatcagtatgaggttcaaaagcagcgtctc
gaaagccgcctcaagtgggaggcagctcgacacggtgatactgagtcccgtatcaagaga
atgcatgagcagatcaagcgcttggaacaagacatgcaaggctatacccgggagaaggca
aatattgaaacggagatgcgcgaagaacaagacgagcttgaagctcttagggagactctg
gatgagcaccaagccgaccttgctgagaagaccgagcgtgtcaacgaggccaagactgaa
gtacaacaacgtggcaaggatatcgaggccctgctcaagagtataaatgctctagaaacc
acgctgcaaaagaacagtgctggcaagtctgggctacttcggagatgtcgtcttgagcaa
attcaggttcctctcgcggaaggcgcgctggacaacttaccgaatgaagacgacttgctg
cgccaggacccagatgccatggacgtcgatgctgaaggtgaagaaatggtcgattttgcg
ctggacgaccatggaatcgaaatcaacttcgatgtcttggacgatgaactcaaacagtct
gatgactcgaccatggatgattctctcacagagcgcatcgcaaatttgacgacggagctg
gagaagctaaaccccaatatgcgcgccatggaacgactggagggtgttgaaactcgcttg
aaacaaaccgatcaagaatacgaagactcgaaatctgctgcccaggaggcgaaagaggct
tttggcaatgtcaaacagaaacgttacgaaatcttcaacaacgcattcacacatatccag
gaacagatctcacatgtctacaaggacctcacccgctcagatgcttaccctttgggtggt
caggcttatttggacatcgaggaagatacagacatgccatacttgtcgggcatcaaatac
catgccatgccccccctgaaaagattccgcgacatggaacacctttccggtggcgagaag
accatggctgcactggcacttctctttgctattcacagctaccagcccagcccattcttc
gttctcgacgaagttgatgcagcgttggacaatgctaatgtggacaagatcaagaagtac
atccgcgagcatgctggtcctggcatgcagttcattgtcattagcttgaagaccgggtta
ttccaagatagtgagagcttggtaggagtctatcgagaccaagaagtcaacagctcgaga
acattgacattggatatgcagatgccagtacacacccgaagttcagagatagatgatgaa
taccaaccagtattggtaccgaagtatctatctacctgggcaagatgttccaggcctcct
aatgtacccacttttattagtgcaacaaggcaagttgccctttctcgtcacaaatcagca
atagctgggcaaacatcggcgtcccaaaatcggcgaccctctggctgcatgaaccgaagc
gaagacgtggcggccgagccatttcgaccgagcaaaaagcttagcggcgacatcacgatc
tacatggtagagccgtctccgtattctgcaggcaatagctacaatatcgatgactctatg
gatctcgcagtcacacttgtcaagtcggtgatgcgagcgttctactcaactcgagacgtt
ctagtgatagacgcacttatccttcacgaggctcttcgcgacgatgacctggcctacttg
atggccacgaacccgaaagatctccataaaatttgcggaaagcttcgagaagatagattc
ttgactgtgcatacgcgaccagaacttcgagaaggaaacccacggccgagtaatcgcaca
tggtactacattaattatcgccacaccattgatgccatcaaatggcgcgtgtacacaatc
gacaaagatgtccaagggaccacggagaggaccagcgagaagaaagaatatgtttgctcg
ttctgtaaggcggaatggtcgcccttggaggtgctagacagccatggcccgaacgggttc
ttatgccaccgctgcggccatgtccttgcttttgaagcagatcgcaatgctgggggtcat
gagcaatccacgcgactcaacgatcaatttaagttcatcagcgagcttctacaacgaatc
gacaatgtacacataccggagtgtgattttgatcgcgctctcgcgaaggctcgaccggtg
gtccgtgacgccacgcatcaagttgcggcaacgatgcccatggattcgagcatgaacaga
ccaatggccgtaaagggactggcaaacacgggcccgcaatccatctctgtcaatatatcg
