KEGG   Cordyceps militaris: CCM_04417
Entry
CCM_04417         CDS       T03108                                 
Name
(RefSeq) U3 small nucleolar RNA associated protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
cmt  Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:cmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmt03009]
    CCM_04417
   04121 Ubiquitin system [BR:cmt04121]
    CCM_04417
Ribosome biogenesis [BR:cmt03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CCM_04417
Ubiquitin system [BR:cmt04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CCM_04417
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 18166440
NCBI-ProteinID: XP_006669628
UniProt: G3JET6
LinkDB
Position
Unknown
AA seq 445 aa
MKVKAISRSVAAQHAPGSDAPRQSRNLDPALHPFERAREYKRALNAVKLERLHASPFIAQ
LGRGHVDGVYSMAKDPNSLDHFASGSGDGVVKVFNLATKEEAWHTTAHENIVKGMTWTLD
RKLLTCAADRTVKLFDPYHTPSGAAPLSSWLGAGAFTSLSHHRSRAAFAAASSVISIYDL
ERHTAAPEMLRWPTSTDTITDVAFNQVETSILASCATDRSIVLYDLRTSTPVAKTVLKFA
TNRVAWSPMEAFNLATASEDHNAYLFDMRRFDRALNVFKDHVAAILDVEFSPTGLELVTA
SWDRTVRLWRREDGHSRDVYHTKRMQRVMAARWTPDAQYVLSGSDDGNVRLWRAKASARQ
GMKSSRQRQALEYNDALVERYGHMPEIRRISRHRHVPEVVKKAASIKKDELQSIKRKEEN
ERKHTKKQFEKRQSERQKMILSREK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaggtcaaggccatcagccggtcggtggccgcacaacatgcacctggctccgacgcc
cccaggcagtctcgcaacctcgacccggcgctgcacccgtttgagcgcgcccgcgagtac
aagcgtgccctcaacgccgtcaagctcgagcgcttgcacgcgtcgcccttcatcgcccag
ctcggccgcggccacgtcgacggcgtctactccatggccaaggaccccaactcgctcgac
cactttgcgagtggcagtggcgacggcgtggtcaaggtcttcaacctggcgaccaaggag
gaggcgtggcacacgacagcacacgagaacatcgtcaagggcatgacctggacgctcgac
cggaagctgctgacctgcgcggcggatcgcaccgtcaagctgtttgacccgtaccacacg
ccgagcggcgcggccccgctgtcctcgtggctcggcgccggcgcgttcacgtcgctgtcg
caccaccgctcgcgcgcggcctttgctgcggcgtcgagcgtcatttcgatctacgacttg
gagcggcacacggcggcgcccgagatgctcaggtggccgacgtcgaccgacaccatcacc
gacgtggcgttcaaccaggtcgagacgtcgatcctggcgtcgtgcgcgacggaccgctct
atcgtgctgtacgacctgcgcacgtccacccccgtcgccaagacggtgctcaaatttgcc
accaaccgcgtggcgtggtcgccaatggaggccttcaacctcgcgaccgcgtccgaggac
cacaacgcgtacctctttgacatgcggcgcttcgaccgcgccctcaacgtcttcaaggac
cacgtcgccgccatcctggacgtcgagttctccccgaccggcctggagctcgtgacggcg
tcctgggaccgcaccgtgcgcctctggcgccgcgaggacggccactcgcgcgacgtctac
cacaccaagcgcatgcagcgcgtcatggccgcccgctggaccccggacgcgcagtacgtg
ctgtccggctccgacgacggcaacgtgcggctgtggcgcgccaaggcgtcggcgcgccag
ggcatgaagtcgtcgcgccagcgccaggcgctcgagtacaatgacgcgctggtcgaacgc
tacgggcacatgcccgagattcgccgcatcagccgccacaggcacgtccctgaggtggtc
aagaaggcggctagcatcaagaaggacgagctccagagcatcaagcgcaaggaggagaat
gagcgcaagcacaccaagaagcagtttgagaagaggcagagcgagagacagaagatgatc
ttgtcgagggaaaaataa

DBGET integrated database retrieval system