Cordyceps militaris: CCM_04364
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Entry
CCM_04364 CDS
T03108
Name
(RefSeq) TFIIH and nucleotide excision repair factor 3 complexes subunit (Tfb2), putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cmt
Cordyceps militaris
Pathway
cmt03022
Basal transcription factors
cmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCM_04364
09124 Replication and repair
03420 Nucleotide excision repair
CCM_04364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmt03021
]
CCM_04364
03400 DNA repair and recombination proteins [BR:
cmt03400
]
CCM_04364
Transcription machinery [BR:
cmt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CCM_04364
DNA repair and recombination proteins [BR:
cmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CCM_04364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
18166387
NCBI-ProteinID:
XP_006669575
UniProt:
G3JEH9
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MAANTQPAMQLADYLEKLPGTTFRKLYQQPSTAFAIFRRMLPHLAKTIVMRMLYMSGPMS
LADLDAWVKPEAKRQKDQMLSTLRSLHIVQISAPAKDKTQEVQLTTNFRTSMRLALTGGG
NHNSFGVPSSLTVPPEIDAPFLDRYARRRWDEILHFVVSSVGFKSTATTAAGGEGGGGGG
PNKSVRDILIAGRLVDRRPSGSVGITQAGFTFLLQEANAQVWTLLLLWLDAQDADKNAAV
DTLSFLFMLASLEPGRAYDTHALSEQRRDMLPALADFGLVYIPPQKRSMFFPTRLATTLT
SGASSGLRSISDGVAAATSAARSSPSSSAHQPASSSAGSGPLGGGSGDQPGAVVIETNYR
LYAYTQSTLQIAVLALFARLTMRFPDMVAGRLTRTSIRQAIQFGITADQIIAYLAAHAHE
QMHRTAALTNKPVLPPTVVDQIRLWQLENERMKTTPGFLFRDFDDPKEYHDTRRFADEIG
VLVWSDDKKGLFFASKFEQIRDYLKSRKKAE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacacgcagccggcgatgcagctggccgactacctcgagaagctgccggga
acgacctttagaaagctctaccagcagccctcgacagcctttgccattttccggcgcatg
ctgccgcacctggccaaaaccattgtgatgcgcatgttgtacatgtccggccccatgagc
ctggctgacctggacgcctgggtcaagcccgaagcgaaaagacaaaaagaccaaatgctc
tcgacgctccgcagcctgcacattgtgcaaatctccgcgcccgccaaggacaagacgcaa
gaagtccagctcacgaccaacttccgcacctcgatgcgcctcgccctcacgggcggcggc
aaccacaactcgtttggcgtgccctcgtcgctcaccgtcccccccgaaatcgacgctccc
tttctagaccggtacgcgcgccgccgctgggacgagatcctccactttgtcgtgtcctcg
gtcggctttaaaagcaccgctacgacggcagccggcggcgagggtggtggcggcggcggc
cccaacaagagcgtccgcgacatcctcatcgccgggcgcctcgtcgaccgccgccccagc
ggctccgtcggcatcacgcaggccggcttcacctttctcctgcaagaggccaacgcgcag
gtctggacgctgctgctgctctggctcgacgcgcaagacgccgataagaacgcggccgtc
gacacgctctcgtttctcttcatgctcgccagtctcgagcccggccgcgcctacgacacc
cacgccctctcggagcagcgccgcgacatgctccccgccctcgccgacttcggcctcgtc
tacatcccgccccagaagcgctccatgttcttccccacgcgcctcgccaccacgctcacc
agcggcgccagcagcggcctgcggagcatcagcgacggcgtcgccgccgccacctcggcc
gcgcgctcctccccctcctcctccgcccaccagccggcatcatccagcgctggcagtggc
cccctcgggggcggctccggcgaccagcccggcgccgtcgtcatcgagaccaactatcgg
ttgtacgcgtacacgcagtcgacgctgcagattgccgtgctcgccctctttgcgcgcctc
accatgcgcttccccgacatggtcgccggccgcctcacgcgcacctcgatccggcaggcc
atccagtttggcatcaccgccgaccaaatcattgcctacctcgccgcccacgcccacgag
cagatgcaccgcaccgccgccctcaccaacaagcccgtcctgcccccgaccgtcgtcgac
cagattcgcctctggcagctcgagaatgagcgcatgaagaccacccccggcttcctcttt
cgcgactttgacgaccccaaggagtaccatgatacacggcgcttcgccgatgaaattggt
gtcctcgtctggagcgacgacaagaagggtctgttctttgccagcaagtttgagcagatt
agggattacctcaagagtaggaaaaaggccgaataa
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