actgttgagggtgcatcagaagcagaaaaggaggccgaaatcgcgcgccgggagaagctg
gcggcccagaatgcactgcccgcgtggatgtccaacagcactgttactggcgaatctttt
gcgggtgctactggaacaggacataccatcgtcaataatgaagttggaccgattgacgat
tcaaaacataagcaagtggacagcaaggctatcgcccaactcgatgatgttttcgaaact
ctgaaagctgcgcaaaggcggcaagatgattccgacgacgaggagggctctgaagaggac
gaagacgatttcgaaaatgtgccggctacttgcaataattcaggtttgagtatatcggtg
ctaaaccagtcgataaagcgagatccatccgaggagctgtctagggatggatttgggctg
gaacaacaccgcagaaaaaaggccaaaatccaacctgacgtcaaaattgaaggcaaggtt
gacgagagtggagaggatgatgatgaagatgatattcagtttgaagacgcgtatgctcca
cttgtggctttctaccaaaccgcaggtatgaggtatgaatgccgagttggcacgcaccaa
acgcagcctcgaatcctgacgcttctcttttccctttggcagaagattggcatgatgccg
cttccactgccggtcatttttctcctaccgacgcaattgacgcctacagagttgcacgat
ctcgaggcgagtatcccaactctgacttacgatattaatgaagcggaagtagtgcttggt
agagtatcgcgcgaacaacgtgctcagtttgaattgcgccggttgaagctagagactgag
cccatcgaacgtggtacggcaagggatgactcggctcagagtgagggctctgatgagcgt
cactcgaagcgccgaaagctagaagcgcatgcgccgacttccaaaccagacagctctctt
gtaagagttctgagtttgtcatggctcaccgaatctctggagaaaggcacccttctgccg
atgtcaagttataccgtgtatgaaggcagaaaaagtggccgcatcacatcaaagctaccc
aatgattcagccaatttggacaagagaattcctaaggatgtcctaacgtgcactgcaaat
gataatacagagtcgggaactttgtcaaatcagcgcaataaagaaaaagaaaaagaaatt
gaaaaagaaaggggtttaatgaccgattcctcggcagcaggtgttatggcaagaccaggt
ttgatccgtcaatctacatcagagcacgatatacatcttcctcttactccaagctacctc
tacacaacttattcatgtcaacgacctactccgatgaatccacccaatgatgctttcatt
gaggaactgaagaacatccgaacacttcgtcttttgcagggtgataaaatcggaattcga
gcctattcgacatcgatagcctcactagcggcgtatccatacaagatacagactcctcaa
ggtacctccatttgctggttctcgtttattgccgagctgtatcaggagtggcacgcaacg
gggcaaaccgaggagacgcgcaaatctaaagaagatacagagattcaagtgttgagaacg
ttttacaacatttggggggtaggtgatgcaaatgcaagagagttctaccaaaagggatgg
cgggacttagacgacattgtggaatatggttggcaatcgcttagccgcgttcaacaaatt
ggagtcaagtattacgatgattttcaggagaagataaaccgcgaggaggtcgctagaatc
gcgaacattatcttgaaccacgctcgtcgattggatcacggatatgagatggctgttgtg
ggtggctatcggagaggtcgggacgaaaatggcgatattgatgttcttttgacacacaga
gaggagctaaagacgttcaagctggttgaacgtctcgttctgagcctcgaaagcgaaaag
tacatttcacacacgctgagtctgtcgacaaggaacagcgaacgaggacaagtacctctt
ccgtggaaaggagaagggagcacctggggcacggggtttgacactcttgacaaagccatg
gtcgtgtggctcgacccagaagaggcgcacgcgctgcaccgacgcgtcgatattattgtc
agcccgtggaagacgattggatgcgccatgttgggctggagcggcgaaacgacgtttcaa
cgagacctccgaagatacttggaattcgcaaccgagggaacggtagctgggttgaccttg
agtgcggtgatgtga
DBGET
integrated database retrieval system
